Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 KRT17P3-201ENST00000420566 1262 ntBASIC17.38■□□□□ 0.37
TNFRSF1BP20333 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFRSF1BP20333 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 AC135776.1-201ENST00000319817 2481 ntBASIC17.37■□□□□ 0.37
TNFRSF1BP20333 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 AC239809.2-201ENST00000415381 517 ntBASIC17.37■□□□□ 0.37
TNFRSF1BP20333 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 AC026366.1-201ENST00000488803 879 ntBASIC17.37■□□□□ 0.37
TNFRSF1BP20333 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFRSF1BP20333 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFRSF1BP20333 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 HCG11-201ENST00000411553 5696 ntBASIC17.35■□□□□ 0.37
TNFRSF1BP20333 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TNFRSF1BP20333 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms