RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
CHRNA4-201ENST00000370263 SUPT5HO00267 1087 aaKnown RBP29.32■■■□□ 2.28
CHRNA4-201ENST00000370263 PELP1Q8IZL8 1130 aaKnown RBP28.91■■■□□ 2.22
CHRNA4-201ENST00000370263 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
CHRNA4-201ENST00000370263 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
CHRNA4-201ENST00000370263 PCGF6Q9BYE7 350 aa28.3■■■□□ 2.12
CHRNA4-201ENST00000370263 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
CHRNA4-201ENST00000370263 MYT1Q01538 1121 aa28.12■■■□□ 2.09
CHRNA4-201ENST00000370263 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
CHRNA4-201ENST00000370263 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
CHRNA4-201ENST00000370263 APLP2Q06481 763 aa27.78■■■□□ 2.04
CHRNA4-201ENST00000370263 ERICH6Q7L0X2 663 aa27.67■■■□□ 2.02
CHRNA4-201ENST00000370263 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
CHRNA4-201ENST00000370263 CCER1Q8TC90 406 aaPredicted RBP27.54■■■□□ 2
CHRNA4-201ENST00000370263 TTBK1Q5TCY1 1321 aaPredicted RBP27.44■■□□□ 1.98
CHRNA4-201ENST00000370263 HRCP23327 699 aa27.35■■□□□ 1.97
CHRNA4-201ENST00000370263 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
CHRNA4-201ENST00000370263 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
CHRNA4-201ENST00000370263 NEFLP07196 543 aa27.12■■□□□ 1.93
CHRNA4-201ENST00000370263 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
CHRNA4-201ENST00000370263 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
CHRNA4-201ENST00000370263 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
CHRNA4-201ENST00000370263 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
CHRNA4-201ENST00000370263 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
CHRNA4-201ENST00000370263 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
CHRNA4-201ENST00000370263 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CHRNA4-201ENST00000370263 DIEXFQ68CQ4 756 aaKnown RBP26.3■■□□□ 1.8
CHRNA4-201ENST00000370263 DAXXQ9UER7 740 aaPredicted RBP26.23■■□□□ 1.79
CHRNA4-201ENST00000370263 GTF3C3Q9Y5Q9 886 aa26.13■■□□□ 1.77
CHRNA4-201ENST00000370263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.08■■□□□ 1.77
CHRNA4-201ENST00000370263 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
CHRNA4-201ENST00000370263 RTL5Q5HYW3 569 aaPredicted RBP26.03■■□□□ 1.76
CHRNA4-201ENST00000370263 ITGAEP38570 1179 aa25.91■■□□□ 1.74
CHRNA4-201ENST00000370263 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
CHRNA4-201ENST00000370263 POLR3GLQ9BT43 218 aa25.75■■□□□ 1.71
CHRNA4-201ENST00000370263 BCANQ96GW7 911 aa25.68■■□□□ 1.7
CHRNA4-201ENST00000370263 ZNF316A6NFI3 1004 aaPredicted RBP25.67■■□□□ 1.7
CHRNA4-201ENST00000370263 CDK11AQ9UQ88 783 aaPredicted RBP25.57■■□□□ 1.68
CHRNA4-201ENST00000370263 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
CHRNA4-201ENST00000370263 CLSPNQ9HAW4 1339 aa25.45■■□□□ 1.66
CHRNA4-201ENST00000370263 ANP32CO43423 234 aa25.38■■□□□ 1.65
CHRNA4-201ENST00000370263 NEUROD1Q13562 356 aa25.26■■□□□ 1.63
CHRNA4-201ENST00000370263 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
CHRNA4-201ENST00000370263 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
CHRNA4-201ENST00000370263 ANP32AP39687 249 aaKnown RBP25.15■■□□□ 1.62
CHRNA4-201ENST00000370263 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
CHRNA4-201ENST00000370263 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
CHRNA4-201ENST00000370263 FKBP8Q14318 412 aa25.04■■□□□ 1.6
CHRNA4-201ENST00000370263 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
CHRNA4-201ENST00000370263 EIF5BO60841 1220 aaKnown RBP24.96■■□□□ 1.59
CHRNA4-201ENST00000370263 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
CHRNA4-201ENST00000370263 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
CHRNA4-201ENST00000370263 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
CHRNA4-201ENST00000370263 GLIPR1L2Q4G1C9 344 aa24.75■■□□□ 1.55
CHRNA4-201ENST00000370263 CANXP27824 592 aaKnown RBP24.69■■□□□ 1.54
CHRNA4-201ENST00000370263 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
CHRNA4-201ENST00000370263 HNRNPUQ00839 825 aaKnown RBP eCLIP24.68■■□□□ 1.54
CHRNA4-201ENST00000370263 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
CHRNA4-201ENST00000370263 NBR1Q14596 966 aa24.65■■□□□ 1.54
CHRNA4-201ENST00000370263 MIER1Q8N108 512 aa24.64■■□□□ 1.54
CHRNA4-201ENST00000370263 ANP32EQ9BTT0 268 aa24.61■■□□□ 1.53
CHRNA4-201ENST00000370263 DDX10Q13206 875 aaKnown RBP24.61■■□□□ 1.53
CHRNA4-201ENST00000370263 ANP32BQ92688 251 aaKnown RBP24.56■■□□□ 1.52
CHRNA4-201ENST00000370263 CCDC136Q96JN2 1154 aa24.5■■□□□ 1.51
CHRNA4-201ENST00000370263 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
CHRNA4-201ENST00000370263 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
CHRNA4-201ENST00000370263 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
CHRNA4-201ENST00000370263 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
CHRNA4-201ENST00000370263 HSP90AA1P07900 732 aaKnown RBP24.34■■□□□ 1.49
CHRNA4-201ENST00000370263 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
CHRNA4-201ENST00000370263 NEFMP07197 916 aa24.28■■□□□ 1.48
CHRNA4-201ENST00000370263 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
CHRNA4-201ENST00000370263 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
CHRNA4-201ENST00000370263 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
CHRNA4-201ENST00000370263 MRS2Q9HD23 443 aa24.24■■□□□ 1.47
CHRNA4-201ENST00000370263 TMC1Q8TDI8 760 aa24.21■■□□□ 1.47
CHRNA4-201ENST00000370263 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.18■■□□□ 1.46
CHRNA4-201ENST00000370263 SALL2Q9Y467 1007 aaPredicted RBP24.18■■□□□ 1.46
CHRNA4-201ENST00000370263 ARXQ96QS3 562 aa24.17■■□□□ 1.46
CHRNA4-201ENST00000370263 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHRNA4-201ENST00000370263 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
CHRNA4-201ENST00000370263 SUPT16HQ9Y5B9 1047 aaKnown RBP24.11■■□□□ 1.45
CHRNA4-201ENST00000370263 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
CHRNA4-201ENST00000370263 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
CHRNA4-201ENST00000370263 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
CHRNA4-201ENST00000370263 SLC24A1O60721 1099 aa24■■□□□ 1.43
CHRNA4-201ENST00000370263 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
CHRNA4-201ENST00000370263 ABCC9O60706 1549 aa23.99■■□□□ 1.43
CHRNA4-201ENST00000370263 BECN1Q14457 450 aa23.98■■□□□ 1.43
CHRNA4-201ENST00000370263 ERICH6BQ5W0A0 696 aa23.97■■□□□ 1.43
CHRNA4-201ENST00000370263 TRIM44Q96DX7 344 aaPredicted RBP23.96■■□□□ 1.43
CHRNA4-201ENST00000370263 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
CHRNA4-201ENST00000370263 EIF4G2P78344 907 aaKnown RBP eCLIP23.95■■□□□ 1.42
CHRNA4-201ENST00000370263 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 WDR43Q15061 677 aaKnown RBP eCLIP23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
CHRNA4-201ENST00000370263 RTN4Q9NQC3 1192 aaKnown RBP23.9■■□□□ 1.42
CHRNA4-201ENST00000370263 CLIP1P30622 1438 aa23.9■■□□□ 1.42
CHRNA4-201ENST00000370263 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
CHRNA4-201ENST00000370263 CEP162Q5TB80 1403 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms