RNA–Protein interactions for RNA: ENST00000489363.5

FAM53A-207, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 2 BASIC

Gene FAM53A, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-207ENST00000489363 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.19
FAM53A-207ENST00000489363 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
FAM53A-207ENST00000489363 HRCP23327 699 aa30.1■■■□□ 2.41
FAM53A-207ENST00000489363 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
FAM53A-207ENST00000489363 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
FAM53A-207ENST00000489363 PCGF6Q9BYE7 350 aa29.64■■■□□ 2.34
FAM53A-207ENST00000489363 PPARGC1BQ86YN6 1023 aaKnown RBP29.61■■■□□ 2.33
FAM53A-207ENST00000489363 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
FAM53A-207ENST00000489363 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
FAM53A-207ENST00000489363 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
FAM53A-207ENST00000489363 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
FAM53A-207ENST00000489363 ABCC9O60706 1549 aa28.92■■■□□ 2.22
FAM53A-207ENST00000489363 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
FAM53A-207ENST00000489363 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
FAM53A-207ENST00000489363 PELP1Q8IZL8 1130 aaKnown RBP28.75■■■□□ 2.19
FAM53A-207ENST00000489363 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
FAM53A-207ENST00000489363 SCAF1Q9H7N4 1312 aaKnown RBP28.47■■■□□ 2.15
FAM53A-207ENST00000489363 ZEB1P37275 1124 aaPredicted RBP28.29■■■□□ 2.12
FAM53A-207ENST00000489363 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
FAM53A-207ENST00000489363 NACADO15069 1562 aa27.93■■■□□ 2.06
FAM53A-207ENST00000489363 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
FAM53A-207ENST00000489363 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
FAM53A-207ENST00000489363 FAM9AQ8IZU1 332 aaPredicted RBP27.77■■■□□ 2.04
FAM53A-207ENST00000489363 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
FAM53A-207ENST00000489363 EHMT2Q96KQ7 1210 aa27.72■■■□□ 2.03
FAM53A-207ENST00000489363 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
FAM53A-207ENST00000489363 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
FAM53A-207ENST00000489363 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
FAM53A-207ENST00000489363 MYT1Q01538 1121 aa27.54■■■□□ 2
FAM53A-207ENST00000489363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
FAM53A-207ENST00000489363 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
FAM53A-207ENST00000489363 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.99
FAM53A-207ENST00000489363 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
FAM53A-207ENST00000489363 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
FAM53A-207ENST00000489363 DIEXFQ68CQ4 756 aaKnown RBP27.38■■□□□ 1.97
FAM53A-207ENST00000489363 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
FAM53A-207ENST00000489363 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
FAM53A-207ENST00000489363 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
FAM53A-207ENST00000489363 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
FAM53A-207ENST00000489363 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
FAM53A-207ENST00000489363 WIZO95785 1651 aa27.02■■□□□ 1.92
FAM53A-207ENST00000489363 ZNF316A6NFI3 1004 aaPredicted RBP26.86■■□□□ 1.89
FAM53A-207ENST00000489363 BAZ1AQ9NRL2 1556 aaPredicted RBP26.83■■□□□ 1.89
FAM53A-207ENST00000489363 MIER1Q8N108 512 aa26.72■■□□□ 1.87
FAM53A-207ENST00000489363 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
FAM53A-207ENST00000489363 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
FAM53A-207ENST00000489363 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
FAM53A-207ENST00000489363 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
FAM53A-207ENST00000489363 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
FAM53A-207ENST00000489363 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
FAM53A-207ENST00000489363 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
FAM53A-207ENST00000489363 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
FAM53A-207ENST00000489363 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
FAM53A-207ENST00000489363 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
FAM53A-207ENST00000489363 TNIKQ9UKE5 1360 aa26.3■■□□□ 1.8
FAM53A-207ENST00000489363 SOGA1O94964 1423 aa26.27■■□□□ 1.8
FAM53A-207ENST00000489363 SUPT16HQ9Y5B9 1047 aaKnown RBP26.25■■□□□ 1.79
FAM53A-207ENST00000489363 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
FAM53A-207ENST00000489363 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
FAM53A-207ENST00000489363 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
FAM53A-207ENST00000489363 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
FAM53A-207ENST00000489363 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
FAM53A-207ENST00000489363 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
FAM53A-207ENST00000489363 ANP32EQ9BTT0 268 aa26.08■■□□□ 1.77
FAM53A-207ENST00000489363 CLSPNQ9HAW4 1339 aa26.05■■□□□ 1.76
FAM53A-207ENST00000489363 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
FAM53A-207ENST00000489363 EEA1Q15075 1411 aa25.97■■□□□ 1.75
FAM53A-207ENST00000489363 BCL11AQ9H165 835 aa25.97■■□□□ 1.75
FAM53A-207ENST00000489363 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
FAM53A-207ENST00000489363 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
FAM53A-207ENST00000489363 APLP2Q06481 763 aa25.85■■□□□ 1.73
FAM53A-207ENST00000489363 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
FAM53A-207ENST00000489363 CLIP1P30622 1438 aa25.83■■□□□ 1.72
FAM53A-207ENST00000489363 RANGAP1P46060 587 aaPredicted RBP25.81■■□□□ 1.72
FAM53A-207ENST00000489363 BCANQ96GW7 911 aa25.81■■□□□ 1.72
FAM53A-207ENST00000489363 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
FAM53A-207ENST00000489363 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
FAM53A-207ENST00000489363 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
FAM53A-207ENST00000489363 DHX57Q6P158 1386 aaKnown RBP25.76■■□□□ 1.71
FAM53A-207ENST00000489363 KCNH8Q96L42 1107 aa25.74■■□□□ 1.71
FAM53A-207ENST00000489363 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
FAM53A-207ENST00000489363 FKBP8Q14318 412 aa25.62■■□□□ 1.69
FAM53A-207ENST00000489363 KIF21BO75037 1637 aa25.62■■□□□ 1.69
FAM53A-207ENST00000489363 RAPGEF2Q9Y4G8 1499 aa25.54■■□□□ 1.68
FAM53A-207ENST00000489363 RBM19Q9Y4C8 960 aaKnown RBP25.51■■□□□ 1.67
FAM53A-207ENST00000489363 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
FAM53A-207ENST00000489363 KANK4Q5T7N3 995 aaPredicted RBP25.45■■□□□ 1.66
FAM53A-207ENST00000489363 NESP48681 1621 aa25.44■■□□□ 1.66
FAM53A-207ENST00000489363 ITGAEP38570 1179 aa25.42■■□□□ 1.66
FAM53A-207ENST00000489363 CFTRP13569 1480 aa25.38■■□□□ 1.65
FAM53A-207ENST00000489363 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
FAM53A-207ENST00000489363 NEFLP07196 543 aa25.37■■□□□ 1.65
FAM53A-207ENST00000489363 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
FAM53A-207ENST00000489363 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
FAM53A-207ENST00000489363 CUX1P39880 1505 aa25.3■■□□□ 1.64
FAM53A-207ENST00000489363 TRIM52Q96A61 297 aa25.3■■□□□ 1.64
FAM53A-207ENST00000489363 MSH5O43196 834 aa25.29■■□□□ 1.64
FAM53A-207ENST00000489363 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
FAM53A-207ENST00000489363 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
FAM53A-207ENST00000489363 ARAP1Q96P48 1450 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms