RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 NISCHQ9Y2I1 1504 aa53.87■■■■■ 6.21
CHMP7-205ENST00000519503 CCDC180Q9P1Z9 1646 aa48.31■■■■■ 5.32
CHMP7-205ENST00000519503 ABCC9O60706 1549 aa47.8■■■■■ 5.24
CHMP7-205ENST00000519503 RB1CC1Q8TDY2 1594 aa45.77■■■■■ 4.92
CHMP7-205ENST00000519503 NACADO15069 1562 aa45.54■■■■■ 4.88
CHMP7-205ENST00000519503 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
CHMP7-205ENST00000519503 MYO15BQ96JP2 1530 aa45.06■■■■■ 4.8
CHMP7-205ENST00000519503 UNC13AQ9UPW8 1703 aa44.75■■■■■ 4.75
CHMP7-205ENST00000519503 ZCCHC6Q5VYS8 1495 aaKnown RBP44.72■■■■■ 4.75
CHMP7-205ENST00000519503 DCAF1Q9Y4B6 1507 aa44.6■■■■■ 4.73
CHMP7-205ENST00000519503 PABPN1Q86U42 306 aaKnown RBP eCLIP44.48■■■■■ 4.71
CHMP7-205ENST00000519503 DNAJC5BQ9UF47 199 aa44.42■■■■■ 4.7
CHMP7-205ENST00000519503 BICRAQ9NZM4 1560 aa44.35■■■■■ 4.69
CHMP7-205ENST00000519503 SHROOM4Q9ULL8 1493 aa43.94■■■■■ 4.62
CHMP7-205ENST00000519503 SCRIBQ14160 1630 aa43.92■■■■■ 4.62
CHMP7-205ENST00000519503 EIF4G1Q04637 1599 aaKnown RBP43.27■■■■■ 4.52
CHMP7-205ENST00000519503 CC2D2AQ9P2K1 1620 aa43.26■■■■■ 4.52
CHMP7-205ENST00000519503 CECR2Q9BXF3 1484 aa43.06■■■■■ 4.48
CHMP7-205ENST00000519503 NCAPD3P42695 1498 aa41.98■■■■■ 4.31
CHMP7-205ENST00000519503 SMARCA4P51532 1647 aa41.98■■■■■ 4.31
CHMP7-205ENST00000519503 ATAD2BQ9ULI0 1458 aa41.88■■■■■ 4.29
CHMP7-205ENST00000519503 SMARCA2P51531 1590 aa41.87■■■■■ 4.29
CHMP7-205ENST00000519503 BAZ1AQ9NRL2 1556 aaPredicted RBP41.84■■■■■ 4.29
CHMP7-205ENST00000519503 HMGXB3Q12766 1538 aa41.76■■■■■ 4.28
CHMP7-205ENST00000519503 PEG3Q9GZU2 1588 aa41.6■■■■■ 4.25
CHMP7-205ENST00000519503 BAZ1BQ9UIG0 1483 aaKnown RBP41.53■■■■■ 4.24
CHMP7-205ENST00000519503 MROH2BQ7Z745 1585 aa41.46■■■■■ 4.23
CHMP7-205ENST00000519503 ERCC6Q03468 1493 aa41.31■■■■■ 4.2
CHMP7-205ENST00000519503 CUX2O14529 1486 aa41.16■■■■■ 4.18
CHMP7-205ENST00000519503 NESP48681 1621 aa41.14■■■■■ 4.18
CHMP7-205ENST00000519503 LAMC3Q9Y6N6 1575 aa41.04■■■■■ 4.16
CHMP7-205ENST00000519503 WIZO95785 1651 aa41.01■■■■■ 4.16
CHMP7-205ENST00000519503 PDS5BQ9NTI5 1447 aa40.76■■■■■ 4.11
CHMP7-205ENST00000519503 THOC2Q8NI27 1593 aaKnown RBP40.75■■■■■ 4.11
CHMP7-205ENST00000519503 KIF21AQ7Z4S6 1674 aa40.73■■■■■ 4.11
CHMP7-205ENST00000519503 RSF1Q96T23 1441 aaPredicted RBP40.73■■■■■ 4.11
CHMP7-205ENST00000519503 CADPSQ9ULU8 1353 aa40.7■■■■■ 4.11
CHMP7-205ENST00000519503 DNAJC5Q9H3Z4 198 aa40.64■■■■■ 4.1
CHMP7-205ENST00000519503 TOP2AP11388 1531 aaKnown RBP40.56■■■■■ 4.08
CHMP7-205ENST00000519503 MRC2Q9UBG0 1479 aa40.38■■■■■ 4.05
CHMP7-205ENST00000519503 CFTRP13569 1480 aa40.33■■■■■ 4.05
CHMP7-205ENST00000519503 CEP164Q9UPV0 1460 aa40.3■■■■■ 4.04
CHMP7-205ENST00000519503 WDR62O43379 1518 aa40.29■■■■■ 4.04
CHMP7-205ENST00000519503 FANCD2Q9BXW9 1451 aa40.26■■■■■ 4.03
CHMP7-205ENST00000519503 PRDM2Q13029 1718 aa40.11■■■■■ 4.01
CHMP7-205ENST00000519503 CCDC88BA6NC98 1476 aa40.03■■■■■ 4
CHMP7-205ENST00000519503 URB2Q14146 1524 aaKnown RBP39.88■■■■□ 3.97
CHMP7-205ENST00000519503 ABCC8Q09428 1581 aa39.55■■■■□ 3.92
CHMP7-205ENST00000519503 TOPBP1Q92547 1522 aa39.53■■■■□ 3.92
CHMP7-205ENST00000519503 IFT140Q96RY7 1462 aa39.48■■■■□ 3.91
CHMP7-205ENST00000519503 DNMBPQ6XZF7 1577 aa39.46■■■■□ 3.91
CHMP7-205ENST00000519503 ZNF608Q9ULD9 1512 aaPredicted RBP39.3■■■■□ 3.88
CHMP7-205ENST00000519503 OSCARQ8IYS5 282 aa39.25■■■■□ 3.87
CHMP7-205ENST00000519503 EIF4G3O43432 1585 aaKnown RBP39.19■■■■□ 3.86
CHMP7-205ENST00000519503 TARBP1Q13395 1621 aaKnown RBP39.18■■■■□ 3.86
CHMP7-205ENST00000519503 POLA1P09884 1462 aaPredicted RBP39.14■■■■□ 3.86
CHMP7-205ENST00000519503 SUPT5HO00267 1087 aaKnown RBP39.09■■■■□ 3.85
CHMP7-205ENST00000519503 AQRO60306 1485 aaKnown RBP eCLIP38.98■■■■□ 3.833e-6■■■■□ 20.3
CHMP7-205ENST00000519503 CUX1P39880 1505 aa38.96■■■■□ 3.83
CHMP7-205ENST00000519503 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
CHMP7-205ENST00000519503 SOGA1O94964 1423 aa38.95■■■■□ 3.83
CHMP7-205ENST00000519503 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
CHMP7-205ENST00000519503 RAD54L2Q9Y4B4 1467 aa38.93■■■■□ 3.82
CHMP7-205ENST00000519503 WDR97A6NE52 1622 aa38.92■■■■□ 3.82
CHMP7-205ENST00000519503 CHD1O14646 1710 aa38.86■■■■□ 3.81
CHMP7-205ENST00000519503 TDRD9Q8NDG6 1382 aaKnown RBP38.79■■■■□ 3.8
CHMP7-205ENST00000519503 RIMBP3CA6NJZ7 1639 aa38.75■■■■□ 3.79
CHMP7-205ENST00000519503 RIMBP3BA6NNM3 1639 aa38.75■■■■□ 3.79
CHMP7-205ENST00000519503 RIMBP3Q9UFD9 1639 aa38.75■■■■□ 3.79
CHMP7-205ENST00000519503 ARHGEF11O15085 1522 aa38.66■■■■□ 3.78
CHMP7-205ENST00000519503 FBLN2P98095 1184 aa38.64■■■■□ 3.78
CHMP7-205ENST00000519503 SNAPC4Q5SXM2 1469 aa38.64■■■■□ 3.78
CHMP7-205ENST00000519503 GRIN2BQ13224 1484 aa38.61■■■■□ 3.77
CHMP7-205ENST00000519503 MAGI1Q96QZ7 1491 aaPredicted RBP38.61■■■■□ 3.77
CHMP7-205ENST00000519503 ABCA10Q8WWZ4 1543 aa38.55■■■■□ 3.76
CHMP7-205ENST00000519503 PBRM1Q86U86 1689 aa38.55■■■■□ 3.76
CHMP7-205ENST00000519503 GAPVD1Q14C86 1478 aa38.52■■■■□ 3.76
CHMP7-205ENST00000519503 BIVM-ERCC5R4GMW8 1640 aa38.5■■■■□ 3.75
CHMP7-205ENST00000519503 TOP2BQ02880 1626 aa38.49■■■■□ 3.75
CHMP7-205ENST00000519503 ABCA5Q8WWZ7 1642 aa38.49■■■■□ 3.75
CHMP7-205ENST00000519503 SYNJ2O15056 1496 aa38.46■■■■□ 3.75
CHMP7-205ENST00000519503 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
CHMP7-205ENST00000519503 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
CHMP7-205ENST00000519503 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
CHMP7-205ENST00000519503 CLASP1Q7Z460 1538 aa38.39■■■■□ 3.74
CHMP7-205ENST00000519503 ARAP1Q96P48 1450 aa38.28■■■■□ 3.72
CHMP7-205ENST00000519503 CYB5RLQ6IPT4 315 aa38.27■■■■□ 3.72
CHMP7-205ENST00000519503 ADAMTS12P58397 1594 aa38.17■■■■□ 3.7
CHMP7-205ENST00000519503 GRIN2AQ12879 1464 aa38.12■■■■□ 3.69
CHMP7-205ENST00000519503 ERICH3Q5RHP9 1530 aa38.11■■■■□ 3.69
CHMP7-205ENST00000519503 FHAD1B1AJZ9 1412 aa38.04■■■■□ 3.68
CHMP7-205ENST00000519503 NUP160Q12769 1436 aa37.97■■■■□ 3.67
CHMP7-205ENST00000519503 CEP170Q5SW79 1584 aa37.95■■■■□ 3.67
CHMP7-205ENST00000519503 SHROOM2Q13796 1616 aa37.81■■■■□ 3.64
CHMP7-205ENST00000519503 TRHP20396 242 aaPredicted RBP37.74■■■■□ 3.63
CHMP7-205ENST00000519503 ERCC6L2Q5T890 1561 aa37.73■■■■□ 3.63
CHMP7-205ENST00000519503 KIF27Q86VH2 1401 aa37.72■■■■□ 3.63
CHMP7-205ENST00000519503 CUL7Q14999 1698 aa37.66■■■■□ 3.62
CHMP7-205ENST00000519503 RUSC2Q8N2Y8 1516 aa37.63■■■■□ 3.61
CHMP7-205ENST00000519503 IGF1RP08069 1367 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms