RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
PHC1-212ENST00000543824 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
PHC1-212ENST00000543824 DCAF8L2P0C7V8 631 aa30.39■■■□□ 2.45
PHC1-212ENST00000543824 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
PHC1-212ENST00000543824 PCGF6Q9BYE7 350 aa29.7■■■□□ 2.34
PHC1-212ENST00000543824 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
PHC1-212ENST00000543824 HRCP23327 699 aa29.06■■■□□ 2.24
PHC1-212ENST00000543824 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
PHC1-212ENST00000543824 PPARGC1BQ86YN6 1023 aaKnown RBP28.74■■■□□ 2.19
PHC1-212ENST00000543824 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
PHC1-212ENST00000543824 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
PHC1-212ENST00000543824 TTBK1Q5TCY1 1321 aaPredicted RBP28.33■■■□□ 2.13
PHC1-212ENST00000543824 CENPBP07199 599 aaPredicted RBP28.33■■■□□ 2.13
PHC1-212ENST00000543824 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
PHC1-212ENST00000543824 TRIM26Q12899 539 aaPredicted RBP28.25■■■□□ 2.11
PHC1-212ENST00000543824 LOC105371045A0A1W2PR82 267 aa28.24■■■□□ 2.11
PHC1-212ENST00000543824 CCER1Q8TC90 406 aaPredicted RBP28.21■■■□□ 2.11
PHC1-212ENST00000543824 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
PHC1-212ENST00000543824 MYT1Q01538 1121 aa28.03■■■□□ 2.08
PHC1-212ENST00000543824 YTHDC1Q96MU7 727 aaKnown RBP27.97■■■□□ 2.07
PHC1-212ENST00000543824 APLP2Q06481 763 aa27.64■■■□□ 2.02
PHC1-212ENST00000543824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
PHC1-212ENST00000543824 GTF3C3Q9Y5Q9 886 aa27.41■■□□□ 1.98
PHC1-212ENST00000543824 DIEXFQ68CQ4 756 aaKnown RBP27.38■■□□□ 1.97
PHC1-212ENST00000543824 RANGAP1P46060 587 aaPredicted RBP27.38■■□□□ 1.97
PHC1-212ENST00000543824 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
PHC1-212ENST00000543824 ERICH6Q7L0X2 663 aa27.17■■□□□ 1.94
PHC1-212ENST00000543824 ACIN1Q9UKV3 1341 aaKnown RBP27.17■■□□□ 1.94
PHC1-212ENST00000543824 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
PHC1-212ENST00000543824 HNRNPUL2Q1KMD3 747 aaKnown RBP26.99■■□□□ 1.91
PHC1-212ENST00000543824 NEFLP07196 543 aa26.97■■□□□ 1.91
PHC1-212ENST00000543824 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
PHC1-212ENST00000543824 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
PHC1-212ENST00000543824 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
PHC1-212ENST00000543824 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
PHC1-212ENST00000543824 ITGAEP38570 1179 aa26.59■■□□□ 1.85
PHC1-212ENST00000543824 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
PHC1-212ENST00000543824 BCANQ96GW7 911 aa26.55■■□□□ 1.84
PHC1-212ENST00000543824 MIER1Q8N108 512 aa26.17■■□□□ 1.78
PHC1-212ENST00000543824 ZCCHC6Q5VYS8 1495 aaKnown RBP26.13■■□□□ 1.77
PHC1-212ENST00000543824 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
PHC1-212ENST00000543824 CNGB1Q14028 1251 aaPredicted RBP26.03■■□□□ 1.76
PHC1-212ENST00000543824 FKBP8Q14318 412 aa25.93■■□□□ 1.74
PHC1-212ENST00000543824 POLR3GLQ9BT43 218 aa25.88■■□□□ 1.73
PHC1-212ENST00000543824 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
PHC1-212ENST00000543824 RTL5Q5HYW3 569 aaPredicted RBP25.84■■□□□ 1.73
PHC1-212ENST00000543824 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
PHC1-212ENST00000543824 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
PHC1-212ENST00000543824 ANP32CO43423 234 aa25.8■■□□□ 1.72
PHC1-212ENST00000543824 FAM50AQ14320 339 aaKnown RBP25.77■■□□□ 1.72
PHC1-212ENST00000543824 ANP32EQ9BTT0 268 aa25.67■■□□□ 1.7
PHC1-212ENST00000543824 DAXXQ9UER7 740 aaPredicted RBP25.67■■□□□ 1.7
PHC1-212ENST00000543824 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
PHC1-212ENST00000543824 TRIM52Q96A61 297 aa25.61■■□□□ 1.69
PHC1-212ENST00000543824 SUPT16HQ9Y5B9 1047 aaKnown RBP25.53■■□□□ 1.68
PHC1-212ENST00000543824 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
PHC1-212ENST00000543824 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
PHC1-212ENST00000543824 BCL11AQ9H165 835 aa25.41■■□□□ 1.66
PHC1-212ENST00000543824 IRX6P78412 446 aaPredicted RBP25.4■■□□□ 1.66
PHC1-212ENST00000543824 HIRIP3Q9BW71 556 aaPredicted RBP25.38■■□□□ 1.65
PHC1-212ENST00000543824 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
PHC1-212ENST00000543824 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
PHC1-212ENST00000543824 NBR1Q14596 966 aa25.34■■□□□ 1.65
PHC1-212ENST00000543824 ABCC9O60706 1549 aa25.34■■□□□ 1.65
PHC1-212ENST00000543824 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.65
PHC1-212ENST00000543824 ANP32AP39687 249 aaKnown RBP25.29■■□□□ 1.64
PHC1-212ENST00000543824 NPM2Q86SE8 214 aaKnown RBP25.25■■□□□ 1.63
PHC1-212ENST00000543824 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
PHC1-212ENST00000543824 TSHZ2Q9NRE2 1034 aa25.19■■□□□ 1.62
PHC1-212ENST00000543824 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
PHC1-212ENST00000543824 ZNF326Q5BKZ1 582 aaKnown RBP25.15■■□□□ 1.62
PHC1-212ENST00000543824 CLIP1P30622 1438 aa25.15■■□□□ 1.62
PHC1-212ENST00000543824 EIF5BO60841 1220 aaKnown RBP25.12■■□□□ 1.61
PHC1-212ENST00000543824 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
PHC1-212ENST00000543824 TONSLQ96HA7 1378 aa25.08■■□□□ 1.61
PHC1-212ENST00000543824 RBM19Q9Y4C8 960 aaKnown RBP25.07■■□□□ 1.6
PHC1-212ENST00000543824 TNIKQ9UKE5 1360 aa25.06■■□□□ 1.6
PHC1-212ENST00000543824 ZBTB47Q9UFB7 747 aaPredicted RBP25■■□□□ 1.59
PHC1-212ENST00000543824 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
PHC1-212ENST00000543824 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
PHC1-212ENST00000543824 MRS2Q9HD23 443 aa24.91■■□□□ 1.58
PHC1-212ENST00000543824 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
PHC1-212ENST00000543824 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
PHC1-212ENST00000543824 SALL2Q9Y467 1007 aaPredicted RBP24.86■■□□□ 1.57
PHC1-212ENST00000543824 SOGA1O94964 1423 aa24.85■■□□□ 1.57
PHC1-212ENST00000543824 EEA1Q15075 1411 aa24.83■■□□□ 1.57
PHC1-212ENST00000543824 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
PHC1-212ENST00000543824 KCNH8Q96L42 1107 aa24.81■■□□□ 1.56
PHC1-212ENST00000543824 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
PHC1-212ENST00000543824 RTN4Q9NQC3 1192 aaKnown RBP24.78■■□□□ 1.56
PHC1-212ENST00000543824 B4GALNT3Q6L9W6 998 aa24.75■■□□□ 1.55
PHC1-212ENST00000543824 DEKP35659 375 aaKnown RBP24.75■■□□□ 1.55
PHC1-212ENST00000543824 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
PHC1-212ENST00000543824 CHIC2Q9UKJ5 165 aa24.71■■□□□ 1.55
PHC1-212ENST00000543824 PPP4R2Q9NY27 417 aa24.69■■□□□ 1.54
PHC1-212ENST00000543824 NOP58Q9Y2X3 529 aaKnown RBP24.67■■□□□ 1.54
PHC1-212ENST00000543824 TMC1Q8TDI8 760 aa24.66■■□□□ 1.54
PHC1-212ENST00000543824 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
PHC1-212ENST00000543824 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
PHC1-212ENST00000543824 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms