RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
PAAF1-214ENST00000544552 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
PAAF1-214ENST00000544552 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
PAAF1-214ENST00000544552 ABCC9O60706 1549 aa23.88■■□□□ 1.41
PAAF1-214ENST00000544552 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
PAAF1-214ENST00000544552 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
PAAF1-214ENST00000544552 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
PAAF1-214ENST00000544552 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
PAAF1-214ENST00000544552 NACADO15069 1562 aa23.25■■□□□ 1.31
PAAF1-214ENST00000544552 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
PAAF1-214ENST00000544552 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
PAAF1-214ENST00000544552 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
PAAF1-214ENST00000544552 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
PAAF1-214ENST00000544552 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
PAAF1-214ENST00000544552 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.18
PAAF1-214ENST00000544552 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
PAAF1-214ENST00000544552 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
PAAF1-214ENST00000544552 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
PAAF1-214ENST00000544552 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
PAAF1-214ENST00000544552 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
PAAF1-214ENST00000544552 WIZO95785 1651 aa21.83■■□□□ 1.09
PAAF1-214ENST00000544552 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
PAAF1-214ENST00000544552 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
PAAF1-214ENST00000544552 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
PAAF1-214ENST00000544552 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
PAAF1-214ENST00000544552 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
PAAF1-214ENST00000544552 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
PAAF1-214ENST00000544552 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
PAAF1-214ENST00000544552 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
PAAF1-214ENST00000544552 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
PAAF1-214ENST00000544552 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
PAAF1-214ENST00000544552 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
PAAF1-214ENST00000544552 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
PAAF1-214ENST00000544552 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
PAAF1-214ENST00000544552 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
PAAF1-214ENST00000544552 CFTRP13569 1480 aa20.9■□□□□ 0.94
PAAF1-214ENST00000544552 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.94
PAAF1-214ENST00000544552 CADPSQ9ULU8 1353 aa20.87■□□□□ 0.93
PAAF1-214ENST00000544552 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
PAAF1-214ENST00000544552 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
PAAF1-214ENST00000544552 NESP48681 1621 aa20.77■□□□□ 0.92
PAAF1-214ENST00000544552 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
PAAF1-214ENST00000544552 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
PAAF1-214ENST00000544552 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
PAAF1-214ENST00000544552 EEA1Q15075 1411 aa20.72■□□□□ 0.91
PAAF1-214ENST00000544552 TOP2BQ02880 1626 aa20.7■□□□□ 0.9
PAAF1-214ENST00000544552 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
PAAF1-214ENST00000544552 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
PAAF1-214ENST00000544552 SOGA1O94964 1423 aa20.65■□□□□ 0.9
PAAF1-214ENST00000544552 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
PAAF1-214ENST00000544552 CUX1P39880 1505 aa20.59■□□□□ 0.89
PAAF1-214ENST00000544552 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
PAAF1-214ENST00000544552 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
PAAF1-214ENST00000544552 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
PAAF1-214ENST00000544552 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
PAAF1-214ENST00000544552 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
PAAF1-214ENST00000544552 MRC2Q9UBG0 1479 aa20.42■□□□□ 0.86
PAAF1-214ENST00000544552 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.86
PAAF1-214ENST00000544552 KIF21BO75037 1637 aa20.39■□□□□ 0.85
PAAF1-214ENST00000544552 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
PAAF1-214ENST00000544552 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
PAAF1-214ENST00000544552 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
PAAF1-214ENST00000544552 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
PAAF1-214ENST00000544552 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
PAAF1-214ENST00000544552 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
PAAF1-214ENST00000544552 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
PAAF1-214ENST00000544552 WDR62O43379 1518 aa20.33■□□□□ 0.84
PAAF1-214ENST00000544552 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
PAAF1-214ENST00000544552 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
PAAF1-214ENST00000544552 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
PAAF1-214ENST00000544552 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
PAAF1-214ENST00000544552 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
PAAF1-214ENST00000544552 CUX2O14529 1486 aa20.24■□□□□ 0.83
PAAF1-214ENST00000544552 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
PAAF1-214ENST00000544552 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
PAAF1-214ENST00000544552 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
PAAF1-214ENST00000544552 IGF1RP08069 1367 aa20.18■□□□□ 0.82
PAAF1-214ENST00000544552 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
PAAF1-214ENST00000544552 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
PAAF1-214ENST00000544552 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
PAAF1-214ENST00000544552 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
PAAF1-214ENST00000544552 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
PAAF1-214ENST00000544552 CLIP1P30622 1438 aa20.06■□□□□ 0.8
PAAF1-214ENST00000544552 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PAAF1-214ENST00000544552 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
PAAF1-214ENST00000544552 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
PAAF1-214ENST00000544552 CUL7Q14999 1698 aa19.97■□□□□ 0.79
PAAF1-214ENST00000544552 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
PAAF1-214ENST00000544552 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
PAAF1-214ENST00000544552 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
PAAF1-214ENST00000544552 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
PAAF1-214ENST00000544552 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■■□ 21.4
PAAF1-214ENST00000544552 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
PAAF1-214ENST00000544552 GRIN2BQ13224 1484 aa19.83■□□□□ 0.77
PAAF1-214ENST00000544552 ARAP1Q96P48 1450 aa19.83■□□□□ 0.77
PAAF1-214ENST00000544552 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
PAAF1-214ENST00000544552 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
PAAF1-214ENST00000544552 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
PAAF1-214ENST00000544552 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
PAAF1-214ENST00000544552 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms