Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNYL3P0C7X3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNYL3P0C7X3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 AC112907.2-201ENST00000448639 330 ntBASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
CCNYL3P0C7X3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 STARP1-201ENST00000397973 869 ntBASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 VENTXP5-201ENST00000523979 775 ntBASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 GCSHP2-201ENST00000560971 527 ntBASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCNYL3P0C7X3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms