RNA–Protein interactions for RNA: ENST00000300013.8

SAAL1-201, Transcript of serum amyloid A like 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SAAL1, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAAL1-201ENST00000300013 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
SAAL1-201ENST00000300013 CCDC180Q9P1Z9 1646 aa37.27■■■■□ 3.56
SAAL1-201ENST00000300013 ZCCHC6Q5VYS8 1495 aaKnown RBP35.7■■■■□ 3.31
SAAL1-201ENST00000300013 DCAF1Q9Y4B6 1507 aa35.24■■■■□ 3.23
SAAL1-201ENST00000300013 ABCC9O60706 1549 aa35.22■■■■□ 3.23
SAAL1-201ENST00000300013 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
SAAL1-201ENST00000300013 MYO15BQ96JP2 1530 aa34.89■■■■□ 3.18
SAAL1-201ENST00000300013 NACADO15069 1562 aa34.71■■■■□ 3.15
SAAL1-201ENST00000300013 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
SAAL1-201ENST00000300013 RB1CC1Q8TDY2 1594 aa34.46■■■■□ 3.11
SAAL1-201ENST00000300013 SCRIBQ14160 1630 aa34.14■■■■□ 3.06
SAAL1-201ENST00000300013 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
SAAL1-201ENST00000300013 BICRAQ9NZM4 1560 aa33.35■■■□□ 2.93
SAAL1-201ENST00000300013 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
SAAL1-201ENST00000300013 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
SAAL1-201ENST00000300013 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
SAAL1-201ENST00000300013 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
SAAL1-201ENST00000300013 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
SAAL1-201ENST00000300013 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
SAAL1-201ENST00000300013 SMARCA4P51532 1647 aa32.75■■■□□ 2.83
SAAL1-201ENST00000300013 WIZO95785 1651 aa32.57■■■□□ 2.8
SAAL1-201ENST00000300013 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
SAAL1-201ENST00000300013 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
SAAL1-201ENST00000300013 TOP2AP11388 1531 aaKnown RBP32.27■■■□□ 2.76
SAAL1-201ENST00000300013 SMARCA2P51531 1590 aa32.26■■■□□ 2.76
SAAL1-201ENST00000300013 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
SAAL1-201ENST00000300013 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
SAAL1-201ENST00000300013 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
SAAL1-201ENST00000300013 HMGXB3Q12766 1538 aa31.97■■■□□ 2.71
SAAL1-201ENST00000300013 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
SAAL1-201ENST00000300013 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
SAAL1-201ENST00000300013 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
SAAL1-201ENST00000300013 CFTRP13569 1480 aa31.22■■■□□ 2.59
SAAL1-201ENST00000300013 TRIM41Q8WV44 630 aa31.2■■■□□ 2.59
SAAL1-201ENST00000300013 PRDM2Q13029 1718 aa31.2■■■□□ 2.59
SAAL1-201ENST00000300013 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
SAAL1-201ENST00000300013 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
SAAL1-201ENST00000300013 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
SAAL1-201ENST00000300013 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
SAAL1-201ENST00000300013 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
SAAL1-201ENST00000300013 SYNJ1O43426 1573 aa30.87■■■□□ 2.53
SAAL1-201ENST00000300013 NESP48681 1621 aa30.86■■■□□ 2.53
SAAL1-201ENST00000300013 TOP2BQ02880 1626 aa30.81■■■□□ 2.52
SAAL1-201ENST00000300013 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
SAAL1-201ENST00000300013 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
SAAL1-201ENST00000300013 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
SAAL1-201ENST00000300013 CUX1P39880 1505 aa30.71■■■□□ 2.51
SAAL1-201ENST00000300013 CEP164Q9UPV0 1460 aa30.65■■■□□ 2.5
SAAL1-201ENST00000300013 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
SAAL1-201ENST00000300013 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
SAAL1-201ENST00000300013 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
SAAL1-201ENST00000300013 EEA1Q15075 1411 aa30.54■■■□□ 2.48
SAAL1-201ENST00000300013 SOGA1O94964 1423 aa30.5■■■□□ 2.47
SAAL1-201ENST00000300013 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
SAAL1-201ENST00000300013 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
SAAL1-201ENST00000300013 URB2Q14146 1524 aaKnown RBP30.41■■■□□ 2.46
SAAL1-201ENST00000300013 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
SAAL1-201ENST00000300013 LOC105371045A0A1W2PR82 267 aa30.37■■■□□ 2.45
SAAL1-201ENST00000300013 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
SAAL1-201ENST00000300013 CSRNP3Q8WYN3 585 aa30.31■■■□□ 2.44
SAAL1-201ENST00000300013 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
SAAL1-201ENST00000300013 ERCC6Q03468 1493 aa30.27■■■□□ 2.44
SAAL1-201ENST00000300013 KIF27Q86VH2 1401 aa30.26■■■□□ 2.43
SAAL1-201ENST00000300013 CUX2O14529 1486 aa30.18■■■□□ 2.42
SAAL1-201ENST00000300013 WDR62O43379 1518 aa30.17■■■□□ 2.42
SAAL1-201ENST00000300013 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
SAAL1-201ENST00000300013 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
SAAL1-201ENST00000300013 KIF21BO75037 1637 aa30.14■■■□□ 2.42
SAAL1-201ENST00000300013 WDR97A6NE52 1622 aa30.12■■■□□ 2.41
SAAL1-201ENST00000300013 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
SAAL1-201ENST00000300013 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
SAAL1-201ENST00000300013 EHMT2Q96KQ7 1210 aa30.07■■■□□ 2.4
SAAL1-201ENST00000300013 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
SAAL1-201ENST00000300013 PRXQ9BXM0 1461 aa29.98■■■□□ 2.39
SAAL1-201ENST00000300013 ERICH3Q5RHP9 1530 aa29.97■■■□□ 2.39
SAAL1-201ENST00000300013 ABCA5Q8WWZ7 1642 aa29.95■■■□□ 2.38
SAAL1-201ENST00000300013 IGF1RP08069 1367 aa29.94■■■□□ 2.38
SAAL1-201ENST00000300013 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
SAAL1-201ENST00000300013 TNIKQ9UKE5 1360 aa29.93■■■□□ 2.38
SAAL1-201ENST00000300013 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
SAAL1-201ENST00000300013 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
SAAL1-201ENST00000300013 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
SAAL1-201ENST00000300013 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
SAAL1-201ENST00000300013 CUL7Q14999 1698 aa29.85■■■□□ 2.37
SAAL1-201ENST00000300013 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
SAAL1-201ENST00000300013 PBRM1Q86U86 1689 aa29.78■■■□□ 2.36
SAAL1-201ENST00000300013 CEP162Q5TB80 1403 aa29.74■■■□□ 2.35
SAAL1-201ENST00000300013 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.344e-8■■□□□ 13.7
SAAL1-201ENST00000300013 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
SAAL1-201ENST00000300013 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
SAAL1-201ENST00000300013 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
SAAL1-201ENST00000300013 ADAMTS12P58397 1594 aa29.56■■■□□ 2.32
SAAL1-201ENST00000300013 FHAD1B1AJZ9 1412 aa29.56■■■□□ 2.32
SAAL1-201ENST00000300013 CLIP1P30622 1438 aa29.56■■■□□ 2.32
SAAL1-201ENST00000300013 CTTNBP2Q8WZ74 1663 aa29.51■■■□□ 2.31
SAAL1-201ENST00000300013 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
SAAL1-201ENST00000300013 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
SAAL1-201ENST00000300013 RANGAP1P46060 587 aaPredicted RBP29.38■■■□□ 2.29
SAAL1-201ENST00000300013 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
SAAL1-201ENST00000300013 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms