RNA–Protein interactions for RNA: ENST00000617535.4

TACC3-213, Transcript of transforming acidic coiled-coil containing protein 3, human

TSL 5 BASIC

Gene TACC3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TACC3-213	ENST00000617535	NISCH	Q9Y2I1	1504 aa		46.57	■■■■■ 5.04
TACC3-213	ENST00000617535	CCDC180	Q9P1Z9	1646 aa		40.83	■■■■■ 4.13
TACC3-213	ENST00000617535	ZCCHC6	Q5VYS8	1495 aa	Known RBP	39.03	■■■■□ 3.84
TACC3-213	ENST00000617535	ABCC9	O60706	1549 aa		38.9	■■■■□ 3.82
TACC3-213	ENST00000617535	DCAF8L2	P0C7V8	631 aa		38.62	■■■■□ 3.77
TACC3-213	ENST00000617535	DCAF1	Q9Y4B6	1507 aa		38.48	■■■■□ 3.75
TACC3-213	ENST00000617535	MYO15B	Q96JP2	1530 aa		38.16	■■■■□ 3.7
TACC3-213	ENST00000617535	NACAD	O15069	1562 aa		38.08	■■■■□ 3.69
TACC3-213	ENST00000617535	RB1CC1	Q8TDY2	1594 aa		37.85	■■■■□ 3.65
TACC3-213	ENST00000617535	SHROOM4	Q9ULL8	1493 aa		37.74	■■■■□ 3.63
TACC3-213	ENST00000617535	SCRIB	Q14160	1630 aa		37.48	■■■■□ 3.59
TACC3-213	ENST00000617535	UNC13A	Q9UPW8	1703 aa		37.17	■■■■□ 3.54
TACC3-213	ENST00000617535	BICRA	Q9NZM4	1560 aa		36.71	■■■■□ 3.47
TACC3-213	ENST00000617535	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.61	■■■■□ 3.45
TACC3-213	ENST00000617535	CECR2	Q9BXF3	1484 aa		36.21	■■■■□ 3.39
TACC3-213	ENST00000617535	SUPT5H	O00267	1087 aa	Known RBP	36.13	■■■■□ 3.37
TACC3-213	ENST00000617535	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.99	■■■■□ 3.35
TACC3-213	ENST00000617535	MROH2B	Q7Z745	1585 aa		35.97	■■■■□ 3.35
TACC3-213	ENST00000617535	RSF1	Q96T23	1441 aa	Predicted RBP	35.96	■■■■□ 3.35
TACC3-213	ENST00000617535	SMARCA4	P51532	1647 aa		35.9	■■■■□ 3.34
TACC3-213	ENST00000617535	WIZ	O95785	1651 aa		35.7	■■■■□ 3.31
TACC3-213	ENST00000617535	EIF4G1	Q04637	1599 aa	Known RBP	35.64	■■■■□ 3.3
TACC3-213	ENST00000617535	PEG3	Q9GZU2	1588 aa		35.45	■■■■□ 3.27
TACC3-213	ENST00000617535	ATAD2B	Q9ULI0	1458 aa		35.37	■■■■□ 3.25
TACC3-213	ENST00000617535	SMARCA2	P51531	1590 aa		35.35	■■■■□ 3.25
TACC3-213	ENST00000617535	TOP2A	P11388	1531 aa	Known RBP	35.28	■■■■□ 3.24
TACC3-213	ENST00000617535	CC2D2A	Q9P2K1	1620 aa		35.22	■■■■□ 3.23
TACC3-213	ENST00000617535	BAZ1B	Q9UIG0	1483 aa	Known RBP	35.16	■■■■□ 3.22
TACC3-213	ENST00000617535	NCAPD3	P42695	1498 aa		35.12	■■■■□ 3.21
TACC3-213	ENST00000617535	HMGXB3	Q12766	1538 aa		35.05	■■■■□ 3.2
TACC3-213	ENST00000617535	CCDC88B	A6NC98	1476 aa		34.91	■■■■□ 3.18
TACC3-213	ENST00000617535	DNAJC5B	Q9UF47	199 aa		34.62	■■■■□ 3.13
TACC3-213	ENST00000617535	CHIC1	Q5VXU3	224 aa		34.38	■■■■□ 3.09
TACC3-213	ENST00000617535	CFTR	P13569	1480 aa		34.23	■■■■□ 3.07
TACC3-213	ENST00000617535	CADPS	Q9ULU8	1353 aa		34.19	■■■■□ 3.06
TACC3-213	ENST00000617535	PRDM2	Q13029	1718 aa		34.17	■■■■□ 3.06
TACC3-213	ENST00000617535	ABCC8	Q09428	1581 aa		34.08	■■■■□ 3.05
TACC3-213	ENST00000617535	NES	P48681	1621 aa		34.04	■■■■□ 3.04
TACC3-213	ENST00000617535	LAMC3	Q9Y6N6	1575 aa		34.03	■■■■□ 3.04
TACC3-213	ENST00000617535	TRIM41	Q8WV44	630 aa		34	■■■■□ 3.03
TACC3-213	ENST00000617535	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.88	■■■■□ 3.01	1e-6	■■■■□ 21.8
TACC3-213	ENST00000617535	FANCD2	Q9BXW9	1451 aa		33.83	■■■■□ 3.01
TACC3-213	ENST00000617535	SYNJ1	O43426	1573 aa		33.77	■■■■□ 3
TACC3-213	ENST00000617535	PDS5B	Q9NTI5	1447 aa		33.75	■■■□□ 2.99
TACC3-213	ENST00000617535	KIF21A	Q7Z4S6	1674 aa		33.7	■■■□□ 2.99
TACC3-213	ENST00000617535	TOP2B	Q02880	1626 aa		33.67	■■■□□ 2.98
TACC3-213	ENST00000617535	BIVM-ERCC5	R4GMW8	1640 aa		33.67	■■■□□ 2.98
TACC3-213	ENST00000617535	CEP164	Q9UPV0	1460 aa		33.66	■■■□□ 2.98
TACC3-213	ENST00000617535	CUX1	P39880	1505 aa		33.65	■■■□□ 2.98
TACC3-213	ENST00000617535	DNMBP	Q6XZF7	1577 aa		33.48	■■■□□ 2.95
TACC3-213	ENST00000617535	URB2	Q14146	1524 aa	Known RBP	33.43	■■■□□ 2.94
TACC3-213	ENST00000617535	TOPBP1	Q92547	1522 aa		33.43	■■■□□ 2.94
TACC3-213	ENST00000617535	ERCC6	Q03468	1493 aa		33.39	■■■□□ 2.94
TACC3-213	ENST00000617535	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.38	■■■□□ 2.93
TACC3-213	ENST00000617535	FGD5	Q6ZNL6	1462 aa		33.35	■■■□□ 2.93
TACC3-213	ENST00000617535	MRC2	Q9UBG0	1479 aa		33.33	■■■□□ 2.93
TACC3-213	ENST00000617535	SOGA1	O94964	1423 aa		33.33	■■■□□ 2.93
TACC3-213	ENST00000617535	RUSC2	Q8N2Y8	1516 aa		33.25	■■■□□ 2.91
TACC3-213	ENST00000617535	POLA1	P09884	1462 aa	Predicted RBP	33.23	■■■□□ 2.91
TACC3-213	ENST00000617535	THOC2	Q8NI27	1593 aa	Known RBP	33.18	■■■□□ 2.9
TACC3-213	ENST00000617535	EEA1	Q15075	1411 aa		33.18	■■■□□ 2.9
TACC3-213	ENST00000617535	WDR62	O43379	1518 aa		33.18	■■■□□ 2.9
TACC3-213	ENST00000617535	RAD54L2	Q9Y4B4	1467 aa		33.13	■■■□□ 2.89
TACC3-213	ENST00000617535	LOC105371045	A0A1W2PR82	267 aa		33.07	■■■□□ 2.89
TACC3-213	ENST00000617535	CSRNP3	Q8WYN3	585 aa		33.06	■■■□□ 2.88
TACC3-213	ENST00000617535	CUX2	O14529	1486 aa		33.06	■■■□□ 2.88
TACC3-213	ENST00000617535	KIF27	Q86VH2	1401 aa		33.05	■■■□□ 2.88
TACC3-213	ENST00000617535	ABCA10	Q8WWZ4	1543 aa		33.02	■■■□□ 2.88
TACC3-213	ENST00000617535	WDR97	A6NE52	1622 aa		33.02	■■■□□ 2.88
TACC3-213	ENST00000617535	TARBP1	Q13395	1621 aa	Known RBP	32.99	■■■□□ 2.87
TACC3-213	ENST00000617535	EHMT2	Q96KQ7	1210 aa		32.94	■■■□□ 2.86
TACC3-213	ENST00000617535	IFT140	Q96RY7	1462 aa		32.87	■■■□□ 2.85
TACC3-213	ENST00000617535	TDRD9	Q8NDG6	1382 aa	Known RBP	32.83	■■■□□ 2.85
TACC3-213	ENST00000617535	ABCA5	Q8WWZ7	1642 aa		32.82	■■■□□ 2.84
TACC3-213	ENST00000617535	KIF21B	O75037	1637 aa		32.81	■■■□□ 2.84
TACC3-213	ENST00000617535	IGF1R	P08069	1367 aa		32.78	■■■□□ 2.84
TACC3-213	ENST00000617535	GAPVD1	Q14C86	1478 aa		32.76	■■■□□ 2.84
TACC3-213	ENST00000617535	GOLGA3	Q08378	1498 aa		32.73	■■■□□ 2.83
TACC3-213	ENST00000617535	PRX	Q9BXM0	1461 aa		32.72	■■■□□ 2.83
TACC3-213	ENST00000617535	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.71	■■■□□ 2.83
TACC3-213	ENST00000617535	AQR	O60306	1485 aa	Known RBP eCLIP	32.69	■■■□□ 2.82	4e-7	■■■■□ 19.8
TACC3-213	ENST00000617535	PBRM1	Q86U86	1689 aa		32.68	■■■□□ 2.82
TACC3-213	ENST00000617535	RAPGEF2	Q9Y4G8	1499 aa		32.68	■■■□□ 2.82
TACC3-213	ENST00000617535	ERICH3	Q5RHP9	1530 aa		32.65	■■■□□ 2.82
TACC3-213	ENST00000617535	CARMIL1	Q5VZK9	1371 aa		32.63	■■■□□ 2.81
TACC3-213	ENST00000617535	UBTF	P17480	764 aa	Known RBP	32.62	■■■□□ 2.81
TACC3-213	ENST00000617535	EIF4G3	O43432	1585 aa	Known RBP	32.62	■■■□□ 2.81
TACC3-213	ENST00000617535	CUL7	Q14999	1698 aa		32.62	■■■□□ 2.81
TACC3-213	ENST00000617535	GRIN2B	Q13224	1484 aa		32.55	■■■□□ 2.8
TACC3-213	ENST00000617535	TNIK	Q9UKE5	1360 aa		32.54	■■■□□ 2.8
TACC3-213	ENST00000617535	ADAMTS12	P58397	1594 aa		32.41	■■■□□ 2.78
TACC3-213	ENST00000617535	SNAPC4	Q5SXM2	1469 aa		32.39	■■■□□ 2.77
TACC3-213	ENST00000617535	FHAD1	B1AJZ9	1412 aa		32.38	■■■□□ 2.77
TACC3-213	ENST00000617535	CEP162	Q5TB80	1403 aa		32.34	■■■□□ 2.77
TACC3-213	ENST00000617535	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.31	■■■□□ 2.76
TACC3-213	ENST00000617535	CTTNBP2	Q8WZ74	1663 aa		32.26	■■■□□ 2.75
TACC3-213	ENST00000617535	RANGAP1	P46060	587 aa	Predicted RBP	32.22	■■■□□ 2.75
TACC3-213	ENST00000617535	SYNJ2	O15056	1496 aa		32.2	■■■□□ 2.74
TACC3-213	ENST00000617535	CLIP1	P30622	1438 aa		32.18	■■■□□ 2.74
TACC3-213	ENST00000617535	GRIN2A	Q12879	1464 aa		32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms