RNA–Protein interactions for RNA: ENST00000369801.1

CSF1-203, Transcript of colony stimulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene CSF1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-203ENST00000369801 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
CSF1-203ENST00000369801 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
CSF1-203ENST00000369801 ABCC9O60706 1549 aa40.62■■■■■ 4.09
CSF1-203ENST00000369801 ZCCHC6Q5VYS8 1495 aaKnown RBP39.18■■■■□ 3.86
CSF1-203ENST00000369801 RB1CC1Q8TDY2 1594 aa39.12■■■■□ 3.85
CSF1-203ENST00000369801 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
CSF1-203ENST00000369801 NACADO15069 1562 aa39.09■■■■□ 3.85
CSF1-203ENST00000369801 MYO15BQ96JP2 1530 aa38.87■■■■□ 3.81
CSF1-203ENST00000369801 DCAF1Q9Y4B6 1507 aa38.81■■■■□ 3.8
CSF1-203ENST00000369801 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
CSF1-203ENST00000369801 SCRIBQ14160 1630 aa38.14■■■■□ 3.7
CSF1-203ENST00000369801 BICRAQ9NZM4 1560 aa38■■■■□ 3.67
CSF1-203ENST00000369801 PABPN1Q86U42 306 aaKnown RBP eCLIP37.93■■■■□ 3.66
CSF1-203ENST00000369801 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
CSF1-203ENST00000369801 DNAJC5BQ9UF47 199 aa37.05■■■■□ 3.52
CSF1-203ENST00000369801 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
CSF1-203ENST00000369801 CC2D2AQ9P2K1 1620 aa36.78■■■■□ 3.48
CSF1-203ENST00000369801 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
CSF1-203ENST00000369801 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
CSF1-203ENST00000369801 BAZ1AQ9NRL2 1556 aaPredicted RBP36.38■■■■□ 3.41
CSF1-203ENST00000369801 MROH2BQ7Z745 1585 aa36.23■■■■□ 3.39
CSF1-203ENST00000369801 ATAD2BQ9ULI0 1458 aa36.13■■■■□ 3.37
CSF1-203ENST00000369801 SMARCA2P51531 1590 aa36.09■■■■□ 3.37
CSF1-203ENST00000369801 PEG3Q9GZU2 1588 aa36.04■■■■□ 3.36
CSF1-203ENST00000369801 NCAPD3P42695 1498 aa36.03■■■■□ 3.36
CSF1-203ENST00000369801 HMGXB3Q12766 1538 aa35.94■■■■□ 3.34
CSF1-203ENST00000369801 WIZO95785 1651 aa35.93■■■■□ 3.34
CSF1-203ENST00000369801 BAZ1BQ9UIG0 1483 aaKnown RBP35.85■■■■□ 3.33
CSF1-203ENST00000369801 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
CSF1-203ENST00000369801 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
CSF1-203ENST00000369801 NESP48681 1621 aa35.24■■■■□ 3.23
CSF1-203ENST00000369801 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
CSF1-203ENST00000369801 SUPT5HO00267 1087 aaKnown RBP35.09■■■■□ 3.21
CSF1-203ENST00000369801 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
CSF1-203ENST00000369801 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
CSF1-203ENST00000369801 ERCC6Q03468 1493 aa34.94■■■■□ 3.18
CSF1-203ENST00000369801 KIF21AQ7Z4S6 1674 aa34.92■■■■□ 3.18
CSF1-203ENST00000369801 CFTRP13569 1480 aa34.85■■■■□ 3.17
CSF1-203ENST00000369801 PRDM2Q13029 1718 aa34.82■■■■□ 3.17
CSF1-203ENST00000369801 PDS5BQ9NTI5 1447 aa34.79■■■■□ 3.16
CSF1-203ENST00000369801 THOC2Q8NI27 1593 aaKnown RBP34.69■■■■□ 3.14
CSF1-203ENST00000369801 FANCD2Q9BXW9 1451 aa34.64■■■■□ 3.14
CSF1-203ENST00000369801 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
CSF1-203ENST00000369801 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
CSF1-203ENST00000369801 CUX2O14529 1486 aa34.47■■■■□ 3.11
CSF1-203ENST00000369801 WDR62O43379 1518 aa34.4■■■■□ 3.1
CSF1-203ENST00000369801 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
CSF1-203ENST00000369801 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
CSF1-203ENST00000369801 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
CSF1-203ENST00000369801 ABCC8Q09428 1581 aa34.05■■■■□ 3.04
CSF1-203ENST00000369801 CUX1P39880 1505 aa33.99■■■■□ 3.03
CSF1-203ENST00000369801 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
CSF1-203ENST00000369801 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
CSF1-203ENST00000369801 IFT140Q96RY7 1462 aa33.82■■■■□ 3
CSF1-203ENST00000369801 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
CSF1-203ENST00000369801 SYNJ1O43426 1573 aa33.79■■■■□ 3
CSF1-203ENST00000369801 BIVM-ERCC5R4GMW8 1640 aa33.78■■■■□ 3
CSF1-203ENST00000369801 WRNQ14191 1432 aaPredicted RBP eCLIP33.78■■■■□ 3
CSF1-203ENST00000369801 TOP2BQ02880 1626 aa33.74■■■□□ 2.99
CSF1-203ENST00000369801 ZNF608Q9ULD9 1512 aaPredicted RBP33.73■■■□□ 2.99
CSF1-203ENST00000369801 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
CSF1-203ENST00000369801 SOGA1O94964 1423 aa33.67■■■□□ 2.98
CSF1-203ENST00000369801 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
CSF1-203ENST00000369801 WDR97A6NE52 1622 aa33.63■■■□□ 2.97
CSF1-203ENST00000369801 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.964e-6■■■■■ 28.3
CSF1-203ENST00000369801 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
CSF1-203ENST00000369801 ABCA10Q8WWZ4 1543 aa33.46■■■□□ 2.95
CSF1-203ENST00000369801 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
CSF1-203ENST00000369801 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
CSF1-203ENST00000369801 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
CSF1-203ENST00000369801 CHD1O14646 1710 aa33.27■■■□□ 2.92
CSF1-203ENST00000369801 GRIN2BQ13224 1484 aa33.26■■■□□ 2.92
CSF1-203ENST00000369801 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
CSF1-203ENST00000369801 MAGI1Q96QZ7 1491 aaPredicted RBP33.16■■■□□ 2.9
CSF1-203ENST00000369801 DNAJC5Q9H3Z4 198 aa33.12■■■□□ 2.89
CSF1-203ENST00000369801 ERICH3Q5RHP9 1530 aa33.07■■■□□ 2.88
CSF1-203ENST00000369801 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
CSF1-203ENST00000369801 ADAMTS12P58397 1594 aa33.07■■■□□ 2.88
CSF1-203ENST00000369801 FBLN2P98095 1184 aa33.05■■■□□ 2.88
CSF1-203ENST00000369801 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
CSF1-203ENST00000369801 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
CSF1-203ENST00000369801 OSCARQ8IYS5 282 aa33.02■■■□□ 2.88
CSF1-203ENST00000369801 CHMP7Q8WUX9 453 aaPredicted RBP32.95■■■□□ 2.86
CSF1-203ENST00000369801 FHAD1B1AJZ9 1412 aa32.9■■■□□ 2.86
CSF1-203ENST00000369801 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
CSF1-203ENST00000369801 GRIN2AQ12879 1464 aa32.87■■■□□ 2.85
CSF1-203ENST00000369801 CUL7Q14999 1698 aa32.87■■■□□ 2.85
CSF1-203ENST00000369801 IGF1RP08069 1367 aa32.85■■■□□ 2.85
CSF1-203ENST00000369801 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
CSF1-203ENST00000369801 CLASP1Q7Z460 1538 aa32.79■■■□□ 2.84
CSF1-203ENST00000369801 CEP170Q5SW79 1584 aa32.77■■■□□ 2.84
CSF1-203ENST00000369801 NUP160Q12769 1436 aa32.69■■■□□ 2.82
CSF1-203ENST00000369801 CARMIL1Q5VZK9 1371 aa32.67■■■□□ 2.82
CSF1-203ENST00000369801 RIMBP3CA6NJZ7 1639 aa32.65■■■□□ 2.82
CSF1-203ENST00000369801 RIMBP3BA6NNM3 1639 aa32.65■■■□□ 2.82
CSF1-203ENST00000369801 RIMBP3Q9UFD9 1639 aa32.65■■■□□ 2.82
CSF1-203ENST00000369801 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
CSF1-203ENST00000369801 RAPGEF2Q9Y4G8 1499 aa32.53■■■□□ 2.8
CSF1-203ENST00000369801 SHROOM2Q13796 1616 aa32.5■■■□□ 2.79
CSF1-203ENST00000369801 EEA1Q15075 1411 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms