RNA–Protein interactions for RNA: ENST00000519529.1

CHMP7-206, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 690 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-206ENST00000519529 NISCHQ9Y2I1 1504 aa49.7■■■■■ 5.55
CHMP7-206ENST00000519529 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
CHMP7-206ENST00000519529 ABCC9O60706 1549 aa44.14■■■■■ 4.66
CHMP7-206ENST00000519529 RB1CC1Q8TDY2 1594 aa42.18■■■■■ 4.34
CHMP7-206ENST00000519529 NACADO15069 1562 aa41.95■■■■■ 4.31
CHMP7-206ENST00000519529 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
CHMP7-206ENST00000519529 MYO15BQ96JP2 1530 aa41.42■■■■■ 4.22
CHMP7-206ENST00000519529 UNC13AQ9UPW8 1703 aa41.34■■■■■ 4.21
CHMP7-206ENST00000519529 ZCCHC6Q5VYS8 1495 aaKnown RBP41.26■■■■■ 4.2
CHMP7-206ENST00000519529 PABPN1Q86U42 306 aaKnown RBP eCLIP41.14■■■■■ 4.18
CHMP7-206ENST00000519529 DCAF1Q9Y4B6 1507 aa41.04■■■■■ 4.16
CHMP7-206ENST00000519529 DNAJC5BQ9UF47 199 aa41.02■■■■■ 4.16
CHMP7-206ENST00000519529 BICRAQ9NZM4 1560 aa40.91■■■■■ 4.14
CHMP7-206ENST00000519529 SCRIBQ14160 1630 aa40.6■■■■■ 4.09
CHMP7-206ENST00000519529 SHROOM4Q9ULL8 1493 aa40.33■■■■■ 4.05
CHMP7-206ENST00000519529 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
CHMP7-206ENST00000519529 EIF4G1Q04637 1599 aaKnown RBP39.89■■■■□ 3.98
CHMP7-206ENST00000519529 CECR2Q9BXF3 1484 aa39.7■■■■□ 3.95
CHMP7-206ENST00000519529 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
CHMP7-206ENST00000519529 NCAPD3P42695 1498 aa38.67■■■■□ 3.78
CHMP7-206ENST00000519529 ATAD2BQ9ULI0 1458 aa38.63■■■■□ 3.77
CHMP7-206ENST00000519529 SMARCA2P51531 1590 aa38.58■■■■□ 3.77
CHMP7-206ENST00000519529 BAZ1AQ9NRL2 1556 aaPredicted RBP38.58■■■■□ 3.77
CHMP7-206ENST00000519529 HMGXB3Q12766 1538 aa38.46■■■■□ 3.75
CHMP7-206ENST00000519529 BAZ1BQ9UIG0 1483 aaKnown RBP38.32■■■■□ 3.72
CHMP7-206ENST00000519529 MROH2BQ7Z745 1585 aa38.31■■■■□ 3.72
CHMP7-206ENST00000519529 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
CHMP7-206ENST00000519529 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
CHMP7-206ENST00000519529 NESP48681 1621 aa38.02■■■■□ 3.68
CHMP7-206ENST00000519529 WIZO95785 1651 aa37.95■■■■□ 3.66
CHMP7-206ENST00000519529 CUX2O14529 1486 aa37.86■■■■□ 3.65
CHMP7-206ENST00000519529 LAMC3Q9Y6N6 1575 aa37.81■■■■□ 3.64
CHMP7-206ENST00000519529 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.61
CHMP7-206ENST00000519529 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
CHMP7-206ENST00000519529 THOC2Q8NI27 1593 aaKnown RBP37.57■■■■□ 3.6
CHMP7-206ENST00000519529 PDS5BQ9NTI5 1447 aa37.55■■■■□ 3.6
CHMP7-206ENST00000519529 CADPSQ9ULU8 1353 aa37.53■■■■□ 3.6
CHMP7-206ENST00000519529 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
CHMP7-206ENST00000519529 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
CHMP7-206ENST00000519529 MRC2Q9UBG0 1479 aa37.21■■■■□ 3.55
CHMP7-206ENST00000519529 CFTRP13569 1480 aa37.18■■■■□ 3.54
CHMP7-206ENST00000519529 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
CHMP7-206ENST00000519529 FANCD2Q9BXW9 1451 aa37.14■■■■□ 3.54
CHMP7-206ENST00000519529 WDR62O43379 1518 aa37.11■■■■□ 3.53
CHMP7-206ENST00000519529 PRDM2Q13029 1718 aa37.01■■■■□ 3.51
CHMP7-206ENST00000519529 CCDC88BA6NC98 1476 aa36.99■■■■□ 3.51
CHMP7-206ENST00000519529 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
CHMP7-206ENST00000519529 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
CHMP7-206ENST00000519529 ABCC8Q09428 1581 aa36.41■■■■□ 3.42
CHMP7-206ENST00000519529 DNMBPQ6XZF7 1577 aa36.39■■■■□ 3.42
CHMP7-206ENST00000519529 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
CHMP7-206ENST00000519529 SUPT5HO00267 1087 aaKnown RBP36.32■■■■□ 3.4
CHMP7-206ENST00000519529 ZNF608Q9ULD9 1512 aaPredicted RBP36.29■■■■□ 3.4
CHMP7-206ENST00000519529 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
CHMP7-206ENST00000519529 EIF4G3O43432 1585 aaKnown RBP36.16■■■■□ 3.38
CHMP7-206ENST00000519529 TARBP1Q13395 1621 aaKnown RBP36.15■■■■□ 3.38
CHMP7-206ENST00000519529 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
CHMP7-206ENST00000519529 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.363e-6■■■■□ 20.3
CHMP7-206ENST00000519529 TRIM41Q8WV44 630 aa36.01■■■■□ 3.36
CHMP7-206ENST00000519529 RAD54L2Q9Y4B4 1467 aa36■■■■□ 3.35
CHMP7-206ENST00000519529 CUX1P39880 1505 aa35.98■■■■□ 3.35
CHMP7-206ENST00000519529 SOGA1O94964 1423 aa35.97■■■■□ 3.35
CHMP7-206ENST00000519529 FGD5Q6ZNL6 1462 aa35.97■■■■□ 3.35
CHMP7-206ENST00000519529 CHD1O14646 1710 aa35.89■■■■□ 3.34
CHMP7-206ENST00000519529 TDRD9Q8NDG6 1382 aaKnown RBP35.85■■■■□ 3.33
CHMP7-206ENST00000519529 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
CHMP7-206ENST00000519529 FBLN2P98095 1184 aa35.76■■■■□ 3.32
CHMP7-206ENST00000519529 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
CHMP7-206ENST00000519529 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
CHMP7-206ENST00000519529 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
CHMP7-206ENST00000519529 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
CHMP7-206ENST00000519529 ARHGEF11O15085 1522 aa35.63■■■■□ 3.29
CHMP7-206ENST00000519529 GRIN2BQ13224 1484 aa35.61■■■■□ 3.29
CHMP7-206ENST00000519529 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
CHMP7-206ENST00000519529 MAGI1Q96QZ7 1491 aaPredicted RBP35.58■■■■□ 3.29
CHMP7-206ENST00000519529 GAPVD1Q14C86 1478 aa35.55■■■■□ 3.28
CHMP7-206ENST00000519529 ABCA10Q8WWZ4 1543 aa35.55■■■■□ 3.28
CHMP7-206ENST00000519529 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
CHMP7-206ENST00000519529 CHMP7Q8WUX9 453 aaPredicted RBP35.52■■■■□ 3.28
CHMP7-206ENST00000519529 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
CHMP7-206ENST00000519529 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
CHMP7-206ENST00000519529 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
CHMP7-206ENST00000519529 SYNJ1O43426 1573 aa35.5■■■■□ 3.27
CHMP7-206ENST00000519529 SYNJ2O15056 1496 aa35.45■■■■□ 3.27
CHMP7-206ENST00000519529 CLASP1Q7Z460 1538 aa35.37■■■■□ 3.25
CHMP7-206ENST00000519529 CYB5RLQ6IPT4 315 aa35.36■■■■□ 3.25
CHMP7-206ENST00000519529 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
CHMP7-206ENST00000519529 ADAMTS12P58397 1594 aa35.21■■■■□ 3.23
CHMP7-206ENST00000519529 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
CHMP7-206ENST00000519529 ERICH3Q5RHP9 1530 aa35.13■■■■□ 3.21
CHMP7-206ENST00000519529 FHAD1B1AJZ9 1412 aa35.09■■■■□ 3.21
CHMP7-206ENST00000519529 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
CHMP7-206ENST00000519529 NUP160Q12769 1436 aa34.99■■■■□ 3.19
CHMP7-206ENST00000519529 TRHP20396 242 aaPredicted RBP34.89■■■■□ 3.18
CHMP7-206ENST00000519529 ERCC6L2Q5T890 1561 aa34.88■■■■□ 3.17
CHMP7-206ENST00000519529 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
CHMP7-206ENST00000519529 KIF27Q86VH2 1401 aa34.82■■■■□ 3.17
CHMP7-206ENST00000519529 CUL7Q14999 1698 aa34.74■■■■□ 3.15
CHMP7-206ENST00000519529 IGF1RP08069 1367 aa34.73■■■■□ 3.15
CHMP7-206ENST00000519529 RUSC2Q8N2Y8 1516 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms