RNA–Protein interactions for RNA: ENST00000534676.5

PRMT1-220, Transcript of protein arginine methyltransferase 1, humanhuman

TSL 2

Gene PRMT1, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT1-220ENST00000534676 NISCHQ9Y2I1 1504 aa47.67■■■■■ 5.22
PRMT1-220ENST00000534676 CCDC180Q9P1Z9 1646 aa42.66■■■■■ 4.42
PRMT1-220ENST00000534676 ABCC9O60706 1549 aa42.4■■■■■ 4.38
PRMT1-220ENST00000534676 RB1CC1Q8TDY2 1594 aa40.47■■■■■ 4.07
PRMT1-220ENST00000534676 NACADO15069 1562 aa40.29■■■■■ 4.04
PRMT1-220ENST00000534676 DCAF8L2P0C7V8 631 aa39.97■■■■□ 3.99
PRMT1-220ENST00000534676 MYO15BQ96JP2 1530 aa39.88■■■■□ 3.97
PRMT1-220ENST00000534676 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
PRMT1-220ENST00000534676 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
PRMT1-220ENST00000534676 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
PRMT1-220ENST00000534676 PABPN1Q86U42 306 aaKnown RBP eCLIP39.5■■■■□ 3.91
PRMT1-220ENST00000534676 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
PRMT1-220ENST00000534676 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.89
PRMT1-220ENST00000534676 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
PRMT1-220ENST00000534676 SCRIBQ14160 1630 aa38.82■■■■□ 3.81
PRMT1-220ENST00000534676 CC2D2AQ9P2K1 1620 aa38.34■■■■□ 3.73
PRMT1-220ENST00000534676 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
PRMT1-220ENST00000534676 CECR2Q9BXF3 1484 aa38.19■■■■□ 3.7
PRMT1-220ENST00000534676 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
PRMT1-220ENST00000534676 ATAD2BQ9ULI0 1458 aa37.12■■■■□ 3.53
PRMT1-220ENST00000534676 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
PRMT1-220ENST00000534676 SMARCA2P51531 1590 aa37■■■■□ 3.51
PRMT1-220ENST00000534676 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
PRMT1-220ENST00000534676 HMGXB3Q12766 1538 aa36.95■■■■□ 3.5
PRMT1-220ENST00000534676 PEG3Q9GZU2 1588 aa36.83■■■■□ 3.49
PRMT1-220ENST00000534676 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
PRMT1-220ENST00000534676 BAZ1BQ9UIG0 1483 aaKnown RBP36.71■■■■□ 3.47
PRMT1-220ENST00000534676 ERCC6Q03468 1493 aa36.54■■■■□ 3.44
PRMT1-220ENST00000534676 NESP48681 1621 aa36.52■■■■□ 3.44
PRMT1-220ENST00000534676 CUX2O14529 1486 aa36.49■■■■□ 3.43
PRMT1-220ENST00000534676 LAMC3Q9Y6N6 1575 aa36.31■■■■□ 3.4
PRMT1-220ENST00000534676 WIZO95785 1651 aa36.27■■■■□ 3.4
PRMT1-220ENST00000534676 DNAJC5Q9H3Z4 198 aa36.24■■■■□ 3.39
PRMT1-220ENST00000534676 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
PRMT1-220ENST00000534676 CADPSQ9ULU8 1353 aa36.07■■■■□ 3.36
PRMT1-220ENST00000534676 RSF1Q96T23 1441 aaPredicted RBP36.07■■■■□ 3.36
PRMT1-220ENST00000534676 PDS5BQ9NTI5 1447 aa36.06■■■■□ 3.36
PRMT1-220ENST00000534676 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
PRMT1-220ENST00000534676 TOP2AP11388 1531 aaKnown RBP35.84■■■■□ 3.33
PRMT1-220ENST00000534676 MRC2Q9UBG0 1479 aa35.74■■■■□ 3.31
PRMT1-220ENST00000534676 CFTRP13569 1480 aa35.73■■■■□ 3.31
PRMT1-220ENST00000534676 WDR62O43379 1518 aa35.69■■■■□ 3.3
PRMT1-220ENST00000534676 FANCD2Q9BXW9 1451 aa35.63■■■■□ 3.29
PRMT1-220ENST00000534676 CEP164Q9UPV0 1460 aa35.63■■■■□ 3.29
PRMT1-220ENST00000534676 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
PRMT1-220ENST00000534676 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
PRMT1-220ENST00000534676 PRDM2Q13029 1718 aa35.32■■■■□ 3.25
PRMT1-220ENST00000534676 TOPBP1Q92547 1522 aa35■■■■□ 3.19
PRMT1-220ENST00000534676 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
PRMT1-220ENST00000534676 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
PRMT1-220ENST00000534676 DNMBPQ6XZF7 1577 aa34.88■■■■□ 3.17
PRMT1-220ENST00000534676 ZNF608Q9ULD9 1512 aaPredicted RBP34.88■■■■□ 3.17
PRMT1-220ENST00000534676 OSCARQ8IYS5 282 aa34.83■■■■□ 3.17
PRMT1-220ENST00000534676 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.15
PRMT1-220ENST00000534676 EIF4G3O43432 1585 aaKnown RBP34.67■■■■□ 3.14
PRMT1-220ENST00000534676 POLA1P09884 1462 aaPredicted RBP34.66■■■■□ 3.14
PRMT1-220ENST00000534676 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
PRMT1-220ENST00000534676 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.121e-6■■■■■ 40.9
PRMT1-220ENST00000534676 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
PRMT1-220ENST00000534676 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
PRMT1-220ENST00000534676 CUX1P39880 1505 aa34.49■■■■□ 3.11
PRMT1-220ENST00000534676 SOGA1O94964 1423 aa34.48■■■■□ 3.11
PRMT1-220ENST00000534676 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
PRMT1-220ENST00000534676 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
PRMT1-220ENST00000534676 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
PRMT1-220ENST00000534676 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
PRMT1-220ENST00000534676 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
PRMT1-220ENST00000534676 WDR97A6NE52 1622 aa34.35■■■■□ 3.09
PRMT1-220ENST00000534676 CHD1O14646 1710 aa34.35■■■■□ 3.09
PRMT1-220ENST00000534676 ARHGEF11O15085 1522 aa34.29■■■■□ 3.08
PRMT1-220ENST00000534676 SNAPC4Q5SXM2 1469 aa34.21■■■■□ 3.07
PRMT1-220ENST00000534676 FBLN2P98095 1184 aa34.19■■■■□ 3.06
PRMT1-220ENST00000534676 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
PRMT1-220ENST00000534676 MAGI1Q96QZ7 1491 aaPredicted RBP34.15■■■■□ 3.06
PRMT1-220ENST00000534676 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
PRMT1-220ENST00000534676 GAPVD1Q14C86 1478 aa34.07■■■■□ 3.04
PRMT1-220ENST00000534676 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
PRMT1-220ENST00000534676 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
PRMT1-220ENST00000534676 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
PRMT1-220ENST00000534676 CLASP1Q7Z460 1538 aa34.03■■■■□ 3.04
PRMT1-220ENST00000534676 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
PRMT1-220ENST00000534676 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
PRMT1-220ENST00000534676 TOP2BQ02880 1626 aa33.99■■■■□ 3.03
PRMT1-220ENST00000534676 CYB5RLQ6IPT4 315 aa33.98■■■■□ 3.03
PRMT1-220ENST00000534676 ARAP1Q96P48 1450 aa33.98■■■■□ 3.03
PRMT1-220ENST00000534676 WRNQ14191 1432 aaPredicted RBP eCLIP33.97■■■■□ 3.03
PRMT1-220ENST00000534676 SYNJ1O43426 1573 aa33.96■■■■□ 3.03
PRMT1-220ENST00000534676 ADAMTS12P58397 1594 aa33.74■■■□□ 2.99
PRMT1-220ENST00000534676 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
PRMT1-220ENST00000534676 ERICH3Q5RHP9 1530 aa33.68■■■□□ 2.98
PRMT1-220ENST00000534676 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
PRMT1-220ENST00000534676 NUP160Q12769 1436 aa33.65■■■□□ 2.98
PRMT1-220ENST00000534676 CEP170Q5SW79 1584 aa33.61■■■□□ 2.97
PRMT1-220ENST00000534676 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.95
PRMT1-220ENST00000534676 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
PRMT1-220ENST00000534676 TRHP20396 242 aaPredicted RBP33.45■■■□□ 2.95
PRMT1-220ENST00000534676 IGF1RP08069 1367 aa33.33■■■□□ 2.93
PRMT1-220ENST00000534676 KIF27Q86VH2 1401 aa33.29■■■□□ 2.92
PRMT1-220ENST00000534676 RUSC2Q8N2Y8 1516 aa33.27■■■□□ 2.92
PRMT1-220ENST00000534676 JPH4Q96JJ6 628 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms