RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 NISCHQ9Y2I1 1504 aa48.47■■■■■ 5.35
CHMP7-204ENST00000519414 ABCC9O60706 1549 aa43.7■■■■■ 4.59
CHMP7-204ENST00000519414 CCDC180Q9P1Z9 1646 aa43.5■■■■■ 4.55
CHMP7-204ENST00000519414 RB1CC1Q8TDY2 1594 aa41.53■■■■■ 4.24
CHMP7-204ENST00000519414 NACADO15069 1562 aa41.22■■■■■ 4.19
CHMP7-204ENST00000519414 DNAJC5BQ9UF47 199 aa41.18■■■■■ 4.18
CHMP7-204ENST00000519414 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
CHMP7-204ENST00000519414 PABPN1Q86U42 306 aaKnown RBP eCLIP40.7■■■■■ 4.11
CHMP7-204ENST00000519414 MYO15BQ96JP2 1530 aa40.64■■■■■ 4.1
CHMP7-204ENST00000519414 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
CHMP7-204ENST00000519414 BICRAQ9NZM4 1560 aa40.3■■■■■ 4.04
CHMP7-204ENST00000519414 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
CHMP7-204ENST00000519414 DCAF1Q9Y4B6 1507 aa40.04■■■■■ 4
CHMP7-204ENST00000519414 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
CHMP7-204ENST00000519414 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
CHMP7-204ENST00000519414 CC2D2AQ9P2K1 1620 aa39.44■■■■□ 3.9
CHMP7-204ENST00000519414 CECR2Q9BXF3 1484 aa39.41■■■■□ 3.9
CHMP7-204ENST00000519414 EIF4G1Q04637 1599 aaKnown RBP39.33■■■■□ 3.89
CHMP7-204ENST00000519414 NCAPD3P42695 1498 aa38.09■■■■□ 3.69
CHMP7-204ENST00000519414 DNAJC5Q9H3Z4 198 aa37.97■■■■□ 3.67
CHMP7-204ENST00000519414 ATAD2BQ9ULI0 1458 aa37.93■■■■□ 3.66
CHMP7-204ENST00000519414 SMARCA2P51531 1590 aa37.8■■■■□ 3.64
CHMP7-204ENST00000519414 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
CHMP7-204ENST00000519414 CUX2O14529 1486 aa37.77■■■■□ 3.64
CHMP7-204ENST00000519414 ERCC6Q03468 1493 aa37.77■■■■□ 3.64
CHMP7-204ENST00000519414 HMGXB3Q12766 1538 aa37.76■■■■□ 3.63
CHMP7-204ENST00000519414 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.61
CHMP7-204ENST00000519414 BAZ1BQ9UIG0 1483 aaKnown RBP37.55■■■■□ 3.6
CHMP7-204ENST00000519414 NESP48681 1621 aa37.48■■■■□ 3.59
CHMP7-204ENST00000519414 PEG3Q9GZU2 1588 aa37.46■■■■□ 3.59
CHMP7-204ENST00000519414 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.56
CHMP7-204ENST00000519414 LAMC3Q9Y6N6 1575 aa37.21■■■■□ 3.55
CHMP7-204ENST00000519414 THOC2Q8NI27 1593 aaKnown RBP37.1■■■■□ 3.53
CHMP7-204ENST00000519414 PDS5BQ9NTI5 1447 aa37.06■■■■□ 3.52
CHMP7-204ENST00000519414 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
CHMP7-204ENST00000519414 KIF21AQ7Z4S6 1674 aa36.92■■■■□ 3.5
CHMP7-204ENST00000519414 WIZO95785 1651 aa36.82■■■■□ 3.48
CHMP7-204ENST00000519414 MRC2Q9UBG0 1479 aa36.71■■■■□ 3.47
CHMP7-204ENST00000519414 WDR62O43379 1518 aa36.61■■■■□ 3.45
CHMP7-204ENST00000519414 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
CHMP7-204ENST00000519414 CEP164Q9UPV0 1460 aa36.52■■■■□ 3.44
CHMP7-204ENST00000519414 FANCD2Q9BXW9 1451 aa36.48■■■■□ 3.43
CHMP7-204ENST00000519414 CFTRP13569 1480 aa36.47■■■■□ 3.43
CHMP7-204ENST00000519414 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
CHMP7-204ENST00000519414 TRIM41Q8WV44 630 aa36.2■■■■□ 3.39
CHMP7-204ENST00000519414 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
CHMP7-204ENST00000519414 OSCARQ8IYS5 282 aa36.07■■■■□ 3.36
CHMP7-204ENST00000519414 CCDC88BA6NC98 1476 aa36■■■■□ 3.35
CHMP7-204ENST00000519414 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
CHMP7-204ENST00000519414 IFT140Q96RY7 1462 aa35.83■■■■□ 3.33
CHMP7-204ENST00000519414 TOPBP1Q92547 1522 aa35.76■■■■□ 3.31
CHMP7-204ENST00000519414 ZNF608Q9ULD9 1512 aaPredicted RBP35.75■■■■□ 3.31
CHMP7-204ENST00000519414 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
CHMP7-204ENST00000519414 DNMBPQ6XZF7 1577 aa35.6■■■■□ 3.29
CHMP7-204ENST00000519414 EIF4G3O43432 1585 aaKnown RBP35.51■■■■□ 3.27
CHMP7-204ENST00000519414 RIMBP3CA6NJZ7 1639 aa35.5■■■■□ 3.27
CHMP7-204ENST00000519414 RIMBP3BA6NNM3 1639 aa35.5■■■■□ 3.27
CHMP7-204ENST00000519414 RIMBP3Q9UFD9 1639 aa35.5■■■■□ 3.27
CHMP7-204ENST00000519414 AQRO60306 1485 aaKnown RBP eCLIP35.43■■■■□ 3.264e-6■■□□□ 13.6
CHMP7-204ENST00000519414 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
CHMP7-204ENST00000519414 ARHGEF11O15085 1522 aa35.41■■■■□ 3.26
CHMP7-204ENST00000519414 POLA1P09884 1462 aaPredicted RBP35.39■■■■□ 3.26
CHMP7-204ENST00000519414 SOGA1O94964 1423 aa35.26■■■■□ 3.24
CHMP7-204ENST00000519414 FBLN2P98095 1184 aa35.26■■■■□ 3.24
CHMP7-204ENST00000519414 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.23
CHMP7-204ENST00000519414 CHD1O14646 1710 aa35.22■■■■□ 3.23
CHMP7-204ENST00000519414 CYB5RLQ6IPT4 315 aa35.21■■■■□ 3.23
CHMP7-204ENST00000519414 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
CHMP7-204ENST00000519414 FGD5Q6ZNL6 1462 aa35.14■■■■□ 3.22
CHMP7-204ENST00000519414 WDR97A6NE52 1622 aa35.08■■■■□ 3.21
CHMP7-204ENST00000519414 CUX1P39880 1505 aa35.06■■■■□ 3.2
CHMP7-204ENST00000519414 SNAPC4Q5SXM2 1469 aa35.04■■■■□ 3.2
CHMP7-204ENST00000519414 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
CHMP7-204ENST00000519414 CHMP7Q8WUX9 453 aaPredicted RBP35■■■■□ 3.19
CHMP7-204ENST00000519414 MAGI1Q96QZ7 1491 aaPredicted RBP34.97■■■■□ 3.19
CHMP7-204ENST00000519414 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
CHMP7-204ENST00000519414 CLASP1Q7Z460 1538 aa34.9■■■■□ 3.18
CHMP7-204ENST00000519414 SYNJ1O43426 1573 aa34.87■■■■□ 3.17
CHMP7-204ENST00000519414 TRHP20396 242 aaPredicted RBP34.87■■■■□ 3.17
CHMP7-204ENST00000519414 SYNJ2O15056 1496 aa34.86■■■■□ 3.17
CHMP7-204ENST00000519414 GAPVD1Q14C86 1478 aa34.81■■■■□ 3.16
CHMP7-204ENST00000519414 SUPT5HO00267 1087 aaKnown RBP34.8■■■■□ 3.16
CHMP7-204ENST00000519414 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.15
CHMP7-204ENST00000519414 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
CHMP7-204ENST00000519414 ABCA5Q8WWZ7 1642 aa34.66■■■■□ 3.14
CHMP7-204ENST00000519414 WRNQ14191 1432 aaPredicted RBP eCLIP34.61■■■■□ 3.13
CHMP7-204ENST00000519414 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
CHMP7-204ENST00000519414 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
CHMP7-204ENST00000519414 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
CHMP7-204ENST00000519414 ADAMTS12P58397 1594 aa34.41■■■■□ 3.1
CHMP7-204ENST00000519414 NUP160Q12769 1436 aa34.4■■■■□ 3.1
CHMP7-204ENST00000519414 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
CHMP7-204ENST00000519414 CEP170Q5SW79 1584 aa34.34■■■■□ 3.09
CHMP7-204ENST00000519414 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.08
CHMP7-204ENST00000519414 ERICH3Q5RHP9 1530 aa34.3■■■■□ 3.08
CHMP7-204ENST00000519414 SHROOM2Q13796 1616 aa34.22■■■■□ 3.07
CHMP7-204ENST00000519414 PRG4Q92954 1404 aaPredicted RBP34.09■■■■□ 3.05
CHMP7-204ENST00000519414 JPH4Q96JJ6 628 aa34.08■■■■□ 3.05
CHMP7-204ENST00000519414 AEBP2Q6ZN18 517 aaPredicted RBP33.98■■■■□ 3.03
CHMP7-204ENST00000519414 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms