RNA–Protein interactions for RNA: ENST00000253727.9

NR1H2-201, Transcript of nuclear receptor subfamily 1 group H member 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NR1H2, Length 1,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2-201ENST00000253727 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
NR1H2-201ENST00000253727 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.48
NR1H2-201ENST00000253727 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
NR1H2-201ENST00000253727 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
NR1H2-201ENST00000253727 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
NR1H2-201ENST00000253727 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
NR1H2-201ENST00000253727 MYO15BQ96JP2 1530 aa34.49■■■■□ 3.11
NR1H2-201ENST00000253727 ABCC9O60706 1549 aa34.44■■■■□ 3.1
NR1H2-201ENST00000253727 NACADO15069 1562 aa34.18■■■■□ 3.06
NR1H2-201ENST00000253727 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
NR1H2-201ENST00000253727 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
NR1H2-201ENST00000253727 RB1CC1Q8TDY2 1594 aa33.8■■■■□ 3
NR1H2-201ENST00000253727 UNC13AQ9UPW8 1703 aa33.16■■■□□ 2.9
NR1H2-201ENST00000253727 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
NR1H2-201ENST00000253727 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
NR1H2-201ENST00000253727 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
NR1H2-201ENST00000253727 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.83
NR1H2-201ENST00000253727 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
NR1H2-201ENST00000253727 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
NR1H2-201ENST00000253727 WIZO95785 1651 aa32.6■■■□□ 2.81
NR1H2-201ENST00000253727 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
NR1H2-201ENST00000253727 SMARCA4P51532 1647 aa32.55■■■□□ 2.8
NR1H2-201ENST00000253727 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
NR1H2-201ENST00000253727 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
NR1H2-201ENST00000253727 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
NR1H2-201ENST00000253727 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
NR1H2-201ENST00000253727 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
NR1H2-201ENST00000253727 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
NR1H2-201ENST00000253727 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
NR1H2-201ENST00000253727 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
NR1H2-201ENST00000253727 NCAPD3P42695 1498 aa31.53■■■□□ 2.64
NR1H2-201ENST00000253727 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
NR1H2-201ENST00000253727 LOC105371045A0A1W2PR82 267 aa31.44■■■□□ 2.62
NR1H2-201ENST00000253727 ABCC8Q09428 1581 aa31.42■■■□□ 2.62
NR1H2-201ENST00000253727 FAM9AQ8IZU1 332 aaPredicted RBP31.28■■■□□ 2.6
NR1H2-201ENST00000253727 CC2D2AQ9P2K1 1620 aa31.17■■■□□ 2.58
NR1H2-201ENST00000253727 WRNQ14191 1432 aaPredicted RBP eCLIP31.16■■■□□ 2.58
NR1H2-201ENST00000253727 SYNJ1O43426 1573 aa31.01■■■□□ 2.55
NR1H2-201ENST00000253727 CFTRP13569 1480 aa30.96■■■□□ 2.55
NR1H2-201ENST00000253727 EEA1Q15075 1411 aa30.95■■■□□ 2.55
NR1H2-201ENST00000253727 SOGA1O94964 1423 aa30.91■■■□□ 2.54
NR1H2-201ENST00000253727 PRDM2Q13029 1718 aa30.89■■■□□ 2.53
NR1H2-201ENST00000253727 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
NR1H2-201ENST00000253727 EHMT2Q96KQ7 1210 aa30.83■■■□□ 2.53
NR1H2-201ENST00000253727 BIVM-ERCC5R4GMW8 1640 aa30.82■■■□□ 2.52
NR1H2-201ENST00000253727 RUSC2Q8N2Y8 1516 aa30.77■■■□□ 2.52
NR1H2-201ENST00000253727 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
NR1H2-201ENST00000253727 CSRNP3Q8WYN3 585 aa30.75■■■□□ 2.51
NR1H2-201ENST00000253727 CUX1P39880 1505 aa30.66■■■□□ 2.5
NR1H2-201ENST00000253727 GOLGA3Q08378 1498 aa30.55■■■□□ 2.48
NR1H2-201ENST00000253727 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
NR1H2-201ENST00000253727 KIF21BO75037 1637 aa30.53■■■□□ 2.48
NR1H2-201ENST00000253727 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.47
NR1H2-201ENST00000253727 PCGF6Q9BYE7 350 aa30.48■■■□□ 2.47
NR1H2-201ENST00000253727 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
NR1H2-201ENST00000253727 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
NR1H2-201ENST00000253727 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
NR1H2-201ENST00000253727 CEP162Q5TB80 1403 aa30.41■■■□□ 2.46
NR1H2-201ENST00000253727 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
NR1H2-201ENST00000253727 NESP48681 1621 aa30.37■■■□□ 2.45
NR1H2-201ENST00000253727 KIF27Q86VH2 1401 aa30.34■■■□□ 2.45
NR1H2-201ENST00000253727 FGD5Q6ZNL6 1462 aa30.26■■■□□ 2.44
NR1H2-201ENST00000253727 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
NR1H2-201ENST00000253727 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
NR1H2-201ENST00000253727 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
NR1H2-201ENST00000253727 PRXQ9BXM0 1461 aa30.22■■■□□ 2.43
NR1H2-201ENST00000253727 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
NR1H2-201ENST00000253727 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
NR1H2-201ENST00000253727 PDS5BQ9NTI5 1447 aa30.16■■■□□ 2.42
NR1H2-201ENST00000253727 CUX2O14529 1486 aa30.16■■■□□ 2.42
NR1H2-201ENST00000253727 CLIP1P30622 1438 aa30.08■■■□□ 2.41
NR1H2-201ENST00000253727 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
NR1H2-201ENST00000253727 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
NR1H2-201ENST00000253727 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
NR1H2-201ENST00000253727 IGF1RP08069 1367 aa30.01■■■□□ 2.39
NR1H2-201ENST00000253727 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
NR1H2-201ENST00000253727 HRCP23327 699 aa29.96■■■□□ 2.39
NR1H2-201ENST00000253727 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
NR1H2-201ENST00000253727 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
NR1H2-201ENST00000253727 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
NR1H2-201ENST00000253727 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
NR1H2-201ENST00000253727 VPS8Q8N3P4 1428 aa29.87■■■□□ 2.37
NR1H2-201ENST00000253727 RANGAP1P46060 587 aaPredicted RBP29.8■■■□□ 2.36
NR1H2-201ENST00000253727 CUL7Q14999 1698 aa29.76■■■□□ 2.36
NR1H2-201ENST00000253727 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
NR1H2-201ENST00000253727 ABCA5Q8WWZ7 1642 aa29.72■■■□□ 2.35
NR1H2-201ENST00000253727 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
NR1H2-201ENST00000253727 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
NR1H2-201ENST00000253727 APLP2Q06481 763 aa29.64■■■□□ 2.34
NR1H2-201ENST00000253727 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
NR1H2-201ENST00000253727 TDRD9Q8NDG6 1382 aaKnown RBP29.63■■■□□ 2.33
NR1H2-201ENST00000253727 ARHGAP35Q9NRY4 1499 aa29.63■■■□□ 2.33
NR1H2-201ENST00000253727 TTBK1Q5TCY1 1321 aaPredicted RBP29.62■■■□□ 2.33
NR1H2-201ENST00000253727 WDR62O43379 1518 aa29.56■■■□□ 2.32
NR1H2-201ENST00000253727 CTTNBP2Q8WZ74 1663 aa29.52■■■□□ 2.32
NR1H2-201ENST00000253727 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
NR1H2-201ENST00000253727 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
NR1H2-201ENST00000253727 IFT140Q96RY7 1462 aa29.46■■■□□ 2.31
NR1H2-201ENST00000253727 ZEB1P37275 1124 aaPredicted RBP29.42■■■□□ 2.3
NR1H2-201ENST00000253727 EFCAB5A4FU69 1503 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms