RNA–Protein interactions for RNA: ENST00000423588.1

CACNA2D1-203, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNA2D1, Length 1,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-203ENST00000423588 NISCHQ9Y2I1 1504 aa49.68■■■■■ 5.54
CACNA2D1-203ENST00000423588 CCDC180Q9P1Z9 1646 aa44.49■■■■■ 4.71
CACNA2D1-203ENST00000423588 ABCC9O60706 1549 aa43.95■■■■■ 4.63
CACNA2D1-203ENST00000423588 RB1CC1Q8TDY2 1594 aa42.1■■■■■ 4.33
CACNA2D1-203ENST00000423588 NACADO15069 1562 aa41.9■■■■■ 4.3
CACNA2D1-203ENST00000423588 DCAF8L2P0C7V8 631 aa41.68■■■■■ 4.26
CACNA2D1-203ENST00000423588 MYO15BQ96JP2 1530 aa41.46■■■■■ 4.23
CACNA2D1-203ENST00000423588 ZCCHC6Q5VYS8 1495 aaKnown RBP41.26■■■■■ 4.2
CACNA2D1-203ENST00000423588 UNC13AQ9UPW8 1703 aa41.22■■■■■ 4.19
CACNA2D1-203ENST00000423588 DCAF1Q9Y4B6 1507 aa41.09■■■■■ 4.17
CACNA2D1-203ENST00000423588 PABPN1Q86U42 306 aaKnown RBP eCLIP40.93■■■■■ 4.14
CACNA2D1-203ENST00000423588 BICRAQ9NZM4 1560 aa40.82■■■■■ 4.13
CACNA2D1-203ENST00000423588 DNAJC5BQ9UF47 199 aa40.78■■■■■ 4.12
CACNA2D1-203ENST00000423588 SCRIBQ14160 1630 aa40.5■■■■■ 4.07
CACNA2D1-203ENST00000423588 SHROOM4Q9ULL8 1493 aa40.35■■■■■ 4.05
CACNA2D1-203ENST00000423588 EIF4G1Q04637 1599 aaKnown RBP39.79■■■■□ 3.96
CACNA2D1-203ENST00000423588 CC2D2AQ9P2K1 1620 aa39.78■■■■□ 3.96
CACNA2D1-203ENST00000423588 CECR2Q9BXF3 1484 aa39.55■■■■□ 3.92
CACNA2D1-203ENST00000423588 SMARCA4P51532 1647 aa38.7■■■■□ 3.79
CACNA2D1-203ENST00000423588 NCAPD3P42695 1498 aa38.63■■■■□ 3.77
CACNA2D1-203ENST00000423588 ATAD2BQ9ULI0 1458 aa38.57■■■■□ 3.77
CACNA2D1-203ENST00000423588 BAZ1AQ9NRL2 1556 aaPredicted RBP38.56■■■■□ 3.76
CACNA2D1-203ENST00000423588 SMARCA2P51531 1590 aa38.54■■■■□ 3.76
CACNA2D1-203ENST00000423588 HMGXB3Q12766 1538 aa38.44■■■■□ 3.74
CACNA2D1-203ENST00000423588 PEG3Q9GZU2 1588 aa38.32■■■■□ 3.72
CACNA2D1-203ENST00000423588 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
CACNA2D1-203ENST00000423588 BAZ1BQ9UIG0 1483 aaKnown RBP38.25■■■■□ 3.71
CACNA2D1-203ENST00000423588 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
CACNA2D1-203ENST00000423588 NESP48681 1621 aa37.88■■■■□ 3.65
CACNA2D1-203ENST00000423588 WIZO95785 1651 aa37.87■■■■□ 3.65
CACNA2D1-203ENST00000423588 LAMC3Q9Y6N6 1575 aa37.75■■■■□ 3.63
CACNA2D1-203ENST00000423588 CUX2O14529 1486 aa37.74■■■■□ 3.63
CACNA2D1-203ENST00000423588 RSF1Q96T23 1441 aaPredicted RBP37.61■■■■□ 3.61
CACNA2D1-203ENST00000423588 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
CACNA2D1-203ENST00000423588 THOC2Q8NI27 1593 aaKnown RBP37.48■■■■□ 3.59
CACNA2D1-203ENST00000423588 PDS5BQ9NTI5 1447 aa37.47■■■■□ 3.59
CACNA2D1-203ENST00000423588 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
CACNA2D1-203ENST00000423588 TOP2AP11388 1531 aaKnown RBP37.41■■■■□ 3.58
CACNA2D1-203ENST00000423588 DNAJC5Q9H3Z4 198 aa37.18■■■■□ 3.54
CACNA2D1-203ENST00000423588 CFTRP13569 1480 aa37.15■■■■□ 3.54
CACNA2D1-203ENST00000423588 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.53
CACNA2D1-203ENST00000423588 CEP164Q9UPV0 1460 aa37.08■■■■□ 3.53
CACNA2D1-203ENST00000423588 FANCD2Q9BXW9 1451 aa37.06■■■■□ 3.52
CACNA2D1-203ENST00000423588 WDR62O43379 1518 aa37.04■■■■□ 3.52
CACNA2D1-203ENST00000423588 PRDM2Q13029 1718 aa36.97■■■■□ 3.51
CACNA2D1-203ENST00000423588 CCDC88BA6NC98 1476 aa36.95■■■■□ 3.51
CACNA2D1-203ENST00000423588 URB2Q14146 1524 aaKnown RBP36.72■■■■□ 3.47
CACNA2D1-203ENST00000423588 TOPBP1Q92547 1522 aa36.42■■■■□ 3.42
CACNA2D1-203ENST00000423588 ABCC8Q09428 1581 aa36.39■■■■□ 3.42
CACNA2D1-203ENST00000423588 DNMBPQ6XZF7 1577 aa36.35■■■■□ 3.41
CACNA2D1-203ENST00000423588 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
CACNA2D1-203ENST00000423588 SUPT5HO00267 1087 aaKnown RBP36.23■■■■□ 3.39
CACNA2D1-203ENST00000423588 ZNF608Q9ULD9 1512 aaPredicted RBP36.18■■■■□ 3.38
CACNA2D1-203ENST00000423588 TARBP1Q13395 1621 aaKnown RBP36.09■■■■□ 3.37
CACNA2D1-203ENST00000423588 EIF4G3O43432 1585 aaKnown RBP36.08■■■■□ 3.37
CACNA2D1-203ENST00000423588 POLA1P09884 1462 aaPredicted RBP36.06■■■■□ 3.36
CACNA2D1-203ENST00000423588 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
CACNA2D1-203ENST00000423588 CUX1P39880 1505 aa35.94■■■■□ 3.34
CACNA2D1-203ENST00000423588 AQRO60306 1485 aaKnown RBP eCLIP35.9■■■■□ 3.34
CACNA2D1-203ENST00000423588 FGD5Q6ZNL6 1462 aa35.9■■■■□ 3.34
CACNA2D1-203ENST00000423588 RAD54L2Q9Y4B4 1467 aa35.89■■■■□ 3.34
CACNA2D1-203ENST00000423588 SOGA1O94964 1423 aa35.89■■■■□ 3.34
CACNA2D1-203ENST00000423588 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
CACNA2D1-203ENST00000423588 CHD1O14646 1710 aa35.76■■■■□ 3.32
CACNA2D1-203ENST00000423588 TDRD9Q8NDG6 1382 aaKnown RBP35.74■■■■□ 3.31
CACNA2D1-203ENST00000423588 TRIM41Q8WV44 630 aa35.71■■■■□ 3.31
CACNA2D1-203ENST00000423588 RIMBP3CA6NJZ7 1639 aa35.59■■■■□ 3.29
CACNA2D1-203ENST00000423588 RIMBP3BA6NNM3 1639 aa35.59■■■■□ 3.29
CACNA2D1-203ENST00000423588 RIMBP3Q9UFD9 1639 aa35.59■■■■□ 3.29
CACNA2D1-203ENST00000423588 SNAPC4Q5SXM2 1469 aa35.58■■■■□ 3.29
CACNA2D1-203ENST00000423588 FBLN2P98095 1184 aa35.57■■■■□ 3.29
CACNA2D1-203ENST00000423588 GRIN2BQ13224 1484 aa35.55■■■■□ 3.28
CACNA2D1-203ENST00000423588 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
CACNA2D1-203ENST00000423588 ABCA10Q8WWZ4 1543 aa35.53■■■■□ 3.28
CACNA2D1-203ENST00000423588 PBRM1Q86U86 1689 aa35.53■■■■□ 3.28
CACNA2D1-203ENST00000423588 MAGI1Q96QZ7 1491 aaPredicted RBP35.52■■■■□ 3.28
CACNA2D1-203ENST00000423588 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
CACNA2D1-203ENST00000423588 ARHGEF11O15085 1522 aa35.5■■■■□ 3.27
CACNA2D1-203ENST00000423588 WRNQ14191 1432 aaPredicted RBP eCLIP35.5■■■■□ 3.27
CACNA2D1-203ENST00000423588 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
CACNA2D1-203ENST00000423588 ABCA5Q8WWZ7 1642 aa35.47■■■■□ 3.27
CACNA2D1-203ENST00000423588 SYNJ1O43426 1573 aa35.46■■■■□ 3.27
CACNA2D1-203ENST00000423588 SYNJ2O15056 1496 aa35.39■■■■□ 3.26
CACNA2D1-203ENST00000423588 CHMP7Q8WUX9 453 aaPredicted RBP35.39■■■■□ 3.26
CACNA2D1-203ENST00000423588 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
CACNA2D1-203ENST00000423588 ARAP1Q96P48 1450 aa35.17■■■■□ 3.22
CACNA2D1-203ENST00000423588 ADAMTS12P58397 1594 aa35.17■■■■□ 3.22
CACNA2D1-203ENST00000423588 CYB5RLQ6IPT4 315 aa35.15■■■■□ 3.22
CACNA2D1-203ENST00000423588 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
CACNA2D1-203ENST00000423588 GRIN2AQ12879 1464 aa35.1■■■■□ 3.21
CACNA2D1-203ENST00000423588 FHAD1B1AJZ9 1412 aa35.04■■■■□ 3.2
CACNA2D1-203ENST00000423588 CEP170Q5SW79 1584 aa34.96■■■■□ 3.19
CACNA2D1-203ENST00000423588 NUP160Q12769 1436 aa34.95■■■■□ 3.19
CACNA2D1-203ENST00000423588 SHROOM2Q13796 1616 aa34.81■■■■□ 3.16
CACNA2D1-203ENST00000423588 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
CACNA2D1-203ENST00000423588 ERCC6L2Q5T890 1561 aa34.76■■■■□ 3.15
CACNA2D1-203ENST00000423588 CUL7Q14999 1698 aa34.73■■■■□ 3.15
CACNA2D1-203ENST00000423588 IGF1RP08069 1367 aa34.69■■■■□ 3.14
CACNA2D1-203ENST00000423588 RUSC2Q8N2Y8 1516 aa34.67■■■■□ 3.14
CACNA2D1-203ENST00000423588 TRHP20396 242 aaPredicted RBP34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms