Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.452e-6■■□□□ 12.6
NCBP2P52298 CPSF7-207ENST00000449811 567 ntTSL 412.09□□□□□ -0.472e-6■■□□□ 12.6
NCBP2P52298 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.482e-6■■□□□ 12.6
NCBP2P52298 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.06□□□□□ -0.482e-6■■□□□ 12.6
NCBP2P52298 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC12.04□□□□□ -0.482e-6■■□□□ 12.6
NCBP2P52298 CYBA-209ENST00000568278 439 ntTSL 512.02□□□□□ -0.491e-6■■□□□ 12.6
NCBP2P52298 SPON2-210ENST00000506266 462 ntTSL 411.99□□□□□ -0.492e-6■■□□□ 12.6
NCBP2P52298 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.52e-6■■□□□ 12.6
NCBP2P52298 SPON2-221ENST00000515553 234 ntTSL 311.91□□□□□ -0.52e-6■■□□□ 12.6
NCBP2P52298 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.88□□□□□ -0.512e-6■■□□□ 12.6
NCBP2P52298 IDI1-204ENST00000482091 1029 ntTSL 511.84□□□□□ -0.512e-6■■□□□ 12.6
NCBP2P52298 PKMYT1-209ENST00000572658 551 ntTSL 211.68□□□□□ -0.542e-6■■□□□ 12.6
NCBP2P52298 HMGCR-208ENST00000509431 421 ntTSL 211.65□□□□□ -0.542e-6■■□□□ 12.6
NCBP2P52298 CPSF7-218ENST00000537641 1728 ntTSL 511.38□□□□□ -0.592e-6■■□□□ 12.6
NCBP2P52298 PTPRF-208ENST00000437607 788 ntTSL 1 (best)11.29□□□□□ -0.62e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.623e-11■■□□□ 12.6
NCBP2P52298 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.632e-6■■□□□ 12.6
NCBP2P52298 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.92□□□□□ -0.662e-6■■□□□ 12.6
NCBP2P52298 DPCD-201ENST00000370147 641 ntTSL 2 BASIC10.85□□□□□ -0.672e-6■■□□□ 12.6
NCBP2P52298 PAAF1-210ENST00000541951 1383 ntTSL 2 BASIC10.85□□□□□ -0.672e-6■■□□□ 12.6
NCBP2P52298 CDK19-205ENST00000460913 448 ntTSL 510.82□□□□□ -0.682e-6■■□□□ 12.6
NCBP2P52298 CPSF7-211ENST00000477890 1234 ntTSL 510.59□□□□□ -0.712e-6■■□□□ 12.6
NCBP2P52298 PTBP1-211ENST00000587094 273 ntTSL 310.46□□□□□ -0.732e-6■■□□□ 12.6
NCBP2P52298 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC10.45□□□□□ -0.742e-6■■□□□ 12.6
NCBP2P52298 EPM2A-217ENST00000639423 2886 ntTSL 1 (best) BASIC10.44□□□□□ -0.742e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-207ENST00000546636 2125 ntTSL 1 (best)10.28□□□□□ -0.762e-6■■□□□ 12.6
NCBP2P52298 CPSF7-212ENST00000489728 488 ntTSL 410.26□□□□□ -0.772e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-232ENST00000514755 593 ntTSL 410.13□□□□□ -0.793e-11■■□□□ 12.6
NCBP2P52298 SMG1P3-205ENST00000522480 4262 ntBASIC10.09□□□□□ -0.792e-6■■□□□ 12.6
NCBP2P52298 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.822e-6■■□□□ 12.6
NCBP2P52298 DPCD-206ENST00000626968 541 ntTSL 5 BASIC9.62□□□□□ -0.872e-6■■□□□ 12.6
NCBP2P52298 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.92e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.93e-11■■□□□ 12.6
NCBP2P52298 ACYP1-202ENST00000357971 650 ntTSL 3 BASIC9.23□□□□□ -0.932e-6■■□□□ 12.6
NCBP2P52298 ACYP1-203ENST00000553302 606 ntTSL 2 BASIC9.23□□□□□ -0.932e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-227ENST00000508818 584 ntTSL 29.19□□□□□ -0.943e-11■■□□□ 12.6
NCBP2P52298 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC9.13□□□□□ -0.953e-11■■□□□ 12.6
NCBP2P52298 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC9.11□□□□□ -0.952e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.022e-6■■□□□ 12.6
NCBP2P52298 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.59□□□□□ -1.032e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-223ENST00000508249 604 ntTSL 48.42□□□□□ -1.063e-11■■□□□ 12.6
NCBP2P52298 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC8.36□□□□□ -1.072e-6■■□□□ 12.6
NCBP2P52298 CHFR-220ENST00000541817 758 ntTSL 58.31□□□□□ -1.082e-6■■□□□ 12.6
NCBP2P52298 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.082e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-213ENST00000547732 546 ntTSL 48.21□□□□□ -1.12e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.12e-6■■□□□ 12.6
NCBP2P52298 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.14□□□□□ -1.112e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.123e-11■■□□□ 12.6
NCBP2P52298 CPSF7-217ENST00000537162 801 ntTSL 37.86□□□□□ -1.152e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-206ENST00000546488 569 ntTSL 47.81□□□□□ -1.162e-6■■□□□ 12.6
NCBP2P52298 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.71□□□□□ -1.182e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.222e-6■■□□□ 12.6
NCBP2P52298 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.46□□□□□ -1.222e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-222ENST00000508238 547 ntTSL 47.23□□□□□ -1.253e-11■■□□□ 12.6
NCBP2P52298 CPSF7-216ENST00000536548 598 ntTSL 47.18□□□□□ -1.262e-6■■□□□ 12.6
NCBP2P52298 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.323e-11■■□□□ 12.6
NCBP2P52298 LARP1B-209ENST00000508819 1891 ntTSL 56.75□□□□□ -1.332e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.332e-6■■□□□ 12.6
NCBP2P52298 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.67□□□□□ -1.342e-6■■□□□ 12.6
NCBP2P52298 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.352e-6■■□□□ 12.6
NCBP2P52298 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.382e-6■■□□□ 12.6
NCBP2P52298 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.4□□□□□ -1.382e-6■■□□□ 12.6
NCBP2P52298 CPSF7-203ENST00000413184 571 ntTSL 46.34□□□□□ -1.392e-6■■□□□ 12.6
NCBP2P52298 CPSF7-214ENST00000535222 940 ntTSL 36.12□□□□□ -1.432e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-215ENST00000548193 576 ntTSL 35.58□□□□□ -1.522e-6■■□□□ 12.6
NCBP2P52298 CPSF7-210ENST00000474684 635 ntTSL 35.35□□□□□ -1.552e-6■■□□□ 12.6
NCBP2P52298 CPSF7-222ENST00000544585 722 ntTSL 25.2□□□□□ -1.582e-6■■□□□ 12.6
NCBP2P52298 CPSF7-219ENST00000539952 953 ntTSL 55.2□□□□□ -1.582e-6■■□□□ 12.6
NCBP2P52298 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.86□□□□□ -1.632e-6■■□□□ 12.6
NCBP2P52298 SLC11A2-224ENST00000550995 551 ntTSL 44.37□□□□□ -1.712e-6■■□□□ 12.6
NCBP2P52298 EPM2A-228ENST00000640898 322 ntTSL 43.08□□□□□ -1.922e-6■■□□□ 12.6
NCBP2P52298 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.7■□□□□ 0.585e-14■■□□□ 12.6
NCBP2P52298 SNHG6-205ENST00000521399 302 ntTSL 218.28■□□□□ 0.525e-14■■□□□ 12.6
NCBP2P52298 SNHG6-204ENST00000521127 560 ntTSL 216.61■□□□□ 0.255e-14■■□□□ 12.6
NCBP2P52298 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.12■□□□□ 0.015e-14■■□□□ 12.6
NCBP2P52298 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.92□□□□□ -2.15e-14■■□□□ 12.6
NCBP2P52298 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.847e-7■■□□□ 12.6
NCBP2P52298 CHMP7-205ENST00000519503 917 ntTSL 219.71■□□□□ 0.753e-6■■□□□ 12.6
NCBP2P52298 CHMP7-207ENST00000519984 666 ntTSL 319.33■□□□□ 0.683e-6■■□□□ 12.6
NCBP2P52298 CHMP7-206ENST00000519529 690 ntTSL 318.3■□□□□ 0.523e-6■■□□□ 12.6
NCBP2P52298 CHMP7-204ENST00000519414 914 ntTSL 317.29■□□□□ 0.363e-6■■□□□ 12.6
NCBP2P52298 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.313e-6■■□□□ 12.6
NCBP2P52298 PEX14-202ENST00000472851 805 ntTSL 316.48■□□□□ 0.233e-6■■□□□ 12.6
NCBP2P52298 CHMP7-203ENST00000517325 2639 ntTSL 215.79■□□□□ 0.123e-6■■□□□ 12.6
NCBP2P52298 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.353e-6■■□□□ 12.6
NCBP2P52298 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.363e-6■■□□□ 12.6
NCBP2P52298 PEX14-203ENST00000491661 637 ntTSL 28.32□□□□□ -1.083e-6■■□□□ 12.6
NCBP2P52298 MATR3-231ENST00000502394 589 ntTSL 411.39□□□□□ -0.596e-9■■□□□ 12.6
NCBP2P52298 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.471e-11■■□□□ 12.6
NCBP2P52298 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.43e-6■■□□□ 12.6
NCBP2P52298 GPS2-208ENST00000572172 1534 ntTSL 523.56■■□□□ 1.363e-6■■□□□ 12.6
NCBP2P52298 GPR75-ASB3-202ENST00000459916 556 ntTSL 422■■□□□ 1.111e-11■■□□□ 12.6
NCBP2P52298 GPR75-ASB3-203ENST00000498475 736 ntTSL 522■■□□□ 1.111e-11■■□□□ 12.6
NCBP2P52298 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.84■■□□□ 1.097e-9■■□□□ 12.6
NCBP2P52298 GPS2-205ENST00000571569 1586 ntTSL 1 (best)21.17■□□□□ 0.983e-6■■□□□ 12.6
NCBP2P52298 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.08■□□□□ 0.653e-6■■□□□ 12.6
NCBP2P52298 GPS2-204ENST00000571098 1045 ntTSL 219.05■□□□□ 0.643e-6■■□□□ 12.6
NCBP2P52298 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.633e-6■■□□□ 12.6
NCBP2P52298 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.7■□□□□ 0.583e-6■■□□□ 12.6
Retrieved 100 of 18,329 protein–RNA pairs in 182.7 ms