RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
CHMP7-203ENST00000517325 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
CHMP7-203ENST00000517325 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
CHMP7-203ENST00000517325 SHROOM4Q9ULL8 1493 aa30.07■■■□□ 2.4
CHMP7-203ENST00000517325 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
CHMP7-203ENST00000517325 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
CHMP7-203ENST00000517325 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
CHMP7-203ENST00000517325 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
CHMP7-203ENST00000517325 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
CHMP7-203ENST00000517325 ABCC9O60706 1549 aa28.57■■■□□ 2.16
CHMP7-203ENST00000517325 NACADO15069 1562 aa28.4■■■□□ 2.14
CHMP7-203ENST00000517325 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
CHMP7-203ENST00000517325 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
CHMP7-203ENST00000517325 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
CHMP7-203ENST00000517325 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
CHMP7-203ENST00000517325 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
CHMP7-203ENST00000517325 WIZO95785 1651 aa27.6■■■□□ 2.01
CHMP7-203ENST00000517325 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2
CHMP7-203ENST00000517325 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
CHMP7-203ENST00000517325 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
CHMP7-203ENST00000517325 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
CHMP7-203ENST00000517325 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
CHMP7-203ENST00000517325 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
CHMP7-203ENST00000517325 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
CHMP7-203ENST00000517325 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
CHMP7-203ENST00000517325 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
CHMP7-203ENST00000517325 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
CHMP7-203ENST00000517325 HRCP23327 699 aa27.04■■□□□ 1.92
CHMP7-203ENST00000517325 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
CHMP7-203ENST00000517325 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
CHMP7-203ENST00000517325 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
CHMP7-203ENST00000517325 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
CHMP7-203ENST00000517325 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
CHMP7-203ENST00000517325 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
CHMP7-203ENST00000517325 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
CHMP7-203ENST00000517325 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
CHMP7-203ENST00000517325 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
CHMP7-203ENST00000517325 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
CHMP7-203ENST00000517325 SOGA1O94964 1423 aa26.49■■□□□ 1.83
CHMP7-203ENST00000517325 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
CHMP7-203ENST00000517325 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
CHMP7-203ENST00000517325 EEA1Q15075 1411 aa26.36■■□□□ 1.81
CHMP7-203ENST00000517325 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
CHMP7-203ENST00000517325 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
CHMP7-203ENST00000517325 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
CHMP7-203ENST00000517325 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
CHMP7-203ENST00000517325 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
CHMP7-203ENST00000517325 CEP162Q5TB80 1403 aa26.21■■□□□ 1.79
CHMP7-203ENST00000517325 GOLGA3Q08378 1498 aa26.13■■□□□ 1.77
CHMP7-203ENST00000517325 UBTFP17480 764 aaKnown RBP26.1■■□□□ 1.77
CHMP7-203ENST00000517325 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
CHMP7-203ENST00000517325 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
CHMP7-203ENST00000517325 KIF21BO75037 1637 aa26.03■■□□□ 1.76
CHMP7-203ENST00000517325 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
CHMP7-203ENST00000517325 CFTRP13569 1480 aa25.95■■□□□ 1.74
CHMP7-203ENST00000517325 ZEB1P37275 1124 aaPredicted RBP25.92■■□□□ 1.74
CHMP7-203ENST00000517325 CUX1P39880 1505 aa25.89■■□□□ 1.74
CHMP7-203ENST00000517325 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
CHMP7-203ENST00000517325 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
CHMP7-203ENST00000517325 CLIP1P30622 1438 aa25.8■■□□□ 1.72
CHMP7-203ENST00000517325 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
CHMP7-203ENST00000517325 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
CHMP7-203ENST00000517325 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
CHMP7-203ENST00000517325 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
CHMP7-203ENST00000517325 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
CHMP7-203ENST00000517325 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
CHMP7-203ENST00000517325 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
CHMP7-203ENST00000517325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
CHMP7-203ENST00000517325 RANGAP1P46060 587 aaPredicted RBP25.61■■□□□ 1.69
CHMP7-203ENST00000517325 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
CHMP7-203ENST00000517325 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
CHMP7-203ENST00000517325 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
CHMP7-203ENST00000517325 CUX2O14529 1486 aa25.48■■□□□ 1.67
CHMP7-203ENST00000517325 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
CHMP7-203ENST00000517325 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
CHMP7-203ENST00000517325 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
CHMP7-203ENST00000517325 APLP2Q06481 763 aa25.43■■□□□ 1.66
CHMP7-203ENST00000517325 IGF1RP08069 1367 aa25.41■■□□□ 1.66
CHMP7-203ENST00000517325 NESP48681 1621 aa25.37■■□□□ 1.65
CHMP7-203ENST00000517325 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
CHMP7-203ENST00000517325 ARHGAP35Q9NRY4 1499 aa25.3■■□□□ 1.64
CHMP7-203ENST00000517325 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
CHMP7-203ENST00000517325 HNRNPUL2Q1KMD3 747 aaKnown RBP25.28■■□□□ 1.64
CHMP7-203ENST00000517325 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
CHMP7-203ENST00000517325 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
CHMP7-203ENST00000517325 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
CHMP7-203ENST00000517325 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
CHMP7-203ENST00000517325 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.63
CHMP7-203ENST00000517325 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
CHMP7-203ENST00000517325 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
CHMP7-203ENST00000517325 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
CHMP7-203ENST00000517325 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
CHMP7-203ENST00000517325 PDS5BQ9NTI5 1447 aa25.02■■□□□ 1.6
CHMP7-203ENST00000517325 RRBP1Q9P2E9 1410 aaKnown RBP25.01■■□□□ 1.6
CHMP7-203ENST00000517325 CUL7Q14999 1698 aa25.01■■□□□ 1.59
CHMP7-203ENST00000517325 TIAM1Q13009 1591 aa24.97■■□□□ 1.59
CHMP7-203ENST00000517325 KIF21AQ7Z4S6 1674 aa24.96■■□□□ 1.59
CHMP7-203ENST00000517325 NEUROD1Q13562 356 aa24.95■■□□□ 1.58
CHMP7-203ENST00000517325 MAP3K1Q13233 1512 aa24.95■■□□□ 1.58
CHMP7-203ENST00000517325 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms