Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.842e-47■■□□□ 12.5
LARP4Q71RC2 RPL23-211ENST00000584912 2779 ntTSL 1 (best)9.16□□□□□ -0.942e-47■■□□□ 12.5
LARP4Q71RC2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.04■□□□□ 0.165e-7■■□□□ 12.5
LARP4Q71RC2 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.641e-323■■□□□ 12.5
LARP4Q71RC2 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.731e-323■■□□□ 12.5
LARP4Q71RC2 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)12.99□□□□□ -0.331e-8■■□□□ 12.5
LARP4Q71RC2 H3F3B-203ENST00000586518 1701 nt29.34■■■□□ 2.293e-9■■□□□ 12.5
LARP4Q71RC2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.253e-9■■□□□ 12.5
LARP4Q71RC2 H3F3B-213ENST00000593254 894 ntTSL 512□□□□□ -0.493e-9■■□□□ 12.5
LARP4Q71RC2 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC10.96□□□□□ -0.653e-9■■□□□ 12.5
LARP4Q71RC2 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC9.81□□□□□ -0.843e-9■■□□□ 12.5
LARP4Q71RC2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.178e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.55■□□□□ 0.728e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-204ENST00000527148 684 ntTSL 219.19■□□□□ 0.668e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-207ENST00000531013 795 ntTSL 217.52■□□□□ 0.48e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-205ENST00000529462 2778 ntTSL 215.02□□□□□ -0.018e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-206ENST00000530807 498 ntTSL 214.77□□□□□ -0.058e-18■■□□□ 12.5
LARP4Q71RC2 SLC39A4-209ENST00000532718 668 ntTSL 1 (best)13.83□□□□□ -0.28e-18■■□□□ 12.5
LARP4Q71RC2 RPS3-213ENST00000529285 550 ntTSL 519.23■□□□□ 0.671e-16■■□□□ 12.5
LARP4Q71RC2 TFR2-204ENST00000462090 1844 ntTSL 518.55■□□□□ 0.562e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-213ENST00000490084 2196 ntTSL 217.13■□□□□ 0.332e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-212ENST00000476304 2421 ntTSL 517.07■□□□□ 0.322e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.11■□□□□ 0.172e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.242e-7■■□□□ 12.5
LARP4Q71RC2 TFR2-206ENST00000465294 2763 ntTSL 213.31□□□□□ -0.282e-7■■□□□ 12.5
LARP4Q71RC2 SEMA3B-208ENST00000456210 2065 ntTSL 218.99■□□□□ 0.635e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.535e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.385e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.285e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)16.55■□□□□ 0.245e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-214ENST00000619119 3158 ntTSL 515.4■□□□□ 0.065e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.055e-12■■□□□ 12.5
LARP4Q71RC2 SEMA3B-203ENST00000419007 3283 ntTSL 215.19■□□□□ 0.025e-12■■□□□ 12.5
LARP4Q71RC2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.292e-6■■□□□ 12.5
LARP4Q71RC2 SNF8-217ENST00000576353 700 ntTSL 521.53■■□□□ 1.042e-6■■□□□ 12.5
LARP4Q71RC2 SNF8-209ENST00000510558 1051 ntTSL 520.94■□□□□ 0.942e-6■■□□□ 12.5
LARP4Q71RC2 SNF8-216ENST00000573795 583 ntTSL 519.88■□□□□ 0.772e-6■■□□□ 12.5
LARP4Q71RC2 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.882e-6■■□□□ 12.5
LARP4Q71RC2 SNF8-207ENST00000509995 560 ntTSL 39.42□□□□□ -0.92e-6■■□□□ 12.5
LARP4Q71RC2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.481e-6■■□□□ 12.5
LARP4Q71RC2 NME1-210ENST00000512768 1056 ntTSL 1 (best)17.09■□□□□ 0.338e-9■■□□□ 12.5
LARP4Q71RC2 RPL6-211ENST00000552455 781 ntTSL 210.64□□□□□ -0.712e-7■■□□□ 12.5
LARP4Q71RC2 RPL6-209ENST00000551041 1082 ntTSL 29.76□□□□□ -0.852e-7■■□□□ 12.5
LARP4Q71RC2 RPL6-203ENST00000546368 2008 ntTSL 58.92□□□□□ -0.982e-7■■□□□ 12.5
LARP4Q71RC2 RPL6-207ENST00000550238 338 ntTSL 56.93□□□□□ -1.32e-7■■□□□ 12.5
LARP4Q71RC2 RPL6-210ENST00000551291 700 ntTSL 36.31□□□□□ -1.42e-7■■□□□ 12.5
LARP4Q71RC2 CSNK2B-205ENST00000465481 579 ntTSL 1 (best)12.82□□□□□ -0.361e-7■■□□□ 12.5
LARP4Q71RC2 CSNK2B-207ENST00000475875 590 ntTSL 1 (best)12.82□□□□□ -0.361e-7■■□□□ 12.5
LARP4Q71RC2 CSNK2B-208ENST00000481269 785 ntTSL 210.51□□□□□ -0.731e-7■■□□□ 12.5
LARP4Q71RC2 SLC2A1-208ENST00000630287 2398 ntTSL 515.41■□□□□ 0.061e-19■■□□□ 12.5
LARP4Q71RC2 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.461e-19■■□□□ 12.5
LARP4Q71RC2 MIR6820-201ENST00000611508 62 ntBASIC4.15□□□□□ -1.758e-8■■□□□ 12.5
LARP4Q71RC2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.7■□□□□ 0.589e-11■■□□□ 12.4
LARP4Q71RC2 DYNLRB1-204ENST00000480759 1053 ntTSL 39.72□□□□□ -0.859e-11■■□□□ 12.4
LARP4Q71RC2 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.249e-11■■□□□ 12.4
LARP4Q71RC2 HES4-203ENST00000481869 1038 ntTSL 226.63■■□□□ 1.855e-6■■□□□ 12.4
LARP4Q71RC2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.715e-6■■□□□ 12.4
LARP4Q71RC2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.395e-6■■□□□ 12.4
LARP4Q71RC2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.245e-6■■□□□ 12.4
LARP4Q71RC2 ALG1-206ENST00000591822 1689 ntTSL 1 (best)22.73■■□□□ 1.232e-8■■□□□ 12.4
LARP4Q71RC2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.66■■□□□ 1.225e-6■■□□□ 12.4
LARP4Q71RC2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.195e-6■■□□□ 12.4
LARP4Q71RC2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.185e-6■■□□□ 12.4
LARP4Q71RC2 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.3■■□□□ 1.165e-6■■□□□ 12.4
LARP4Q71RC2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.072e-8■■□□□ 12.4
LARP4Q71RC2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.065e-6■■□□□ 12.4
LARP4Q71RC2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.915e-6■■□□□ 12.4
LARP4Q71RC2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.865e-6■■□□□ 12.4
LARP4Q71RC2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.865e-6■■□□□ 12.4
LARP4Q71RC2 ACSS2-211ENST00000477932 2450 ntTSL 520.24■□□□□ 0.835e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.99■□□□□ 0.795e-6■■□□□ 12.4
LARP4Q71RC2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.765e-6■■□□□ 12.4
LARP4Q71RC2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.726e-11■■□□□ 12.4
LARP4Q71RC2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.57■□□□□ 0.722e-8■■□□□ 12.4
LARP4Q71RC2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.51■□□□□ 0.716e-11■■□□□ 12.4
LARP4Q71RC2 PRMT1-204ENST00000525616 780 ntTSL 219.45■□□□□ 0.75e-6■■□□□ 12.4
LARP4Q71RC2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.98■□□□□ 0.635e-6■■□□□ 12.4
LARP4Q71RC2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.515e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.99■□□□□ 0.475e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-215ENST00000576496 937 ntAPPRIS ALT2 TSL 1 (best)17.82■□□□□ 0.445e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-211ENST00000573699 864 ntTSL 317.78■□□□□ 0.445e-6■■□□□ 12.4
LARP4Q71RC2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.75■□□□□ 0.435e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.425e-6■■□□□ 12.4
LARP4Q71RC2 H2AFY-210ENST00000506671 1905 ntTSL 517.64■□□□□ 0.412e-8■■□□□ 12.4
LARP4Q71RC2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-6■■□□□ 12.4
LARP4Q71RC2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.395e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-220ENST00000534676 915 ntTSL 217.27■□□□□ 0.365e-6■■□□□ 12.4
LARP4Q71RC2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.355e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-213ENST00000574841 510 ntTSL 217.19■□□□□ 0.345e-6■■□□□ 12.4
LARP4Q71RC2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.336e-11■■□□□ 12.4
LARP4Q71RC2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.35e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.83■□□□□ 0.285e-6■■□□□ 12.4
LARP4Q71RC2 ACSS2-210ENST00000476922 1527 ntTSL 216.79■□□□□ 0.285e-6■■□□□ 12.4
LARP4Q71RC2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.285e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-218ENST00000534280 766 ntTSL 316.78■□□□□ 0.285e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.72■□□□□ 0.275e-6■■□□□ 12.4
LARP4Q71RC2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.265e-6■■□□□ 12.4
LARP4Q71RC2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.31■□□□□ 0.25e-6■■□□□ 12.4
LARP4Q71RC2 SYS1-DBNDD2-203ENST00000458187 673 ntAPPRIS P5 TSL 516.21■□□□□ 0.195e-6■■□□□ 12.4
Retrieved 100 of 15,922 protein–RNA pairs in 161.4 ms