RNA–Protein interactions for RNA: ENST00000432651.5

PTPA-216, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-216ENST00000432651 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
PTPA-216ENST00000432651 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
PTPA-216ENST00000432651 ABCC9O60706 1549 aa39.7■■■■□ 3.95
PTPA-216ENST00000432651 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
PTPA-216ENST00000432651 NACADO15069 1562 aa38.49■■■■□ 3.75
PTPA-216ENST00000432651 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
PTPA-216ENST00000432651 RB1CC1Q8TDY2 1594 aa38.43■■■■□ 3.74
PTPA-216ENST00000432651 DCAF1Q9Y4B6 1507 aa38.4■■■■□ 3.74
PTPA-216ENST00000432651 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
PTPA-216ENST00000432651 UNC13AQ9UPW8 1703 aa37.52■■■■□ 3.6
PTPA-216ENST00000432651 SCRIBQ14160 1630 aa37.39■■■■□ 3.58
PTPA-216ENST00000432651 BICRAQ9NZM4 1560 aa37.23■■■■□ 3.55
PTPA-216ENST00000432651 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
PTPA-216ENST00000432651 SHROOM4Q9ULL8 1493 aa36.99■■■■□ 3.51
PTPA-216ENST00000432651 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
PTPA-216ENST00000432651 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
PTPA-216ENST00000432651 CECR2Q9BXF3 1484 aa35.98■■■■□ 3.35
PTPA-216ENST00000432651 CC2D2AQ9P2K1 1620 aa35.97■■■■□ 3.35
PTPA-216ENST00000432651 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
PTPA-216ENST00000432651 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
PTPA-216ENST00000432651 MROH2BQ7Z745 1585 aa35.66■■■■□ 3.3
PTPA-216ENST00000432651 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
PTPA-216ENST00000432651 ATAD2BQ9ULI0 1458 aa35.55■■■■□ 3.28
PTPA-216ENST00000432651 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
PTPA-216ENST00000432651 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
PTPA-216ENST00000432651 HMGXB3Q12766 1538 aa35.39■■■■□ 3.26
PTPA-216ENST00000432651 RSF1Q96T23 1441 aaPredicted RBP35.39■■■■□ 3.26
PTPA-216ENST00000432651 WIZO95785 1651 aa35.28■■■■□ 3.24
PTPA-216ENST00000432651 BAZ1BQ9UIG0 1483 aaKnown RBP35.28■■■■□ 3.24
PTPA-216ENST00000432651 TOP2AP11388 1531 aaKnown RBP34.99■■■■□ 3.19
PTPA-216ENST00000432651 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
PTPA-216ENST00000432651 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
PTPA-216ENST00000432651 LAMC3Q9Y6N6 1575 aa34.52■■■■□ 3.12
PTPA-216ENST00000432651 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
PTPA-216ENST00000432651 NESP48681 1621 aa34.45■■■■□ 3.11
PTPA-216ENST00000432651 CFTRP13569 1480 aa34.36■■■■□ 3.09
PTPA-216ENST00000432651 PDS5BQ9NTI5 1447 aa34.25■■■■□ 3.07
PTPA-216ENST00000432651 ERCC6Q03468 1493 aa34.2■■■■□ 3.07
PTPA-216ENST00000432651 PRDM2Q13029 1718 aa34.15■■■■□ 3.06
PTPA-216ENST00000432651 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
PTPA-216ENST00000432651 FANCD2Q9BXW9 1451 aa34.06■■■■□ 3.04
PTPA-216ENST00000432651 CEP164Q9UPV0 1460 aa34■■■■□ 3.03
PTPA-216ENST00000432651 THOC2Q8NI27 1593 aaKnown RBP33.93■■■■□ 3.02
PTPA-216ENST00000432651 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
PTPA-216ENST00000432651 CUX2O14529 1486 aa33.78■■■■□ 3
PTPA-216ENST00000432651 WDR62O43379 1518 aa33.78■■■■□ 3
PTPA-216ENST00000432651 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
PTPA-216ENST00000432651 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
PTPA-216ENST00000432651 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
PTPA-216ENST00000432651 TOPBP1Q92547 1522 aa33.57■■■□□ 2.96
PTPA-216ENST00000432651 CUX1P39880 1505 aa33.43■■■□□ 2.94
PTPA-216ENST00000432651 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.931e-6■■□□□ 12
PTPA-216ENST00000432651 POLA1P09884 1462 aaPredicted RBP33.31■■■□□ 2.92
PTPA-216ENST00000432651 IFT140Q96RY7 1462 aa33.29■■■□□ 2.92
PTPA-216ENST00000432651 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
PTPA-216ENST00000432651 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
PTPA-216ENST00000432651 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
PTPA-216ENST00000432651 SYNJ1O43426 1573 aa33.26■■■□□ 2.91
PTPA-216ENST00000432651 TARBP1Q13395 1621 aaKnown RBP33.18■■■□□ 2.9
PTPA-216ENST00000432651 SOGA1O94964 1423 aa33.16■■■□□ 2.9
PTPA-216ENST00000432651 RAD54L2Q9Y4B4 1467 aa33.11■■■□□ 2.89
PTPA-216ENST00000432651 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
PTPA-216ENST00000432651 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
PTPA-216ENST00000432651 ABCA10Q8WWZ4 1543 aa33.01■■■□□ 2.87
PTPA-216ENST00000432651 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
PTPA-216ENST00000432651 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.863e-7■■■■■ 30.5
PTPA-216ENST00000432651 TDRD9Q8NDG6 1382 aaKnown RBP32.88■■■□□ 2.85
PTPA-216ENST00000432651 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
PTPA-216ENST00000432651 GAPVD1Q14C86 1478 aa32.79■■■□□ 2.84
PTPA-216ENST00000432651 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
PTPA-216ENST00000432651 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
PTPA-216ENST00000432651 PBRM1Q86U86 1689 aa32.71■■■□□ 2.83
PTPA-216ENST00000432651 MAGI1Q96QZ7 1491 aaPredicted RBP32.66■■■□□ 2.82
PTPA-216ENST00000432651 KIF27Q86VH2 1401 aa32.65■■■□□ 2.82
PTPA-216ENST00000432651 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
PTPA-216ENST00000432651 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
PTPA-216ENST00000432651 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
PTPA-216ENST00000432651 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
PTPA-216ENST00000432651 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
PTPA-216ENST00000432651 CHD1O14646 1710 aa32.46■■■□□ 2.79
PTPA-216ENST00000432651 IGF1RP08069 1367 aa32.45■■■□□ 2.78
PTPA-216ENST00000432651 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
PTPA-216ENST00000432651 CUL7Q14999 1698 aa32.4■■■□□ 2.78
PTPA-216ENST00000432651 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
PTPA-216ENST00000432651 RUSC2Q8N2Y8 1516 aa32.4■■■□□ 2.78
PTPA-216ENST00000432651 OSCARQ8IYS5 282 aa32.38■■■□□ 2.77
PTPA-216ENST00000432651 FBLN2P98095 1184 aa32.37■■■□□ 2.77
PTPA-216ENST00000432651 GRIN2AQ12879 1464 aa32.33■■■□□ 2.77
PTPA-216ENST00000432651 EEA1Q15075 1411 aa32.32■■■□□ 2.76
PTPA-216ENST00000432651 CARMIL1Q5VZK9 1371 aa32.27■■■□□ 2.76
PTPA-216ENST00000432651 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
PTPA-216ENST00000432651 NUP160Q12769 1436 aa32.19■■■□□ 2.74
PTPA-216ENST00000432651 CLASP1Q7Z460 1538 aa32.16■■■□□ 2.74
PTPA-216ENST00000432651 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
PTPA-216ENST00000432651 CSRNP3Q8WYN3 585 aa32.14■■■□□ 2.74
PTPA-216ENST00000432651 RAPGEF2Q9Y4G8 1499 aa32.14■■■□□ 2.74
PTPA-216ENST00000432651 PRXQ9BXM0 1461 aa32.13■■■□□ 2.73
PTPA-216ENST00000432651 FAM9AQ8IZU1 332 aaPredicted RBP32.01■■■□□ 2.71
PTPA-216ENST00000432651 KIAA0586Q9BVV6 1533 aa31.96■■■□□ 2.71
PTPA-216ENST00000432651 KIF21BO75037 1637 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms