RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
CSNK2B-207ENST00000475875 ABCC9O60706 1549 aa34.81■■■■□ 3.16
CSNK2B-207ENST00000475875 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
CSNK2B-207ENST00000475875 DNAJC5BQ9UF47 199 aa33.42■■■□□ 2.94
CSNK2B-207ENST00000475875 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
CSNK2B-207ENST00000475875 NACADO15069 1562 aa32.45■■■□□ 2.79
CSNK2B-207ENST00000475875 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
CSNK2B-207ENST00000475875 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
CSNK2B-207ENST00000475875 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
CSNK2B-207ENST00000475875 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
CSNK2B-207ENST00000475875 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
CSNK2B-207ENST00000475875 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
CSNK2B-207ENST00000475875 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
CSNK2B-207ENST00000475875 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
CSNK2B-207ENST00000475875 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
CSNK2B-207ENST00000475875 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
CSNK2B-207ENST00000475875 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
CSNK2B-207ENST00000475875 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
CSNK2B-207ENST00000475875 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
CSNK2B-207ENST00000475875 CUX2O14529 1486 aa30.5■■■□□ 2.47
CSNK2B-207ENST00000475875 ERCC6Q03468 1493 aa30.18■■■□□ 2.42
CSNK2B-207ENST00000475875 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
CSNK2B-207ENST00000475875 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
CSNK2B-207ENST00000475875 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
CSNK2B-207ENST00000475875 NESP48681 1621 aa29.64■■■□□ 2.34
CSNK2B-207ENST00000475875 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
CSNK2B-207ENST00000475875 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
CSNK2B-207ENST00000475875 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
CSNK2B-207ENST00000475875 SMARCA4P51532 1647 aa29.43■■■□□ 2.3
CSNK2B-207ENST00000475875 LAMC3Q9Y6N6 1575 aa29.42■■■□□ 2.3
CSNK2B-207ENST00000475875 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
CSNK2B-207ENST00000475875 PDS5BQ9NTI5 1447 aa29.3■■■□□ 2.28
CSNK2B-207ENST00000475875 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
CSNK2B-207ENST00000475875 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
CSNK2B-207ENST00000475875 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CSNK2B-207ENST00000475875 MRC2Q9UBG0 1479 aa29.06■■■□□ 2.24
CSNK2B-207ENST00000475875 WDR62O43379 1518 aa29.03■■■□□ 2.24
CSNK2B-207ENST00000475875 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
CSNK2B-207ENST00000475875 OSCARQ8IYS5 282 aa28.92■■■□□ 2.22
CSNK2B-207ENST00000475875 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
CSNK2B-207ENST00000475875 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
CSNK2B-207ENST00000475875 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
CSNK2B-207ENST00000475875 RIMBP3CA6NJZ7 1639 aa28.57■■■□□ 2.16
CSNK2B-207ENST00000475875 RIMBP3BA6NNM3 1639 aa28.57■■■□□ 2.16
CSNK2B-207ENST00000475875 RIMBP3Q9UFD9 1639 aa28.57■■■□□ 2.16
CSNK2B-207ENST00000475875 CFTRP13569 1480 aa28.5■■■□□ 2.15
CSNK2B-207ENST00000475875 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
CSNK2B-207ENST00000475875 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
CSNK2B-207ENST00000475875 WIZO95785 1651 aa28.41■■■□□ 2.14
CSNK2B-207ENST00000475875 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
CSNK2B-207ENST00000475875 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
CSNK2B-207ENST00000475875 ZNF608Q9ULD9 1512 aaPredicted RBP28.2■■■□□ 2.1
CSNK2B-207ENST00000475875 TRHP20396 242 aaPredicted RBP28.18■■■□□ 2.1
CSNK2B-207ENST00000475875 TOP2AP11388 1531 aaKnown RBP28.09■■■□□ 2.09
CSNK2B-207ENST00000475875 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
CSNK2B-207ENST00000475875 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
CSNK2B-207ENST00000475875 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
CSNK2B-207ENST00000475875 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
CSNK2B-207ENST00000475875 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
CSNK2B-207ENST00000475875 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
CSNK2B-207ENST00000475875 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
CSNK2B-207ENST00000475875 CHD1O14646 1710 aa27.9■■■□□ 2.06
CSNK2B-207ENST00000475875 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.054e-8■■■■□ 24.4
CSNK2B-207ENST00000475875 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
CSNK2B-207ENST00000475875 FBLN2P98095 1184 aa27.8■■■□□ 2.04
CSNK2B-207ENST00000475875 TARBP1Q13395 1621 aaKnown RBP27.8■■■□□ 2.04
CSNK2B-207ENST00000475875 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.03
CSNK2B-207ENST00000475875 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
CSNK2B-207ENST00000475875 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
CSNK2B-207ENST00000475875 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
CSNK2B-207ENST00000475875 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
CSNK2B-207ENST00000475875 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
CSNK2B-207ENST00000475875 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
CSNK2B-207ENST00000475875 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
CSNK2B-207ENST00000475875 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
CSNK2B-207ENST00000475875 SOGA1O94964 1423 aa27.52■■■□□ 2
CSNK2B-207ENST00000475875 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
CSNK2B-207ENST00000475875 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
CSNK2B-207ENST00000475875 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
CSNK2B-207ENST00000475875 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
CSNK2B-207ENST00000475875 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
CSNK2B-207ENST00000475875 CUX1P39880 1505 aa27.16■■□□□ 1.94
CSNK2B-207ENST00000475875 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
CSNK2B-207ENST00000475875 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
CSNK2B-207ENST00000475875 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
CSNK2B-207ENST00000475875 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
CSNK2B-207ENST00000475875 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
CSNK2B-207ENST00000475875 CEP170Q5SW79 1584 aa27.03■■□□□ 1.92
CSNK2B-207ENST00000475875 NUP160Q12769 1436 aa27.01■■□□□ 1.91
CSNK2B-207ENST00000475875 KIF13AQ9H1H9 1805 aa27■■□□□ 1.91
CSNK2B-207ENST00000475875 SHROOM2Q13796 1616 aa26.95■■□□□ 1.91
CSNK2B-207ENST00000475875 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
CSNK2B-207ENST00000475875 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
CSNK2B-207ENST00000475875 ABCC10Q5T3U5 1492 aa26.87■■□□□ 1.89
CSNK2B-207ENST00000475875 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
CSNK2B-207ENST00000475875 KDM4FA0A1W2PPD8 638 aa26.83■■□□□ 1.89
CSNK2B-207ENST00000475875 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
CSNK2B-207ENST00000475875 MAPKBP1O60336 1514 aa26.78■■□□□ 1.88
CSNK2B-207ENST00000475875 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
CSNK2B-207ENST00000475875 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms