Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCN2BO60939 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SCN2BO60939 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SCN2BO60939 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN2BO60939 CD99P1-205ENST00000527459 561 ntBASIC17.68■□□□□ 0.42
SCN2BO60939 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SCN2BO60939 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN2BO60939 LETM1P2-201ENST00000597330 2178 ntBASIC17.68■□□□□ 0.42
SCN2BO60939 AC073195.1-201ENST00000607241 877 ntBASIC17.68■□□□□ 0.42
SCN2BO60939 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCN2BO60939 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.68■□□□□ 0.42
SCN2BO60939 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCN2BO60939 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN2BO60939 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
SCN2BO60939 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SCN2BO60939 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 AC112777.1-201ENST00000540175 1423 ntBASIC17.67■□□□□ 0.42
SCN2BO60939 AC068880.1-201ENST00000507289 2297 ntBASIC17.67■□□□□ 0.42
SCN2BO60939 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
SCN2BO60939 B3GAT3P1-201ENST00000471720 806 ntBASIC17.67■□□□□ 0.42
SCN2BO60939 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SCN2BO60939 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.67■□□□□ 0.42
SCN2BO60939 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.67■□□□□ 0.42
SCN2BO60939 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCN2BO60939 RCC2P3-201ENST00000418112 1537 ntBASIC17.67■□□□□ 0.42
SCN2BO60939 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCN2BO60939 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.66■□□□□ 0.42
SCN2BO60939 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.66■□□□□ 0.42
SCN2BO60939 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 AC005332.8-201ENST00000622750 2735 ntBASIC17.66■□□□□ 0.42
SCN2BO60939 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
SCN2BO60939 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SCN2BO60939 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCN2BO60939 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SCN2BO60939 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms