RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
CROCCP4-202ENST00000633627 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
CROCCP4-202ENST00000633627 ABCC9O60706 1549 aa40.19■■■■■ 4.02
CROCCP4-202ENST00000633627 ZCCHC6Q5VYS8 1495 aaKnown RBP38.98■■■■□ 3.83
CROCCP4-202ENST00000633627 DCAF8L2P0C7V8 631 aa38.84■■■■□ 3.81
CROCCP4-202ENST00000633627 NACADO15069 1562 aa38.83■■■■□ 3.81
CROCCP4-202ENST00000633627 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
CROCCP4-202ENST00000633627 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
CROCCP4-202ENST00000633627 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
CROCCP4-202ENST00000633627 UNC13AQ9UPW8 1703 aa37.93■■■■□ 3.66
CROCCP4-202ENST00000633627 SCRIBQ14160 1630 aa37.74■■■■□ 3.63
CROCCP4-202ENST00000633627 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
CROCCP4-202ENST00000633627 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
CROCCP4-202ENST00000633627 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.55
CROCCP4-202ENST00000633627 DNAJC5BQ9UF47 199 aa36.69■■■■□ 3.46
CROCCP4-202ENST00000633627 EIF4G1Q04637 1599 aaKnown RBP36.6■■■■□ 3.45
CROCCP4-202ENST00000633627 CC2D2AQ9P2K1 1620 aa36.37■■■■□ 3.41
CROCCP4-202ENST00000633627 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
CROCCP4-202ENST00000633627 SMARCA4P51532 1647 aa36.16■■■■□ 3.38
CROCCP4-202ENST00000633627 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
CROCCP4-202ENST00000633627 MROH2BQ7Z745 1585 aa36.01■■■■□ 3.35
CROCCP4-202ENST00000633627 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
CROCCP4-202ENST00000633627 NCAPD3P42695 1498 aa35.86■■■■□ 3.33
CROCCP4-202ENST00000633627 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
CROCCP4-202ENST00000633627 PEG3Q9GZU2 1588 aa35.84■■■■□ 3.33
CROCCP4-202ENST00000633627 RSF1Q96T23 1441 aaPredicted RBP35.72■■■■□ 3.31
CROCCP4-202ENST00000633627 HMGXB3Q12766 1538 aa35.68■■■■□ 3.3
CROCCP4-202ENST00000633627 WIZO95785 1651 aa35.61■■■■□ 3.29
CROCCP4-202ENST00000633627 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
CROCCP4-202ENST00000633627 TOP2AP11388 1531 aaKnown RBP35.26■■■■□ 3.23
CROCCP4-202ENST00000633627 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
CROCCP4-202ENST00000633627 NESP48681 1621 aa34.88■■■■□ 3.17
CROCCP4-202ENST00000633627 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
CROCCP4-202ENST00000633627 LAMC3Q9Y6N6 1575 aa34.83■■■■□ 3.17
CROCCP4-202ENST00000633627 CADPSQ9ULU8 1353 aa34.82■■■■□ 3.16
CROCCP4-202ENST00000633627 CFTRP13569 1480 aa34.68■■■■□ 3.14
CROCCP4-202ENST00000633627 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
CROCCP4-202ENST00000633627 ERCC6Q03468 1493 aa34.58■■■■□ 3.13
CROCCP4-202ENST00000633627 KIF21AQ7Z4S6 1674 aa34.45■■■■□ 3.11
CROCCP4-202ENST00000633627 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
CROCCP4-202ENST00000633627 PRDM2Q13029 1718 aa34.39■■■■□ 3.1
CROCCP4-202ENST00000633627 CEP164Q9UPV0 1460 aa34.31■■■■□ 3.08
CROCCP4-202ENST00000633627 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
CROCCP4-202ENST00000633627 MRC2Q9UBG0 1479 aa34.2■■■■□ 3.07
CROCCP4-202ENST00000633627 CUX2O14529 1486 aa34.14■■■■□ 3.06
CROCCP4-202ENST00000633627 WDR62O43379 1518 aa34.09■■■■□ 3.05
CROCCP4-202ENST00000633627 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
CROCCP4-202ENST00000633627 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
CROCCP4-202ENST00000633627 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
CROCCP4-202ENST00000633627 DNMBPQ6XZF7 1577 aa33.86■■■■□ 3.01
CROCCP4-202ENST00000633627 CUX1P39880 1505 aa33.75■■■□□ 2.99
CROCCP4-202ENST00000633627 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
CROCCP4-202ENST00000633627 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
CROCCP4-202ENST00000633627 IFT140Q96RY7 1462 aa33.59■■■□□ 2.97
CROCCP4-202ENST00000633627 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.97
CROCCP4-202ENST00000633627 SYNJ1O43426 1573 aa33.54■■■□□ 2.96
CROCCP4-202ENST00000633627 TOP2BQ02880 1626 aa33.53■■■□□ 2.96
CROCCP4-202ENST00000633627 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
CROCCP4-202ENST00000633627 TARBP1Q13395 1621 aaKnown RBP33.51■■■□□ 2.96
CROCCP4-202ENST00000633627 SOGA1O94964 1423 aa33.49■■■□□ 2.95
CROCCP4-202ENST00000633627 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
CROCCP4-202ENST00000633627 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
CROCCP4-202ENST00000633627 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
CROCCP4-202ENST00000633627 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
CROCCP4-202ENST00000633627 AQRO60306 1485 aaKnown RBP eCLIP33.28■■■□□ 2.92
CROCCP4-202ENST00000633627 EIF4G3O43432 1585 aaKnown RBP33.28■■■□□ 2.92
CROCCP4-202ENST00000633627 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
CROCCP4-202ENST00000633627 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
CROCCP4-202ENST00000633627 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
CROCCP4-202ENST00000633627 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
CROCCP4-202ENST00000633627 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
CROCCP4-202ENST00000633627 PBRM1Q86U86 1689 aa32.98■■■□□ 2.87
CROCCP4-202ENST00000633627 SNAPC4Q5SXM2 1469 aa32.96■■■□□ 2.87
CROCCP4-202ENST00000633627 MAGI1Q96QZ7 1491 aaPredicted RBP32.93■■■□□ 2.86
CROCCP4-202ENST00000633627 KIF27Q86VH2 1401 aa32.91■■■□□ 2.86
CROCCP4-202ENST00000633627 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
CROCCP4-202ENST00000633627 CHIC1Q5VXU3 224 aa32.88■■■□□ 2.85
CROCCP4-202ENST00000633627 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
CROCCP4-202ENST00000633627 CHD1O14646 1710 aa32.8■■■□□ 2.84
CROCCP4-202ENST00000633627 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
CROCCP4-202ENST00000633627 DNAJC5Q9H3Z4 198 aa32.79■■■□□ 2.84
CROCCP4-202ENST00000633627 IGF1RP08069 1367 aa32.79■■■□□ 2.84
CROCCP4-202ENST00000633627 FBLN2P98095 1184 aa32.77■■■□□ 2.84
CROCCP4-202ENST00000633627 ADAMTS12P58397 1594 aa32.76■■■□□ 2.84
CROCCP4-202ENST00000633627 CHMP7Q8WUX9 453 aaPredicted RBP32.75■■■□□ 2.83
CROCCP4-202ENST00000633627 FHAD1B1AJZ9 1412 aa32.74■■■□□ 2.83
CROCCP4-202ENST00000633627 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
CROCCP4-202ENST00000633627 GRIN2AQ12879 1464 aa32.63■■■□□ 2.81
CROCCP4-202ENST00000633627 CUL7Q14999 1698 aa32.61■■■□□ 2.81
CROCCP4-202ENST00000633627 CARMIL1Q5VZK9 1371 aa32.57■■■□□ 2.8
CROCCP4-202ENST00000633627 NUP160Q12769 1436 aa32.51■■■□□ 2.79
CROCCP4-202ENST00000633627 CLASP1Q7Z460 1538 aa32.49■■■□□ 2.79
CROCCP4-202ENST00000633627 EEA1Q15075 1411 aa32.47■■■□□ 2.79
CROCCP4-202ENST00000633627 CEP170Q5SW79 1584 aa32.46■■■□□ 2.79
CROCCP4-202ENST00000633627 CSRNP3Q8WYN3 585 aa32.41■■■□□ 2.78
CROCCP4-202ENST00000633627 PRXQ9BXM0 1461 aa32.39■■■□□ 2.78
CROCCP4-202ENST00000633627 RAPGEF2Q9Y4G8 1499 aa32.39■■■□□ 2.78
CROCCP4-202ENST00000633627 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
CROCCP4-202ENST00000633627 ARHGEF11O15085 1522 aa32.26■■■□□ 2.75
CROCCP4-202ENST00000633627 KIAA0586Q9BVV6 1533 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms