Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN22Q8N7P3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 KRT8P32-201ENST00000512863 1461 ntBASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN22Q8N7P3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 KRT16P5-201ENST00000455284 522 ntBASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 PRSS44-201ENST00000515154 1146 ntBASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN22Q8N7P3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 KRT8P3-201ENST00000519669 1449 ntBASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CLDN22Q8N7P3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 AC067852.2-201ENST00000590513 2313 ntBASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 C1QBPP2-201ENST00000528754 825 ntBASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 AC110285.5-201ENST00000611501 352 ntBASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN22Q8N7P3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17■□□□□ 0.31
CLDN22Q8N7P3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms