RNA–Protein interactions for RNA: ENST00000541951.5

PAAF1-210, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2 BASIC

Gene PAAF1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-210ENST00000541951 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
PAAF1-210ENST00000541951 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
PAAF1-210ENST00000541951 ABCC9O60706 1549 aa22.6■■□□□ 1.21
PAAF1-210ENST00000541951 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
PAAF1-210ENST00000541951 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
PAAF1-210ENST00000541951 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
PAAF1-210ENST00000541951 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
PAAF1-210ENST00000541951 NACADO15069 1562 aa22.15■■□□□ 1.14
PAAF1-210ENST00000541951 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
PAAF1-210ENST00000541951 SCRIBQ14160 1630 aa21.64■■□□□ 1.06
PAAF1-210ENST00000541951 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
PAAF1-210ENST00000541951 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
PAAF1-210ENST00000541951 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
PAAF1-210ENST00000541951 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
PAAF1-210ENST00000541951 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
PAAF1-210ENST00000541951 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
PAAF1-210ENST00000541951 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
PAAF1-210ENST00000541951 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
PAAF1-210ENST00000541951 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
PAAF1-210ENST00000541951 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
PAAF1-210ENST00000541951 SUPT5HO00267 1087 aaKnown RBP20.56■□□□□ 0.88
PAAF1-210ENST00000541951 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
PAAF1-210ENST00000541951 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
PAAF1-210ENST00000541951 WIZO95785 1651 aa20.5■□□□□ 0.87
PAAF1-210ENST00000541951 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
PAAF1-210ENST00000541951 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
PAAF1-210ENST00000541951 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
PAAF1-210ENST00000541951 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
PAAF1-210ENST00000541951 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
PAAF1-210ENST00000541951 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PAAF1-210ENST00000541951 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
PAAF1-210ENST00000541951 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.8
PAAF1-210ENST00000541951 CFTRP13569 1480 aa19.83■□□□□ 0.77
PAAF1-210ENST00000541951 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
PAAF1-210ENST00000541951 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
PAAF1-210ENST00000541951 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
PAAF1-210ENST00000541951 NESP48681 1621 aa19.69■□□□□ 0.74
PAAF1-210ENST00000541951 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
PAAF1-210ENST00000541951 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
PAAF1-210ENST00000541951 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
PAAF1-210ENST00000541951 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
PAAF1-210ENST00000541951 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.71
PAAF1-210ENST00000541951 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
PAAF1-210ENST00000541951 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
PAAF1-210ENST00000541951 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
PAAF1-210ENST00000541951 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
PAAF1-210ENST00000541951 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
PAAF1-210ENST00000541951 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
PAAF1-210ENST00000541951 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
PAAF1-210ENST00000541951 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PAAF1-210ENST00000541951 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
PAAF1-210ENST00000541951 CUX1P39880 1505 aa19.4■□□□□ 0.7
PAAF1-210ENST00000541951 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
PAAF1-210ENST00000541951 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
PAAF1-210ENST00000541951 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.68
PAAF1-210ENST00000541951 WDR62O43379 1518 aa19.33■□□□□ 0.68
PAAF1-210ENST00000541951 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
PAAF1-210ENST00000541951 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
PAAF1-210ENST00000541951 SOGA1O94964 1423 aa19.16■□□□□ 0.66
PAAF1-210ENST00000541951 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
PAAF1-210ENST00000541951 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
PAAF1-210ENST00000541951 EEA1Q15075 1411 aa19.12■□□□□ 0.65
PAAF1-210ENST00000541951 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
PAAF1-210ENST00000541951 CUX2O14529 1486 aa19.09■□□□□ 0.65
PAAF1-210ENST00000541951 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
PAAF1-210ENST00000541951 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
PAAF1-210ENST00000541951 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
PAAF1-210ENST00000541951 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
PAAF1-210ENST00000541951 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
PAAF1-210ENST00000541951 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.62
PAAF1-210ENST00000541951 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
PAAF1-210ENST00000541951 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
PAAF1-210ENST00000541951 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
PAAF1-210ENST00000541951 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
PAAF1-210ENST00000541951 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
PAAF1-210ENST00000541951 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
PAAF1-210ENST00000541951 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
PAAF1-210ENST00000541951 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
PAAF1-210ENST00000541951 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■■■□ 21.4
PAAF1-210ENST00000541951 CUL7Q14999 1698 aa18.89■□□□□ 0.61
PAAF1-210ENST00000541951 IGF1RP08069 1367 aa18.86■□□□□ 0.61
PAAF1-210ENST00000541951 KIF21BO75037 1637 aa18.85■□□□□ 0.61
PAAF1-210ENST00000541951 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
PAAF1-210ENST00000541951 PRXQ9BXM0 1461 aa18.81■□□□□ 0.6
PAAF1-210ENST00000541951 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
PAAF1-210ENST00000541951 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
PAAF1-210ENST00000541951 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
PAAF1-210ENST00000541951 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
PAAF1-210ENST00000541951 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
PAAF1-210ENST00000541951 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
PAAF1-210ENST00000541951 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
PAAF1-210ENST00000541951 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
PAAF1-210ENST00000541951 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
PAAF1-210ENST00000541951 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
PAAF1-210ENST00000541951 GRIN2AQ12879 1464 aa18.64■□□□□ 0.58
PAAF1-210ENST00000541951 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
PAAF1-210ENST00000541951 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
PAAF1-210ENST00000541951 FBLN2P98095 1184 aa18.59■□□□□ 0.57
PAAF1-210ENST00000541951 CTTNBP2Q8WZ74 1663 aa18.58■□□□□ 0.57
PAAF1-210ENST00000541951 CHD1O14646 1710 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms