RNA–Protein interactions for RNA: ENST00000449298.1

AL390860.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL390860.1, Length 1,541 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390860.1-201ENST00000449298 NISCHQ9Y2I1 1504 aa44.83■■■■■ 4.77
AL390860.1-201ENST00000449298 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.89
AL390860.1-201ENST00000449298 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
AL390860.1-201ENST00000449298 ABCC9O60706 1549 aa37.54■■■■□ 3.6
AL390860.1-201ENST00000449298 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
AL390860.1-201ENST00000449298 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
AL390860.1-201ENST00000449298 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
AL390860.1-201ENST00000449298 NACADO15069 1562 aa36.73■■■■□ 3.47
AL390860.1-201ENST00000449298 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.43
AL390860.1-201ENST00000449298 SHROOM4Q9ULL8 1493 aa36.12■■■■□ 3.37
AL390860.1-201ENST00000449298 SCRIBQ14160 1630 aa36.03■■■■□ 3.36
AL390860.1-201ENST00000449298 UNC13AQ9UPW8 1703 aa35.74■■■■□ 3.31
AL390860.1-201ENST00000449298 BICRAQ9NZM4 1560 aa35.46■■■■□ 3.27
AL390860.1-201ENST00000449298 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
AL390860.1-201ENST00000449298 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
AL390860.1-201ENST00000449298 BAZ1AQ9NRL2 1556 aaPredicted RBP34.65■■■■□ 3.14
AL390860.1-201ENST00000449298 MROH2BQ7Z745 1585 aa34.61■■■■□ 3.13
AL390860.1-201ENST00000449298 RSF1Q96T23 1441 aaPredicted RBP34.6■■■■□ 3.13
AL390860.1-201ENST00000449298 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
AL390860.1-201ENST00000449298 SUPT5HO00267 1087 aaKnown RBP34.51■■■■□ 3.12
AL390860.1-201ENST00000449298 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
AL390860.1-201ENST00000449298 WIZO95785 1651 aa34.27■■■■□ 3.08
AL390860.1-201ENST00000449298 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
AL390860.1-201ENST00000449298 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
AL390860.1-201ENST00000449298 SMARCA2P51531 1590 aa34.07■■■■□ 3.04
AL390860.1-201ENST00000449298 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
AL390860.1-201ENST00000449298 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
AL390860.1-201ENST00000449298 NCAPD3P42695 1498 aa33.92■■■■□ 3.02
AL390860.1-201ENST00000449298 BAZ1BQ9UIG0 1483 aaKnown RBP33.86■■■■□ 3.01
AL390860.1-201ENST00000449298 HMGXB3Q12766 1538 aa33.82■■■■□ 3.01
AL390860.1-201ENST00000449298 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
AL390860.1-201ENST00000449298 DNAJC5BQ9UF47 199 aa33.58■■■□□ 2.97
AL390860.1-201ENST00000449298 CFTRP13569 1480 aa33.03■■■□□ 2.88
AL390860.1-201ENST00000449298 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
AL390860.1-201ENST00000449298 CHIC1Q5VXU3 224 aa32.87■■■□□ 2.85
AL390860.1-201ENST00000449298 NESP48681 1621 aa32.83■■■□□ 2.85
AL390860.1-201ENST00000449298 LAMC3Q9Y6N6 1575 aa32.83■■■□□ 2.85
AL390860.1-201ENST00000449298 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
AL390860.1-201ENST00000449298 ABCC8Q09428 1581 aa32.68■■■□□ 2.82
AL390860.1-201ENST00000449298 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
AL390860.1-201ENST00000449298 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
AL390860.1-201ENST00000449298 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
AL390860.1-201ENST00000449298 TRIM41Q8WV44 630 aa32.51■■■□□ 2.8
AL390860.1-201ENST00000449298 CEP164Q9UPV0 1460 aa32.44■■■□□ 2.78
AL390860.1-201ENST00000449298 SYNJ1O43426 1573 aa32.44■■■□□ 2.78
AL390860.1-201ENST00000449298 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
AL390860.1-201ENST00000449298 CUX1P39880 1505 aa32.39■■■□□ 2.78
AL390860.1-201ENST00000449298 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
AL390860.1-201ENST00000449298 BIVM-ERCC5R4GMW8 1640 aa32.34■■■□□ 2.77
AL390860.1-201ENST00000449298 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
AL390860.1-201ENST00000449298 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
AL390860.1-201ENST00000449298 TOPBP1Q92547 1522 aa32.22■■■□□ 2.75
AL390860.1-201ENST00000449298 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
AL390860.1-201ENST00000449298 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
AL390860.1-201ENST00000449298 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
AL390860.1-201ENST00000449298 THOC2Q8NI27 1593 aaKnown RBP32.05■■■□□ 2.72
AL390860.1-201ENST00000449298 WDR62O43379 1518 aa32.05■■■□□ 2.72
AL390860.1-201ENST00000449298 POLA1P09884 1462 aaPredicted RBP32.02■■■□□ 2.72
AL390860.1-201ENST00000449298 SOGA1O94964 1423 aa31.99■■■□□ 2.71
AL390860.1-201ENST00000449298 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
AL390860.1-201ENST00000449298 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
AL390860.1-201ENST00000449298 FAM9AQ8IZU1 332 aaPredicted RBP31.86■■■□□ 2.69
AL390860.1-201ENST00000449298 EEA1Q15075 1411 aa31.84■■■□□ 2.69
AL390860.1-201ENST00000449298 CUX2O14529 1486 aa31.84■■■□□ 2.69
AL390860.1-201ENST00000449298 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
AL390860.1-201ENST00000449298 TARBP1Q13395 1621 aaKnown RBP31.79■■■□□ 2.68
AL390860.1-201ENST00000449298 WDR97A6NE52 1622 aa31.76■■■□□ 2.68
AL390860.1-201ENST00000449298 KIF27Q86VH2 1401 aa31.76■■■□□ 2.68
AL390860.1-201ENST00000449298 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
AL390860.1-201ENST00000449298 CSRNP3Q8WYN3 585 aa31.7■■■□□ 2.66
AL390860.1-201ENST00000449298 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
AL390860.1-201ENST00000449298 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
AL390860.1-201ENST00000449298 IGF1RP08069 1367 aa31.56■■■□□ 2.64
AL390860.1-201ENST00000449298 ZNF608Q9ULD9 1512 aaPredicted RBP31.55■■■□□ 2.64
AL390860.1-201ENST00000449298 LOC105371045A0A1W2PR82 267 aa31.54■■■□□ 2.64
AL390860.1-201ENST00000449298 GAPVD1Q14C86 1478 aa31.54■■■□□ 2.64
AL390860.1-201ENST00000449298 AQRO60306 1485 aaKnown RBP eCLIP31.5■■■□□ 2.63
AL390860.1-201ENST00000449298 PRXQ9BXM0 1461 aa31.47■■■□□ 2.63
AL390860.1-201ENST00000449298 KIF21BO75037 1637 aa31.46■■■□□ 2.63
AL390860.1-201ENST00000449298 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
AL390860.1-201ENST00000449298 EIF4G3O43432 1585 aaKnown RBP31.42■■■□□ 2.62
AL390860.1-201ENST00000449298 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
AL390860.1-201ENST00000449298 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
AL390860.1-201ENST00000449298 EHMT2Q96KQ7 1210 aa31.38■■■□□ 2.61
AL390860.1-201ENST00000449298 CARMIL1Q5VZK9 1371 aa31.37■■■□□ 2.61
AL390860.1-201ENST00000449298 GOLGA3Q08378 1498 aa31.37■■■□□ 2.61
AL390860.1-201ENST00000449298 RAPGEF2Q9Y4G8 1499 aa31.36■■■□□ 2.61
AL390860.1-201ENST00000449298 CUL7Q14999 1698 aa31.34■■■□□ 2.61
AL390860.1-201ENST00000449298 ADAMTS12P58397 1594 aa31.21■■■□□ 2.59
AL390860.1-201ENST00000449298 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
AL390860.1-201ENST00000449298 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
AL390860.1-201ENST00000449298 TNIKQ9UKE5 1360 aa31.2■■■□□ 2.58
AL390860.1-201ENST00000449298 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
AL390860.1-201ENST00000449298 MAGI1Q96QZ7 1491 aaPredicted RBP31.17■■■□□ 2.58
AL390860.1-201ENST00000449298 SYNJ2O15056 1496 aa31.05■■■□□ 2.56
AL390860.1-201ENST00000449298 GRIN2AQ12879 1464 aa30.99■■■□□ 2.55
AL390860.1-201ENST00000449298 CEP162Q5TB80 1403 aa30.96■■■□□ 2.55
AL390860.1-201ENST00000449298 CHMP7Q8WUX9 453 aaPredicted RBP30.94■■■□□ 2.54
AL390860.1-201ENST00000449298 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
AL390860.1-201ENST00000449298 FBLN2P98095 1184 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms