RNA–Protein interactions for RNA: ENST00000481269.1

CSNK2B-208, Transcript of casein kinase 2 beta, humanhuman

TSL 2

Gene CSNK2B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-208ENST00000481269 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
CSNK2B-208ENST00000481269 ABCC9O60706 1549 aa27.57■■■□□ 2
CSNK2B-208ENST00000481269 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
CSNK2B-208ENST00000481269 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
CSNK2B-208ENST00000481269 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
CSNK2B-208ENST00000481269 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
CSNK2B-208ENST00000481269 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
CSNK2B-208ENST00000481269 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
CSNK2B-208ENST00000481269 NACADO15069 1562 aa24.88■■□□□ 1.57
CSNK2B-208ENST00000481269 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
CSNK2B-208ENST00000481269 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
CSNK2B-208ENST00000481269 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
CSNK2B-208ENST00000481269 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
CSNK2B-208ENST00000481269 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
CSNK2B-208ENST00000481269 CUX2O14529 1486 aa24.32■■□□□ 1.48
CSNK2B-208ENST00000481269 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
CSNK2B-208ENST00000481269 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
CSNK2B-208ENST00000481269 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
CSNK2B-208ENST00000481269 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
CSNK2B-208ENST00000481269 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
CSNK2B-208ENST00000481269 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
CSNK2B-208ENST00000481269 NESP48681 1621 aa23.22■■□□□ 1.31
CSNK2B-208ENST00000481269 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
CSNK2B-208ENST00000481269 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
CSNK2B-208ENST00000481269 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
CSNK2B-208ENST00000481269 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
CSNK2B-208ENST00000481269 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
CSNK2B-208ENST00000481269 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
CSNK2B-208ENST00000481269 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
CSNK2B-208ENST00000481269 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
CSNK2B-208ENST00000481269 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
CSNK2B-208ENST00000481269 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
CSNK2B-208ENST00000481269 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
CSNK2B-208ENST00000481269 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
CSNK2B-208ENST00000481269 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
CSNK2B-208ENST00000481269 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
CSNK2B-208ENST00000481269 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
CSNK2B-208ENST00000481269 ILDR1Q86SU0 546 aaPredicted RBP22.68■■□□□ 1.22
CSNK2B-208ENST00000481269 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
CSNK2B-208ENST00000481269 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
CSNK2B-208ENST00000481269 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
CSNK2B-208ENST00000481269 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
CSNK2B-208ENST00000481269 WDR62O43379 1518 aa22.54■■□□□ 1.2
CSNK2B-208ENST00000481269 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
CSNK2B-208ENST00000481269 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
CSNK2B-208ENST00000481269 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
CSNK2B-208ENST00000481269 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
CSNK2B-208ENST00000481269 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
CSNK2B-208ENST00000481269 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
CSNK2B-208ENST00000481269 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
CSNK2B-208ENST00000481269 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
CSNK2B-208ENST00000481269 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
CSNK2B-208ENST00000481269 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
CSNK2B-208ENST00000481269 FBLN2P98095 1184 aa21.91■■□□□ 1.1
CSNK2B-208ENST00000481269 IFT140Q96RY7 1462 aa21.83■■□□□ 1.09
CSNK2B-208ENST00000481269 CHD1O14646 1710 aa21.77■■□□□ 1.08
CSNK2B-208ENST00000481269 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
CSNK2B-208ENST00000481269 KDM4FA0A1W2PPD8 638 aa21.73■■□□□ 1.07
CSNK2B-208ENST00000481269 CFTRP13569 1480 aa21.7■■□□□ 1.06
CSNK2B-208ENST00000481269 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
CSNK2B-208ENST00000481269 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.053e-8■■■■□ 26.6
CSNK2B-208ENST00000481269 FBXO41Q8TF61 875 aa21.53■■□□□ 1.04
CSNK2B-208ENST00000481269 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
CSNK2B-208ENST00000481269 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
CSNK2B-208ENST00000481269 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
CSNK2B-208ENST00000481269 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
CSNK2B-208ENST00000481269 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
CSNK2B-208ENST00000481269 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
CSNK2B-208ENST00000481269 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
CSNK2B-208ENST00000481269 WIZO95785 1651 aa21.37■■□□□ 1.01
CSNK2B-208ENST00000481269 HECW2Q9P2P5 1572 aa21.32■■□□□ 1
CSNK2B-208ENST00000481269 SOCS7O14512 581 aa21.32■■□□□ 1
CSNK2B-208ENST00000481269 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
CSNK2B-208ENST00000481269 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
CSNK2B-208ENST00000481269 ABCC8Q09428 1581 aa21.27■■□□□ 1
CSNK2B-208ENST00000481269 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
CSNK2B-208ENST00000481269 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
CSNK2B-208ENST00000481269 FAM69CQ0P6D2 419 aa21.25■□□□□ 0.99
CSNK2B-208ENST00000481269 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
CSNK2B-208ENST00000481269 ILDR2Q71H61 639 aa21.19■□□□□ 0.98
CSNK2B-208ENST00000481269 KDM6BO15054 1643 aa21.18■□□□□ 0.98
CSNK2B-208ENST00000481269 ADGRL1O94910 1474 aa21.16■□□□□ 0.98
CSNK2B-208ENST00000481269 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
CSNK2B-208ENST00000481269 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
CSNK2B-208ENST00000481269 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
CSNK2B-208ENST00000481269 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
CSNK2B-208ENST00000481269 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
CSNK2B-208ENST00000481269 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
CSNK2B-208ENST00000481269 SOGA1O94964 1423 aa21.07■□□□□ 0.96
CSNK2B-208ENST00000481269 DISP3Q9P2K9 1392 aa21.07■□□□□ 0.96
CSNK2B-208ENST00000481269 GRIN2BQ13224 1484 aa21.03■□□□□ 0.96
CSNK2B-208ENST00000481269 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
CSNK2B-208ENST00000481269 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
CSNK2B-208ENST00000481269 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
CSNK2B-208ENST00000481269 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
CSNK2B-208ENST00000481269 DIP2BQ9P265 1576 aa20.93■□□□□ 0.94
CSNK2B-208ENST00000481269 TSPOAP1O95153 1857 aa20.84■□□□□ 0.93
CSNK2B-208ENST00000481269 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
CSNK2B-208ENST00000481269 MAPKBP1O60336 1514 aa20.83■□□□□ 0.92
CSNK2B-208ENST00000481269 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms