RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 NISCHQ9Y2I1 1504 aa45.51■■■■■ 4.88
PCCB-208ENST00000468777 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
PCCB-208ENST00000468777 ABCC9O60706 1549 aa39.08■■■■□ 3.85
PCCB-208ENST00000468777 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
PCCB-208ENST00000468777 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
PCCB-208ENST00000468777 NACADO15069 1562 aa37.71■■■■□ 3.63
PCCB-208ENST00000468777 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
PCCB-208ENST00000468777 DCAF1Q9Y4B6 1507 aa37.59■■■■□ 3.61
PCCB-208ENST00000468777 MYO15BQ96JP2 1530 aa37.57■■■■□ 3.6
PCCB-208ENST00000468777 UNC13AQ9UPW8 1703 aa36.93■■■■□ 3.5
PCCB-208ENST00000468777 SCRIBQ14160 1630 aa36.87■■■■□ 3.49
PCCB-208ENST00000468777 PABPN1Q86U42 306 aaKnown RBP eCLIP36.62■■■■□ 3.45
PCCB-208ENST00000468777 BICRAQ9NZM4 1560 aa36.58■■■■□ 3.45
PCCB-208ENST00000468777 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
PCCB-208ENST00000468777 EIF4G1Q04637 1599 aaKnown RBP35.57■■■■□ 3.29
PCCB-208ENST00000468777 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
PCCB-208ENST00000468777 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
PCCB-208ENST00000468777 CC2D2AQ9P2K1 1620 aa35.34■■■■□ 3.25
PCCB-208ENST00000468777 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
PCCB-208ENST00000468777 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
PCCB-208ENST00000468777 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
PCCB-208ENST00000468777 ATAD2BQ9ULI0 1458 aa34.93■■■■□ 3.18
PCCB-208ENST00000468777 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
PCCB-208ENST00000468777 RSF1Q96T23 1441 aaPredicted RBP34.86■■■■□ 3.17
PCCB-208ENST00000468777 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
PCCB-208ENST00000468777 WIZO95785 1651 aa34.81■■■■□ 3.16
PCCB-208ENST00000468777 NCAPD3P42695 1498 aa34.8■■■■□ 3.16
PCCB-208ENST00000468777 HMGXB3Q12766 1538 aa34.67■■■■□ 3.14
PCCB-208ENST00000468777 BAZ1BQ9UIG0 1483 aaKnown RBP34.67■■■■□ 3.14
PCCB-208ENST00000468777 SUPT5HO00267 1087 aaKnown RBP34.39■■■■□ 3.1
PCCB-208ENST00000468777 TOP2AP11388 1531 aaKnown RBP34.38■■■■□ 3.09
PCCB-208ENST00000468777 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
PCCB-208ENST00000468777 NESP48681 1621 aa33.97■■■■□ 3.03
PCCB-208ENST00000468777 CADPSQ9ULU8 1353 aa33.84■■■■□ 3.01
PCCB-208ENST00000468777 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
PCCB-208ENST00000468777 CFTRP13569 1480 aa33.73■■■□□ 2.99
PCCB-208ENST00000468777 ERCC6Q03468 1493 aa33.62■■■□□ 2.97
PCCB-208ENST00000468777 PDS5BQ9NTI5 1447 aa33.58■■■□□ 2.97
PCCB-208ENST00000468777 KIF21AQ7Z4S6 1674 aa33.56■■■□□ 2.96
PCCB-208ENST00000468777 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
PCCB-208ENST00000468777 FANCD2Q9BXW9 1451 aa33.48■■■□□ 2.95
PCCB-208ENST00000468777 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
PCCB-208ENST00000468777 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
PCCB-208ENST00000468777 MRC2Q9UBG0 1479 aa33.23■■■□□ 2.91
PCCB-208ENST00000468777 URB2Q14146 1524 aaKnown RBP33.14■■■□□ 2.9
PCCB-208ENST00000468777 WDR62O43379 1518 aa33.11■■■□□ 2.89
PCCB-208ENST00000468777 CUX2O14529 1486 aa33.02■■■□□ 2.88
PCCB-208ENST00000468777 TOPBP1Q92547 1522 aa33■■■□□ 2.87
PCCB-208ENST00000468777 ABCC8Q09428 1581 aa32.98■■■□□ 2.87
PCCB-208ENST00000468777 DNMBPQ6XZF7 1577 aa32.97■■■□□ 2.87
PCCB-208ENST00000468777 CUX1P39880 1505 aa32.93■■■□□ 2.86
PCCB-208ENST00000468777 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
PCCB-208ENST00000468777 SYNJ1O43426 1573 aa32.8■■■□□ 2.84
PCCB-208ENST00000468777 POLA1P09884 1462 aaPredicted RBP32.76■■■□□ 2.83
PCCB-208ENST00000468777 FGD5Q6ZNL6 1462 aa32.75■■■□□ 2.83
PCCB-208ENST00000468777 TOP2BQ02880 1626 aa32.73■■■□□ 2.83
PCCB-208ENST00000468777 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
PCCB-208ENST00000468777 RAD54L2Q9Y4B4 1467 aa32.65■■■□□ 2.82
PCCB-208ENST00000468777 IFT140Q96RY7 1462 aa32.63■■■□□ 2.81
PCCB-208ENST00000468777 SOGA1O94964 1423 aa32.61■■■□□ 2.81
PCCB-208ENST00000468777 TARBP1Q13395 1621 aaKnown RBP32.6■■■□□ 2.81
PCCB-208ENST00000468777 ZNF608Q9ULD9 1512 aaPredicted RBP32.55■■■□□ 2.8
PCCB-208ENST00000468777 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
PCCB-208ENST00000468777 TDRD9Q8NDG6 1382 aaKnown RBP32.42■■■□□ 2.78
PCCB-208ENST00000468777 EIF4G3O43432 1585 aaKnown RBP32.42■■■□□ 2.78
PCCB-208ENST00000468777 AQRO60306 1485 aaKnown RBP eCLIP32.41■■■□□ 2.782e-6■■■■□ 22.2
PCCB-208ENST00000468777 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
PCCB-208ENST00000468777 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
PCCB-208ENST00000468777 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
PCCB-208ENST00000468777 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
PCCB-208ENST00000468777 GAPVD1Q14C86 1478 aa32.24■■■□□ 2.75
PCCB-208ENST00000468777 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
PCCB-208ENST00000468777 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
PCCB-208ENST00000468777 KIF27Q86VH2 1401 aa32.11■■■□□ 2.73
PCCB-208ENST00000468777 SNAPC4Q5SXM2 1469 aa32.11■■■□□ 2.73
PCCB-208ENST00000468777 RUSC2Q8N2Y8 1516 aa32.06■■■□□ 2.72
PCCB-208ENST00000468777 MAGI1Q96QZ7 1491 aaPredicted RBP32.01■■■□□ 2.72
PCCB-208ENST00000468777 ERICH3Q5RHP9 1530 aa32.01■■■□□ 2.71
PCCB-208ENST00000468777 FBLN2P98095 1184 aa31.97■■■□□ 2.71
PCCB-208ENST00000468777 CHD1O14646 1710 aa31.95■■■□□ 2.7
PCCB-208ENST00000468777 IGF1RP08069 1367 aa31.94■■■□□ 2.7
PCCB-208ENST00000468777 ADAMTS12P58397 1594 aa31.93■■■□□ 2.7
PCCB-208ENST00000468777 SYNJ2O15056 1496 aa31.9■■■□□ 2.7
PCCB-208ENST00000468777 CHMP7Q8WUX9 453 aaPredicted RBP31.88■■■□□ 2.69
PCCB-208ENST00000468777 FHAD1B1AJZ9 1412 aa31.85■■■□□ 2.69
PCCB-208ENST00000468777 CUL7Q14999 1698 aa31.81■■■□□ 2.68
PCCB-208ENST00000468777 FAM9AQ8IZU1 332 aaPredicted RBP31.81■■■□□ 2.68
PCCB-208ENST00000468777 OSCARQ8IYS5 282 aa31.77■■■□□ 2.68
PCCB-208ENST00000468777 GRIN2AQ12879 1464 aa31.76■■■□□ 2.68
PCCB-208ENST00000468777 CARMIL1Q5VZK9 1371 aa31.76■■■□□ 2.67
PCCB-208ENST00000468777 EEA1Q15075 1411 aa31.72■■■□□ 2.67
PCCB-208ENST00000468777 CSRNP3Q8WYN3 585 aa31.69■■■□□ 2.66
PCCB-208ENST00000468777 CEP170Q5SW79 1584 aa31.62■■■□□ 2.65
PCCB-208ENST00000468777 RAPGEF2Q9Y4G8 1499 aa31.61■■■□□ 2.65
PCCB-208ENST00000468777 PRXQ9BXM0 1461 aa31.61■■■□□ 2.65
PCCB-208ENST00000468777 NUP160Q12769 1436 aa31.58■■■□□ 2.65
PCCB-208ENST00000468777 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
PCCB-208ENST00000468777 DNAJC5Q9H3Z4 198 aa31.55■■■□□ 2.64
PCCB-208ENST00000468777 EHMT2Q96KQ7 1210 aa31.45■■■□□ 2.63
PCCB-208ENST00000468777 KIF21BO75037 1637 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms