RNA–Protein interactions for RNA: ENST00000552455.5

RPL6-211, Transcript of ribosomal protein L6, humanhuman

TSL 2

Gene RPL6, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL6-211ENST00000552455 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
RPL6-211ENST00000552455 CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
RPL6-211ENST00000552455 ABCC9O60706 1549 aa25.69■■□□□ 1.7
RPL6-211ENST00000552455 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
RPL6-211ENST00000552455 NACADO15069 1562 aa24.54■■□□□ 1.52
RPL6-211ENST00000552455 MYO15BQ96JP2 1530 aa24.32■■□□□ 1.48
RPL6-211ENST00000552455 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
RPL6-211ENST00000552455 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
RPL6-211ENST00000552455 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
RPL6-211ENST00000552455 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
RPL6-211ENST00000552455 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
RPL6-211ENST00000552455 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
RPL6-211ENST00000552455 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
RPL6-211ENST00000552455 SHROOM4Q9ULL8 1493 aa23.7■■□□□ 1.38
RPL6-211ENST00000552455 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
RPL6-211ENST00000552455 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
RPL6-211ENST00000552455 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
RPL6-211ENST00000552455 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
RPL6-211ENST00000552455 NCAPD3P42695 1498 aa22.64■■□□□ 1.21
RPL6-211ENST00000552455 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
RPL6-211ENST00000552455 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
RPL6-211ENST00000552455 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
RPL6-211ENST00000552455 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
RPL6-211ENST00000552455 HMGXB3Q12766 1538 aa22.49■■□□□ 1.19
RPL6-211ENST00000552455 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
RPL6-211ENST00000552455 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
RPL6-211ENST00000552455 MROH2BQ7Z745 1585 aa22.3■■□□□ 1.16
RPL6-211ENST00000552455 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
RPL6-211ENST00000552455 CUX2O14529 1486 aa22.18■■□□□ 1.14
RPL6-211ENST00000552455 NESP48681 1621 aa22.11■■□□□ 1.13
RPL6-211ENST00000552455 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
RPL6-211ENST00000552455 WIZO95785 1651 aa22.04■■□□□ 1.12
RPL6-211ENST00000552455 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
RPL6-211ENST00000552455 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
RPL6-211ENST00000552455 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
RPL6-211ENST00000552455 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
RPL6-211ENST00000552455 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
RPL6-211ENST00000552455 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
RPL6-211ENST00000552455 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
RPL6-211ENST00000552455 CFTRP13569 1480 aa21.73■■□□□ 1.07
RPL6-211ENST00000552455 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
RPL6-211ENST00000552455 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
RPL6-211ENST00000552455 WDR62O43379 1518 aa21.68■■□□□ 1.06
RPL6-211ENST00000552455 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
RPL6-211ENST00000552455 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
RPL6-211ENST00000552455 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
RPL6-211ENST00000552455 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
RPL6-211ENST00000552455 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
RPL6-211ENST00000552455 TOPBP1Q92547 1522 aa21.28■■□□□ 1
RPL6-211ENST00000552455 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
RPL6-211ENST00000552455 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
RPL6-211ENST00000552455 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
RPL6-211ENST00000552455 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
RPL6-211ENST00000552455 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
RPL6-211ENST00000552455 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
RPL6-211ENST00000552455 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
RPL6-211ENST00000552455 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
RPL6-211ENST00000552455 SOGA1O94964 1423 aa20.99■□□□□ 0.95
RPL6-211ENST00000552455 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.953e-10■■■■■ 33.3
RPL6-211ENST00000552455 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
RPL6-211ENST00000552455 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
RPL6-211ENST00000552455 CUX1P39880 1505 aa20.94■□□□□ 0.94
RPL6-211ENST00000552455 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
RPL6-211ENST00000552455 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
RPL6-211ENST00000552455 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
RPL6-211ENST00000552455 CHD1O14646 1710 aa20.87■□□□□ 0.93
RPL6-211ENST00000552455 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
RPL6-211ENST00000552455 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
RPL6-211ENST00000552455 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
RPL6-211ENST00000552455 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
RPL6-211ENST00000552455 FBLN2P98095 1184 aa20.8■□□□□ 0.92
RPL6-211ENST00000552455 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
RPL6-211ENST00000552455 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
RPL6-211ENST00000552455 SNAPC4Q5SXM2 1469 aa20.77■□□□□ 0.92
RPL6-211ENST00000552455 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
RPL6-211ENST00000552455 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
RPL6-211ENST00000552455 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
RPL6-211ENST00000552455 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
RPL6-211ENST00000552455 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
RPL6-211ENST00000552455 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
RPL6-211ENST00000552455 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
RPL6-211ENST00000552455 PBRM1Q86U86 1689 aa20.7■□□□□ 0.91
RPL6-211ENST00000552455 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
RPL6-211ENST00000552455 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
RPL6-211ENST00000552455 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
RPL6-211ENST00000552455 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
RPL6-211ENST00000552455 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
RPL6-211ENST00000552455 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
RPL6-211ENST00000552455 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
RPL6-211ENST00000552455 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
RPL6-211ENST00000552455 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
RPL6-211ENST00000552455 NUP160Q12769 1436 aa20.45■□□□□ 0.86
RPL6-211ENST00000552455 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
RPL6-211ENST00000552455 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
RPL6-211ENST00000552455 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
RPL6-211ENST00000552455 TRHP20396 242 aaPredicted RBP20.31■□□□□ 0.84
RPL6-211ENST00000552455 CUL7Q14999 1698 aa20.27■□□□□ 0.84
RPL6-211ENST00000552455 IGF1RP08069 1367 aa20.27■□□□□ 0.84
RPL6-211ENST00000552455 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
RPL6-211ENST00000552455 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms