RNA–Protein interactions for RNA: ENST00000551068.7

TMEM235-204, Transcript of transmembrane protein 235, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMEM235, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-204ENST00000551068 NISCHQ9Y2I1 1504 aa47.17■■■■■ 5.14
TMEM235-204ENST00000551068 CCDC180Q9P1Z9 1646 aa42.26■■■■■ 4.36
TMEM235-204ENST00000551068 ABCC9O60706 1549 aa42■■■■■ 4.31
TMEM235-204ENST00000551068 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
TMEM235-204ENST00000551068 NACADO15069 1562 aa39.84■■■■□ 3.97
TMEM235-204ENST00000551068 DCAF8L2P0C7V8 631 aa39.8■■■■□ 3.96
TMEM235-204ENST00000551068 MYO15BQ96JP2 1530 aa39.31■■■■□ 3.88
TMEM235-204ENST00000551068 UNC13AQ9UPW8 1703 aa39.23■■■■□ 3.87
TMEM235-204ENST00000551068 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
TMEM235-204ENST00000551068 PABPN1Q86U42 306 aaKnown RBP eCLIP39.12■■■■□ 3.85
TMEM235-204ENST00000551068 DNAJC5BQ9UF47 199 aa39.01■■■■□ 3.84
TMEM235-204ENST00000551068 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
TMEM235-204ENST00000551068 BICRAQ9NZM4 1560 aa38.86■■■■□ 3.81
TMEM235-204ENST00000551068 SCRIBQ14160 1630 aa38.59■■■■□ 3.77
TMEM235-204ENST00000551068 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
TMEM235-204ENST00000551068 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
TMEM235-204ENST00000551068 EIF4G1Q04637 1599 aaKnown RBP37.92■■■■□ 3.66
TMEM235-204ENST00000551068 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
TMEM235-204ENST00000551068 SMARCA4P51532 1647 aa36.78■■■■□ 3.48
TMEM235-204ENST00000551068 NCAPD3P42695 1498 aa36.73■■■■□ 3.47
TMEM235-204ENST00000551068 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
TMEM235-204ENST00000551068 SMARCA2P51531 1590 aa36.66■■■■□ 3.46
TMEM235-204ENST00000551068 BAZ1AQ9NRL2 1556 aaPredicted RBP36.63■■■■□ 3.45
TMEM235-204ENST00000551068 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
TMEM235-204ENST00000551068 BAZ1BQ9UIG0 1483 aaKnown RBP36.42■■■■□ 3.42
TMEM235-204ENST00000551068 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
TMEM235-204ENST00000551068 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
TMEM235-204ENST00000551068 ERCC6Q03468 1493 aa36.29■■■■□ 3.4
TMEM235-204ENST00000551068 NESP48681 1621 aa36.14■■■■□ 3.38
TMEM235-204ENST00000551068 CUX2O14529 1486 aa36.04■■■■□ 3.36
TMEM235-204ENST00000551068 WIZO95785 1651 aa36■■■■□ 3.35
TMEM235-204ENST00000551068 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
TMEM235-204ENST00000551068 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
TMEM235-204ENST00000551068 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
TMEM235-204ENST00000551068 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
TMEM235-204ENST00000551068 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
TMEM235-204ENST00000551068 CADPSQ9ULU8 1353 aa35.65■■■■□ 3.3
TMEM235-204ENST00000551068 DNAJC5Q9H3Z4 198 aa35.62■■■■□ 3.29
TMEM235-204ENST00000551068 TOP2AP11388 1531 aaKnown RBP35.53■■■■□ 3.28
TMEM235-204ENST00000551068 MRC2Q9UBG0 1479 aa35.4■■■■□ 3.26
TMEM235-204ENST00000551068 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
TMEM235-204ENST00000551068 CFTRP13569 1480 aa35.3■■■■□ 3.24
TMEM235-204ENST00000551068 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
TMEM235-204ENST00000551068 WDR62O43379 1518 aa35.28■■■■□ 3.24
TMEM235-204ENST00000551068 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
TMEM235-204ENST00000551068 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
TMEM235-204ENST00000551068 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
TMEM235-204ENST00000551068 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
TMEM235-204ENST00000551068 SUPT5HO00267 1087 aaKnown RBP34.59■■■■□ 3.13
TMEM235-204ENST00000551068 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
TMEM235-204ENST00000551068 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
TMEM235-204ENST00000551068 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.13
TMEM235-204ENST00000551068 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
TMEM235-204ENST00000551068 OSCARQ8IYS5 282 aa34.42■■■■□ 3.1
TMEM235-204ENST00000551068 EIF4G3O43432 1585 aaKnown RBP34.38■■■■□ 3.09
TMEM235-204ENST00000551068 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
TMEM235-204ENST00000551068 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
TMEM235-204ENST00000551068 POLA1P09884 1462 aaPredicted RBP34.32■■■■□ 3.08
TMEM235-204ENST00000551068 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.07
TMEM235-204ENST00000551068 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
TMEM235-204ENST00000551068 CUX1P39880 1505 aa34.16■■■■□ 3.06
TMEM235-204ENST00000551068 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
TMEM235-204ENST00000551068 SOGA1O94964 1423 aa34.16■■■■□ 3.06
TMEM235-204ENST00000551068 CHD1O14646 1710 aa34.1■■■■□ 3.05
TMEM235-204ENST00000551068 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
TMEM235-204ENST00000551068 FBLN2P98095 1184 aa34.02■■■■□ 3.04
TMEM235-204ENST00000551068 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
TMEM235-204ENST00000551068 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
TMEM235-204ENST00000551068 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
TMEM235-204ENST00000551068 WDR97A6NE52 1622 aa34■■■■□ 3.03
TMEM235-204ENST00000551068 SNAPC4Q5SXM2 1469 aa33.92■■■■□ 3.02
TMEM235-204ENST00000551068 ARHGEF11O15085 1522 aa33.91■■■■□ 3.02
TMEM235-204ENST00000551068 GRIN2BQ13224 1484 aa33.84■■■■□ 3.01
TMEM235-204ENST00000551068 PBRM1Q86U86 1689 aa33.82■■■■□ 3
TMEM235-204ENST00000551068 MAGI1Q96QZ7 1491 aaPredicted RBP33.81■■■■□ 3
TMEM235-204ENST00000551068 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
TMEM235-204ENST00000551068 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■□□ 2.99
TMEM235-204ENST00000551068 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
TMEM235-204ENST00000551068 BIVM-ERCC5R4GMW8 1640 aa33.72■■■□□ 2.99
TMEM235-204ENST00000551068 ABCA5Q8WWZ7 1642 aa33.71■■■□□ 2.99
TMEM235-204ENST00000551068 TOP2BQ02880 1626 aa33.71■■■□□ 2.99
TMEM235-204ENST00000551068 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.99
TMEM235-204ENST00000551068 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
TMEM235-204ENST00000551068 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
TMEM235-204ENST00000551068 CYB5RLQ6IPT4 315 aa33.64■■■□□ 2.98
TMEM235-204ENST00000551068 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
TMEM235-204ENST00000551068 ARAP1Q96P48 1450 aa33.57■■■□□ 2.97
TMEM235-204ENST00000551068 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
TMEM235-204ENST00000551068 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
TMEM235-204ENST00000551068 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
TMEM235-204ENST00000551068 FHAD1B1AJZ9 1412 aa33.33■■■□□ 2.93
TMEM235-204ENST00000551068 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
TMEM235-204ENST00000551068 NUP160Q12769 1436 aa33.24■■■□□ 2.91
TMEM235-204ENST00000551068 TRHP20396 242 aaPredicted RBP33.23■■■□□ 2.91
TMEM235-204ENST00000551068 ERCC6L2Q5T890 1561 aa33.15■■■□□ 2.9
TMEM235-204ENST00000551068 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
TMEM235-204ENST00000551068 KIF27Q86VH2 1401 aa33.05■■■□□ 2.88
TMEM235-204ENST00000551068 RUSC2Q8N2Y8 1516 aa32.98■■■□□ 2.87
TMEM235-204ENST00000551068 CUL7Q14999 1698 aa32.98■■■□□ 2.87
TMEM235-204ENST00000551068 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms