RNA–Protein interactions for RNA: ENST00000522480.5

SMG1P3-205, Transcript of SMG1 pseudogene 3, humanhuman

BASIC

Gene SMG1P3, Length 4,262 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-205ENST00000522480 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
SMG1P3-205ENST00000522480 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
SMG1P3-205ENST00000522480 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
SMG1P3-205ENST00000522480 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
SMG1P3-205ENST00000522480 ABCC9O60706 1549 aa21.08■□□□□ 0.97
SMG1P3-205ENST00000522480 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
SMG1P3-205ENST00000522480 NACADO15069 1562 aa20.85■□□□□ 0.93
SMG1P3-205ENST00000522480 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
SMG1P3-205ENST00000522480 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
SMG1P3-205ENST00000522480 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
SMG1P3-205ENST00000522480 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
SMG1P3-205ENST00000522480 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
SMG1P3-205ENST00000522480 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
SMG1P3-205ENST00000522480 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMG1P3-205ENST00000522480 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
SMG1P3-205ENST00000522480 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
SMG1P3-205ENST00000522480 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
SMG1P3-205ENST00000522480 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
SMG1P3-205ENST00000522480 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
SMG1P3-205ENST00000522480 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
SMG1P3-205ENST00000522480 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
SMG1P3-205ENST00000522480 WIZO95785 1651 aa19.4■□□□□ 0.7
SMG1P3-205ENST00000522480 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
SMG1P3-205ENST00000522480 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
SMG1P3-205ENST00000522480 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
SMG1P3-205ENST00000522480 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
SMG1P3-205ENST00000522480 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
SMG1P3-205ENST00000522480 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
SMG1P3-205ENST00000522480 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
SMG1P3-205ENST00000522480 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
SMG1P3-205ENST00000522480 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
SMG1P3-205ENST00000522480 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
SMG1P3-205ENST00000522480 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
SMG1P3-205ENST00000522480 CFTRP13569 1480 aa18.67■□□□□ 0.58
SMG1P3-205ENST00000522480 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
SMG1P3-205ENST00000522480 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
SMG1P3-205ENST00000522480 NESP48681 1621 aa18.47■□□□□ 0.55
SMG1P3-205ENST00000522480 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
SMG1P3-205ENST00000522480 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
SMG1P3-205ENST00000522480 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
SMG1P3-205ENST00000522480 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
SMG1P3-205ENST00000522480 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
SMG1P3-205ENST00000522480 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
SMG1P3-205ENST00000522480 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
SMG1P3-205ENST00000522480 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
SMG1P3-205ENST00000522480 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
SMG1P3-205ENST00000522480 CUX1P39880 1505 aa18.31■□□□□ 0.52
SMG1P3-205ENST00000522480 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SMG1P3-205ENST00000522480 DNMBPQ6XZF7 1577 aa18.28■□□□□ 0.52
SMG1P3-205ENST00000522480 THOC2Q8NI27 1593 aaKnown RBP18.23■□□□□ 0.51
SMG1P3-205ENST00000522480 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
SMG1P3-205ENST00000522480 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
SMG1P3-205ENST00000522480 WDR62O43379 1518 aa18.19■□□□□ 0.5
SMG1P3-205ENST00000522480 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
SMG1P3-205ENST00000522480 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
SMG1P3-205ENST00000522480 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
SMG1P3-205ENST00000522480 FGD5Q6ZNL6 1462 aa18.11■□□□□ 0.49
SMG1P3-205ENST00000522480 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
SMG1P3-205ENST00000522480 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
SMG1P3-205ENST00000522480 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
SMG1P3-205ENST00000522480 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
SMG1P3-205ENST00000522480 EEA1Q15075 1411 aa18.01■□□□□ 0.47
SMG1P3-205ENST00000522480 CUX2O14529 1486 aa17.98■□□□□ 0.47
SMG1P3-205ENST00000522480 SOGA1O94964 1423 aa17.97■□□□□ 0.47
SMG1P3-205ENST00000522480 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
SMG1P3-205ENST00000522480 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
SMG1P3-205ENST00000522480 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
SMG1P3-205ENST00000522480 IFT140Q96RY7 1462 aa17.93■□□□□ 0.46
SMG1P3-205ENST00000522480 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
SMG1P3-205ENST00000522480 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
SMG1P3-205ENST00000522480 KIF21BO75037 1637 aa17.88■□□□□ 0.45
SMG1P3-205ENST00000522480 CUL7Q14999 1698 aa17.83■□□□□ 0.44
SMG1P3-205ENST00000522480 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.44
SMG1P3-205ENST00000522480 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
SMG1P3-205ENST00000522480 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
SMG1P3-205ENST00000522480 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
SMG1P3-205ENST00000522480 ZNF608Q9ULD9 1512 aaPredicted RBP17.76■□□□□ 0.43
SMG1P3-205ENST00000522480 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
SMG1P3-205ENST00000522480 IGF1RP08069 1367 aa17.75■□□□□ 0.43
SMG1P3-205ENST00000522480 ADAMTS12P58397 1594 aa17.72■□□□□ 0.43
SMG1P3-205ENST00000522480 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
SMG1P3-205ENST00000522480 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.42
SMG1P3-205ENST00000522480 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
SMG1P3-205ENST00000522480 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMG1P3-205ENST00000522480 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
SMG1P3-205ENST00000522480 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
SMG1P3-205ENST00000522480 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
SMG1P3-205ENST00000522480 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
SMG1P3-205ENST00000522480 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
SMG1P3-205ENST00000522480 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
SMG1P3-205ENST00000522480 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
SMG1P3-205ENST00000522480 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.4
SMG1P3-205ENST00000522480 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
SMG1P3-205ENST00000522480 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
SMG1P3-205ENST00000522480 CHD1O14646 1710 aa17.52■□□□□ 0.39
SMG1P3-205ENST00000522480 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
SMG1P3-205ENST00000522480 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
SMG1P3-205ENST00000522480 NUP160Q12769 1436 aa17.43■□□□□ 0.38
SMG1P3-205ENST00000522480 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
SMG1P3-205ENST00000522480 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms