RNA–Protein interactions for RNA: ENST00000531013.1

SLC39A4-207, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2

Gene SLC39A4, Length 795 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-207ENST00000531013 NISCHQ9Y2I1 1504 aa45.98■■■■■ 4.95
SLC39A4-207ENST00000531013 CCDC180Q9P1Z9 1646 aa40.78■■■■■ 4.12
SLC39A4-207ENST00000531013 ABCC9O60706 1549 aa39.99■■■■□ 3.99
SLC39A4-207ENST00000531013 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.76
SLC39A4-207ENST00000531013 RB1CC1Q8TDY2 1594 aa38.42■■■■□ 3.74
SLC39A4-207ENST00000531013 NACADO15069 1562 aa38.39■■■■□ 3.74
SLC39A4-207ENST00000531013 ZCCHC6Q5VYS8 1495 aaKnown RBP38.28■■■■□ 3.72
SLC39A4-207ENST00000531013 MYO15BQ96JP2 1530 aa38.14■■■■□ 3.7
SLC39A4-207ENST00000531013 DCAF1Q9Y4B6 1507 aa38■■■■□ 3.67
SLC39A4-207ENST00000531013 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
SLC39A4-207ENST00000531013 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
SLC39A4-207ENST00000531013 SCRIBQ14160 1630 aa37.28■■■■□ 3.56
SLC39A4-207ENST00000531013 BICRAQ9NZM4 1560 aa37.25■■■■□ 3.55
SLC39A4-207ENST00000531013 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.48
SLC39A4-207ENST00000531013 DNAJC5BQ9UF47 199 aa36.73■■■■□ 3.47
SLC39A4-207ENST00000531013 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
SLC39A4-207ENST00000531013 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
SLC39A4-207ENST00000531013 CECR2Q9BXF3 1484 aa35.92■■■■□ 3.34
SLC39A4-207ENST00000531013 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
SLC39A4-207ENST00000531013 BAZ1AQ9NRL2 1556 aaPredicted RBP35.62■■■■□ 3.29
SLC39A4-207ENST00000531013 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
SLC39A4-207ENST00000531013 MROH2BQ7Z745 1585 aa35.46■■■■□ 3.27
SLC39A4-207ENST00000531013 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
SLC39A4-207ENST00000531013 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
SLC39A4-207ENST00000531013 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
SLC39A4-207ENST00000531013 HMGXB3Q12766 1538 aa35.22■■■■□ 3.23
SLC39A4-207ENST00000531013 BAZ1BQ9UIG0 1483 aaKnown RBP35.18■■■■□ 3.22
SLC39A4-207ENST00000531013 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.21
SLC39A4-207ENST00000531013 WIZO95785 1651 aa35.05■■■■□ 3.2
SLC39A4-207ENST00000531013 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
SLC39A4-207ENST00000531013 NESP48681 1621 aa34.61■■■■□ 3.13
SLC39A4-207ENST00000531013 LAMC3Q9Y6N6 1575 aa34.47■■■■□ 3.11
SLC39A4-207ENST00000531013 ERCC6Q03468 1493 aa34.46■■■■□ 3.11
SLC39A4-207ENST00000531013 CADPSQ9ULU8 1353 aa34.45■■■■□ 3.11
SLC39A4-207ENST00000531013 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
SLC39A4-207ENST00000531013 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
SLC39A4-207ENST00000531013 PDS5BQ9NTI5 1447 aa34.3■■■■□ 3.08
SLC39A4-207ENST00000531013 CFTRP13569 1480 aa34.22■■■■□ 3.07
SLC39A4-207ENST00000531013 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
SLC39A4-207ENST00000531013 CUX2O14529 1486 aa34.04■■■■□ 3.04
SLC39A4-207ENST00000531013 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
SLC39A4-207ENST00000531013 THOC2Q8NI27 1593 aaKnown RBP33.99■■■■□ 3.03
SLC39A4-207ENST00000531013 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
SLC39A4-207ENST00000531013 MRC2Q9UBG0 1479 aa33.92■■■■□ 3.02
SLC39A4-207ENST00000531013 PRDM2Q13029 1718 aa33.86■■■■□ 3.01
SLC39A4-207ENST00000531013 WDR62O43379 1518 aa33.77■■■■□ 3
SLC39A4-207ENST00000531013 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
SLC39A4-207ENST00000531013 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
SLC39A4-207ENST00000531013 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
SLC39A4-207ENST00000531013 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
SLC39A4-207ENST00000531013 IFT140Q96RY7 1462 aa33.27■■■□□ 2.92
SLC39A4-207ENST00000531013 CUX1P39880 1505 aa33.25■■■□□ 2.91
SLC39A4-207ENST00000531013 POLA1P09884 1462 aaPredicted RBP33.2■■■□□ 2.91
SLC39A4-207ENST00000531013 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
SLC39A4-207ENST00000531013 ZNF608Q9ULD9 1512 aaPredicted RBP33.13■■■□□ 2.89
SLC39A4-207ENST00000531013 SOGA1O94964 1423 aa33.12■■■□□ 2.89
SLC39A4-207ENST00000531013 RAD54L2Q9Y4B4 1467 aa33.1■■■□□ 2.89
SLC39A4-207ENST00000531013 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
SLC39A4-207ENST00000531013 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
SLC39A4-207ENST00000531013 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
SLC39A4-207ENST00000531013 AQRO60306 1485 aaKnown RBP eCLIP32.98■■■□□ 2.872e-8■■■■■ 28.7
SLC39A4-207ENST00000531013 SYNJ1O43426 1573 aa32.95■■■□□ 2.86
SLC39A4-207ENST00000531013 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.86
SLC39A4-207ENST00000531013 EIF4G3O43432 1585 aaKnown RBP32.94■■■□□ 2.86
SLC39A4-207ENST00000531013 TOP2BQ02880 1626 aa32.94■■■□□ 2.86
SLC39A4-207ENST00000531013 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
SLC39A4-207ENST00000531013 ABCA10Q8WWZ4 1543 aa32.81■■■□□ 2.84
SLC39A4-207ENST00000531013 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
SLC39A4-207ENST00000531013 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
SLC39A4-207ENST00000531013 GAPVD1Q14C86 1478 aa32.71■■■□□ 2.83
SLC39A4-207ENST00000531013 GRIN2BQ13224 1484 aa32.69■■■□□ 2.82
SLC39A4-207ENST00000531013 FBLN2P98095 1184 aa32.64■■■□□ 2.82
SLC39A4-207ENST00000531013 SNAPC4Q5SXM2 1469 aa32.64■■■□□ 2.82
SLC39A4-207ENST00000531013 ABCA5Q8WWZ7 1642 aa32.62■■■□□ 2.81
SLC39A4-207ENST00000531013 MAGI1Q96QZ7 1491 aaPredicted RBP32.57■■■□□ 2.8
SLC39A4-207ENST00000531013 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
SLC39A4-207ENST00000531013 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
SLC39A4-207ENST00000531013 CHD1O14646 1710 aa32.51■■■□□ 2.8
SLC39A4-207ENST00000531013 SYNJ2O15056 1496 aa32.46■■■□□ 2.79
SLC39A4-207ENST00000531013 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
SLC39A4-207ENST00000531013 ERICH3Q5RHP9 1530 aa32.4■■■□□ 2.78
SLC39A4-207ENST00000531013 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
SLC39A4-207ENST00000531013 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
SLC39A4-207ENST00000531013 ADAMTS12P58397 1594 aa32.32■■■□□ 2.77
SLC39A4-207ENST00000531013 IGF1RP08069 1367 aa32.28■■■□□ 2.76
SLC39A4-207ENST00000531013 GRIN2AQ12879 1464 aa32.25■■■□□ 2.75
SLC39A4-207ENST00000531013 CLASP1Q7Z460 1538 aa32.17■■■□□ 2.74
SLC39A4-207ENST00000531013 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
SLC39A4-207ENST00000531013 ARHGEF11O15085 1522 aa32.12■■■□□ 2.73
SLC39A4-207ENST00000531013 NUP160Q12769 1436 aa32.11■■■□□ 2.73
SLC39A4-207ENST00000531013 RIMBP3CA6NJZ7 1639 aa32.11■■■□□ 2.73
SLC39A4-207ENST00000531013 RIMBP3BA6NNM3 1639 aa32.11■■■□□ 2.73
SLC39A4-207ENST00000531013 RIMBP3Q9UFD9 1639 aa32.11■■■□□ 2.73
SLC39A4-207ENST00000531013 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
SLC39A4-207ENST00000531013 CUL7Q14999 1698 aa32.08■■■□□ 2.73
SLC39A4-207ENST00000531013 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
SLC39A4-207ENST00000531013 CHIC1Q5VXU3 224 aa32.03■■■□□ 2.72
SLC39A4-207ENST00000531013 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
SLC39A4-207ENST00000531013 JPH4Q96JJ6 628 aa31.88■■■□□ 2.69
SLC39A4-207ENST00000531013 ARAP1Q96P48 1450 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms