RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
SNHG6-202ENST00000520619 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
SNHG6-202ENST00000520619 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
SNHG6-202ENST00000520619 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
SNHG6-202ENST00000520619 FOXD1Q16676 465 aa17.69■□□□□ 0.42
SNHG6-202ENST00000520619 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
SNHG6-202ENST00000520619 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
SNHG6-202ENST00000520619 ADRA2BP18089 450 aa16.94■□□□□ 0.3
SNHG6-202ENST00000520619 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
SNHG6-202ENST00000520619 MSH5O43196 834 aa16.33■□□□□ 0.2
SNHG6-202ENST00000520619 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
SNHG6-202ENST00000520619 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
SNHG6-202ENST00000520619 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
SNHG6-202ENST00000520619 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
SNHG6-202ENST00000520619 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SNHG6-202ENST00000520619 KCNA4P22459 653 aa15.15■□□□□ 0.02
SNHG6-202ENST00000520619 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
SNHG6-202ENST00000520619 POTEDQ86YR6 584 aa15□□□□□ -0.01
SNHG6-202ENST00000520619 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
SNHG6-202ENST00000520619 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
SNHG6-202ENST00000520619 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
SNHG6-202ENST00000520619 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
SNHG6-202ENST00000520619 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
SNHG6-202ENST00000520619 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
SNHG6-202ENST00000520619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.158e-25■□□□□ 9.7
SNHG6-202ENST00000520619 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
SNHG6-202ENST00000520619 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
SNHG6-202ENST00000520619 ZBTB22O15209 634 aa13.95□□□□□ -0.18
SNHG6-202ENST00000520619 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
SNHG6-202ENST00000520619 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
SNHG6-202ENST00000520619 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
SNHG6-202ENST00000520619 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
SNHG6-202ENST00000520619 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
SNHG6-202ENST00000520619 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
SNHG6-202ENST00000520619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
SNHG6-202ENST00000520619 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
SNHG6-202ENST00000520619 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
SNHG6-202ENST00000520619 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
SNHG6-202ENST00000520619 APLP2Q06481 763 aa13.55□□□□□ -0.24
SNHG6-202ENST00000520619 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
SNHG6-202ENST00000520619 CAPN15O75808 1086 aa13.48□□□□□ -0.25
SNHG6-202ENST00000520619 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
SNHG6-202ENST00000520619 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
SNHG6-202ENST00000520619 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
SNHG6-202ENST00000520619 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
SNHG6-202ENST00000520619 DSG3P32926 999 aa13.29□□□□□ -0.28
SNHG6-202ENST00000520619 ABCB7O75027 752 aa13.24□□□□□ -0.29
SNHG6-202ENST00000520619 POLA2Q14181 598 aa13.18□□□□□ -0.3
SNHG6-202ENST00000520619 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
SNHG6-202ENST00000520619 FBLN2P98095 1184 aa12.87□□□□□ -0.35
SNHG6-202ENST00000520619 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
SNHG6-202ENST00000520619 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
SNHG6-202ENST00000520619 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
SNHG6-202ENST00000520619 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
SNHG6-202ENST00000520619 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
SNHG6-202ENST00000520619 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
SNHG6-202ENST00000520619 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
SNHG6-202ENST00000520619 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
SNHG6-202ENST00000520619 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
SNHG6-202ENST00000520619 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
SNHG6-202ENST00000520619 FKBP8Q14318 412 aa12.47□□□□□ -0.41
SNHG6-202ENST00000520619 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
SNHG6-202ENST00000520619 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNHG6-202ENST00000520619 PROM2Q8N271 834 aa12.31□□□□□ -0.44
SNHG6-202ENST00000520619 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
SNHG6-202ENST00000520619 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
SNHG6-202ENST00000520619 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
SNHG6-202ENST00000520619 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
SNHG6-202ENST00000520619 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
SNHG6-202ENST00000520619 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
SNHG6-202ENST00000520619 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
SNHG6-202ENST00000520619 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNHG6-202ENST00000520619 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
SNHG6-202ENST00000520619 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SNHG6-202ENST00000520619 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
SNHG6-202ENST00000520619 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
SNHG6-202ENST00000520619 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
SNHG6-202ENST00000520619 MIER1Q8N108 512 aa11.88□□□□□ -0.51
SNHG6-202ENST00000520619 POTEHQ6S545 545 aa11.86□□□□□ -0.51
SNHG6-202ENST00000520619 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
SNHG6-202ENST00000520619 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
SNHG6-202ENST00000520619 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
SNHG6-202ENST00000520619 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
SNHG6-202ENST00000520619 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
SNHG6-202ENST00000520619 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
SNHG6-202ENST00000520619 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
SNHG6-202ENST00000520619 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNHG6-202ENST00000520619 HAX1O00165 279 aa11.62□□□□□ -0.55
SNHG6-202ENST00000520619 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
SNHG6-202ENST00000520619 NUBP1P53384 320 aa11.59□□□□□ -0.55
SNHG6-202ENST00000520619 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
SNHG6-202ENST00000520619 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
SNHG6-202ENST00000520619 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
SNHG6-202ENST00000520619 EVX2Q03828 476 aa11.54□□□□□ -0.56
SNHG6-202ENST00000520619 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
SNHG6-202ENST00000520619 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
SNHG6-202ENST00000520619 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
SNHG6-202ENST00000520619 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
SNHG6-202ENST00000520619 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
SNHG6-202ENST00000520619 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms