RNA–Protein interactions for RNA: ENST00000519984.1

CHMP7-207, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 666 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-207ENST00000519984 NISCHQ9Y2I1 1504 aa51.88■■■■■ 5.9
CHMP7-207ENST00000519984 CCDC180Q9P1Z9 1646 aa46.21■■■■■ 4.99
CHMP7-207ENST00000519984 ABCC9O60706 1549 aa45.59■■■■■ 4.89
CHMP7-207ENST00000519984 RB1CC1Q8TDY2 1594 aa43.62■■■■■ 4.57
CHMP7-207ENST00000519984 NACADO15069 1562 aa43.49■■■■■ 4.55
CHMP7-207ENST00000519984 DCAF8L2P0C7V8 631 aa43.47■■■■■ 4.55
CHMP7-207ENST00000519984 ZCCHC6Q5VYS8 1495 aaKnown RBP43.17■■■■■ 4.5
CHMP7-207ENST00000519984 MYO15BQ96JP2 1530 aa43.1■■■■■ 4.49
CHMP7-207ENST00000519984 DCAF1Q9Y4B6 1507 aa42.83■■■■■ 4.45
CHMP7-207ENST00000519984 UNC13AQ9UPW8 1703 aa42.76■■■■■ 4.44
CHMP7-207ENST00000519984 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
CHMP7-207ENST00000519984 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.38
CHMP7-207ENST00000519984 SCRIBQ14160 1630 aa42.25■■■■■ 4.35
CHMP7-207ENST00000519984 DNAJC5BQ9UF47 199 aa42.17■■■■■ 4.34
CHMP7-207ENST00000519984 SHROOM4Q9ULL8 1493 aa41.76■■■■■ 4.28
CHMP7-207ENST00000519984 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
CHMP7-207ENST00000519984 CC2D2AQ9P2K1 1620 aa41.21■■■■■ 4.19
CHMP7-207ENST00000519984 CECR2Q9BXF3 1484 aa40.95■■■■■ 4.15
CHMP7-207ENST00000519984 SMARCA4P51532 1647 aa40.34■■■■■ 4.05
CHMP7-207ENST00000519984 BAZ1AQ9NRL2 1556 aaPredicted RBP40.19■■■■■ 4.02
CHMP7-207ENST00000519984 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
CHMP7-207ENST00000519984 NCAPD3P42695 1498 aa40.15■■■■■ 4.02
CHMP7-207ENST00000519984 SMARCA2P51531 1590 aa40.05■■■■■ 4
CHMP7-207ENST00000519984 MROH2BQ7Z745 1585 aa40.05■■■■■ 4
CHMP7-207ENST00000519984 HMGXB3Q12766 1538 aa39.94■■■■□ 3.98
CHMP7-207ENST00000519984 PEG3Q9GZU2 1588 aa39.9■■■■□ 3.98
CHMP7-207ENST00000519984 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
CHMP7-207ENST00000519984 WIZO95785 1651 aa39.61■■■■□ 3.93
CHMP7-207ENST00000519984 RSF1Q96T23 1441 aaPredicted RBP39.45■■■■□ 3.91
CHMP7-207ENST00000519984 NESP48681 1621 aa39.42■■■■□ 3.9
CHMP7-207ENST00000519984 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
CHMP7-207ENST00000519984 LAMC3Q9Y6N6 1575 aa39.12■■■■□ 3.85
CHMP7-207ENST00000519984 TOP2AP11388 1531 aaKnown RBP39.1■■■■□ 3.85
CHMP7-207ENST00000519984 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
CHMP7-207ENST00000519984 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
CHMP7-207ENST00000519984 CUX2O14529 1486 aa38.89■■■■□ 3.82
CHMP7-207ENST00000519984 PDS5BQ9NTI5 1447 aa38.84■■■■□ 3.81
CHMP7-207ENST00000519984 THOC2Q8NI27 1593 aaKnown RBP38.83■■■■□ 3.81
CHMP7-207ENST00000519984 CFTRP13569 1480 aa38.7■■■■□ 3.79
CHMP7-207ENST00000519984 CCDC88BA6NC98 1476 aa38.66■■■■□ 3.78
CHMP7-207ENST00000519984 FANCD2Q9BXW9 1451 aa38.56■■■■□ 3.76
CHMP7-207ENST00000519984 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
CHMP7-207ENST00000519984 CEP164Q9UPV0 1460 aa38.52■■■■□ 3.76
CHMP7-207ENST00000519984 WDR62O43379 1518 aa38.43■■■■□ 3.74
CHMP7-207ENST00000519984 PRDM2Q13029 1718 aa38.38■■■■□ 3.74
CHMP7-207ENST00000519984 URB2Q14146 1524 aaKnown RBP38.24■■■■□ 3.71
CHMP7-207ENST00000519984 SUPT5HO00267 1087 aaKnown RBP38.24■■■■□ 3.71
CHMP7-207ENST00000519984 DNAJC5Q9H3Z4 198 aa38.07■■■■□ 3.68
CHMP7-207ENST00000519984 TOPBP1Q92547 1522 aa37.92■■■■□ 3.66
CHMP7-207ENST00000519984 DNMBPQ6XZF7 1577 aa37.84■■■■□ 3.65
CHMP7-207ENST00000519984 ABCC8Q09428 1581 aa37.76■■■■□ 3.64
CHMP7-207ENST00000519984 IFT140Q96RY7 1462 aa37.7■■■■□ 3.63
CHMP7-207ENST00000519984 ZNF608Q9ULD9 1512 aaPredicted RBP37.67■■■■□ 3.62
CHMP7-207ENST00000519984 POLA1P09884 1462 aaPredicted RBP37.59■■■■□ 3.61
CHMP7-207ENST00000519984 CUX1P39880 1505 aa37.57■■■■□ 3.61
CHMP7-207ENST00000519984 TARBP1Q13395 1621 aaKnown RBP37.55■■■■□ 3.6
CHMP7-207ENST00000519984 EIF4G3O43432 1585 aaKnown RBP37.48■■■■□ 3.59
CHMP7-207ENST00000519984 RAD54L2Q9Y4B4 1467 aa37.48■■■■□ 3.59
CHMP7-207ENST00000519984 FGD5Q6ZNL6 1462 aa37.47■■■■□ 3.59
CHMP7-207ENST00000519984 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.584e-6■■□□□ 13.6
CHMP7-207ENST00000519984 SOGA1O94964 1423 aa37.39■■■■□ 3.58
CHMP7-207ENST00000519984 TDRD9Q8NDG6 1382 aaKnown RBP37.28■■■■□ 3.56
CHMP7-207ENST00000519984 OSCARQ8IYS5 282 aa37.22■■■■□ 3.55
CHMP7-207ENST00000519984 WDR97A6NE52 1622 aa37.19■■■■□ 3.54
CHMP7-207ENST00000519984 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
CHMP7-207ENST00000519984 WRNQ14191 1432 aaPredicted RBP eCLIP37.17■■■■□ 3.54
CHMP7-207ENST00000519984 TOP2BQ02880 1626 aa37.13■■■■□ 3.53
CHMP7-207ENST00000519984 BIVM-ERCC5R4GMW8 1640 aa37.13■■■■□ 3.53
CHMP7-207ENST00000519984 CHD1O14646 1710 aa37.08■■■■□ 3.53
CHMP7-207ENST00000519984 ABCA10Q8WWZ4 1543 aa37.05■■■■□ 3.52
CHMP7-207ENST00000519984 SNAPC4Q5SXM2 1469 aa37.03■■■■□ 3.52
CHMP7-207ENST00000519984 ABCA5Q8WWZ7 1642 aa36.97■■■■□ 3.51
CHMP7-207ENST00000519984 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
CHMP7-207ENST00000519984 GAPVD1Q14C86 1478 aa36.96■■■■□ 3.51
CHMP7-207ENST00000519984 FBLN2P98095 1184 aa36.95■■■■□ 3.51
CHMP7-207ENST00000519984 PBRM1Q86U86 1689 aa36.95■■■■□ 3.51
CHMP7-207ENST00000519984 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
CHMP7-207ENST00000519984 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
CHMP7-207ENST00000519984 RIMBP3CA6NJZ7 1639 aa36.77■■■■□ 3.48
CHMP7-207ENST00000519984 RIMBP3BA6NNM3 1639 aa36.77■■■■□ 3.48
CHMP7-207ENST00000519984 RIMBP3Q9UFD9 1639 aa36.77■■■■□ 3.48
CHMP7-207ENST00000519984 CHMP7Q8WUX9 453 aaPredicted RBP36.76■■■■□ 3.48
CHMP7-207ENST00000519984 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
CHMP7-207ENST00000519984 ARHGEF11O15085 1522 aa36.71■■■■□ 3.47
CHMP7-207ENST00000519984 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
CHMP7-207ENST00000519984 ADAMTS12P58397 1594 aa36.64■■■■□ 3.46
CHMP7-207ENST00000519984 ERICH3Q5RHP9 1530 aa36.57■■■■□ 3.44
CHMP7-207ENST00000519984 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
CHMP7-207ENST00000519984 FHAD1B1AJZ9 1412 aa36.5■■■■□ 3.43
CHMP7-207ENST00000519984 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
CHMP7-207ENST00000519984 CEP170Q5SW79 1584 aa36.42■■■■□ 3.42
CHMP7-207ENST00000519984 NUP160Q12769 1436 aa36.38■■■■□ 3.41
CHMP7-207ENST00000519984 KIF27Q86VH2 1401 aa36.36■■■■□ 3.41
CHMP7-207ENST00000519984 CYB5RLQ6IPT4 315 aa36.36■■■■□ 3.41
CHMP7-207ENST00000519984 IGF1RP08069 1367 aa36.3■■■■□ 3.4
CHMP7-207ENST00000519984 ERCC6L2Q5T890 1561 aa36.21■■■■□ 3.39
CHMP7-207ENST00000519984 CUL7Q14999 1698 aa36.19■■■■□ 3.38
CHMP7-207ENST00000519984 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
CHMP7-207ENST00000519984 RUSC2Q8N2Y8 1516 aa36.12■■■■□ 3.37
CHMP7-207ENST00000519984 CARMIL1Q5VZK9 1371 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms