RNA–Protein interactions for RNA: ENST00000617074.4

HSPA4-205, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

TSL 5 BASIC

Gene HSPA4, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-205ENST00000617074 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
HSPA4-205ENST00000617074 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
HSPA4-205ENST00000617074 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
HSPA4-205ENST00000617074 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
HSPA4-205ENST00000617074 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
HSPA4-205ENST00000617074 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.62
HSPA4-205ENST00000617074 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
HSPA4-205ENST00000617074 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
HSPA4-205ENST00000617074 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
HSPA4-205ENST00000617074 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
HSPA4-205ENST00000617074 ABCC9O60706 1549 aa30.19■■■□□ 2.42
HSPA4-205ENST00000617074 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
HSPA4-205ENST00000617074 NACADO15069 1562 aa29.89■■■□□ 2.38
HSPA4-205ENST00000617074 LOC105371045A0A1W2PR82 267 aa29.67■■■□□ 2.34
HSPA4-205ENST00000617074 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
HSPA4-205ENST00000617074 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
HSPA4-205ENST00000617074 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
HSPA4-205ENST00000617074 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
HSPA4-205ENST00000617074 HRCP23327 699 aa29.42■■■□□ 2.3
HSPA4-205ENST00000617074 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
HSPA4-205ENST00000617074 WIZO95785 1651 aa29.28■■■□□ 2.28
HSPA4-205ENST00000617074 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
HSPA4-205ENST00000617074 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
HSPA4-205ENST00000617074 TRIM26Q12899 539 aaPredicted RBP29.01■■■□□ 2.23
HSPA4-205ENST00000617074 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
HSPA4-205ENST00000617074 SMARCA4P51532 1647 aa28.89■■■□□ 2.21
HSPA4-205ENST00000617074 EHMT2Q96KQ7 1210 aa28.85■■■□□ 2.21
HSPA4-205ENST00000617074 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
HSPA4-205ENST00000617074 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
HSPA4-205ENST00000617074 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
HSPA4-205ENST00000617074 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
HSPA4-205ENST00000617074 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
HSPA4-205ENST00000617074 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
HSPA4-205ENST00000617074 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
HSPA4-205ENST00000617074 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
HSPA4-205ENST00000617074 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
HSPA4-205ENST00000617074 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
HSPA4-205ENST00000617074 SOGA1O94964 1423 aa28.29■■■□□ 2.12
HSPA4-205ENST00000617074 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
HSPA4-205ENST00000617074 EEA1Q15075 1411 aa28.15■■■□□ 2.1
HSPA4-205ENST00000617074 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
HSPA4-205ENST00000617074 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
HSPA4-205ENST00000617074 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
HSPA4-205ENST00000617074 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
HSPA4-205ENST00000617074 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
HSPA4-205ENST00000617074 TNIKQ9UKE5 1360 aa28.09■■■□□ 2.09
HSPA4-205ENST00000617074 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
HSPA4-205ENST00000617074 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
HSPA4-205ENST00000617074 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
HSPA4-205ENST00000617074 TTBK1Q5TCY1 1321 aaPredicted RBP27.89■■■□□ 2.06
HSPA4-205ENST00000617074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.85■■■□□ 2.05
HSPA4-205ENST00000617074 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
HSPA4-205ENST00000617074 CCER1Q8TC90 406 aaPredicted RBP27.79■■■□□ 2.04
HSPA4-205ENST00000617074 KIF21BO75037 1637 aa27.76■■■□□ 2.03
HSPA4-205ENST00000617074 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
HSPA4-205ENST00000617074 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
HSPA4-205ENST00000617074 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
HSPA4-205ENST00000617074 CLIP1P30622 1438 aa27.62■■■□□ 2.01
HSPA4-205ENST00000617074 RAPGEF2Q9Y4G8 1499 aa27.61■■■□□ 2.01
HSPA4-205ENST00000617074 BIVM-ERCC5R4GMW8 1640 aa27.57■■■□□ 2
HSPA4-205ENST00000617074 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
HSPA4-205ENST00000617074 RANGAP1P46060 587 aaPredicted RBP27.46■■□□□ 1.99
HSPA4-205ENST00000617074 CUX1P39880 1505 aa27.42■■□□□ 1.98
HSPA4-205ENST00000617074 CFTRP13569 1480 aa27.4■■□□□ 1.98
HSPA4-205ENST00000617074 APLP2Q06481 763 aa27.38■■□□□ 1.97
HSPA4-205ENST00000617074 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
HSPA4-205ENST00000617074 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
HSPA4-205ENST00000617074 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
HSPA4-205ENST00000617074 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
HSPA4-205ENST00000617074 ARAP1Q96P48 1450 aa27.17■■□□□ 1.94
HSPA4-205ENST00000617074 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
HSPA4-205ENST00000617074 DIEXFQ68CQ4 756 aaKnown RBP27.15■■□□□ 1.94
HSPA4-205ENST00000617074 CADPSQ9ULU8 1353 aa27.13■■□□□ 1.93
HSPA4-205ENST00000617074 CUX2O14529 1486 aa27.04■■□□□ 1.92
HSPA4-205ENST00000617074 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
HSPA4-205ENST00000617074 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
HSPA4-205ENST00000617074 ZNF316A6NFI3 1004 aaPredicted RBP27■■□□□ 1.91
HSPA4-205ENST00000617074 IGF1RP08069 1367 aa27■■□□□ 1.91
HSPA4-205ENST00000617074 SCAF1Q9H7N4 1312 aaKnown RBP26.99■■□□□ 1.91
HSPA4-205ENST00000617074 ARHGAP35Q9NRY4 1499 aa26.98■■□□□ 1.91
HSPA4-205ENST00000617074 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
HSPA4-205ENST00000617074 CARMIL1Q5VZK9 1371 aa26.88■■□□□ 1.89
HSPA4-205ENST00000617074 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
HSPA4-205ENST00000617074 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
HSPA4-205ENST00000617074 ACIN1Q9UKV3 1341 aaKnown RBP26.82■■□□□ 1.88
HSPA4-205ENST00000617074 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
HSPA4-205ENST00000617074 DHX57Q6P158 1386 aaKnown RBP26.76■■□□□ 1.87
HSPA4-205ENST00000617074 CLSPNQ9HAW4 1339 aa26.73■■□□□ 1.87
HSPA4-205ENST00000617074 CCNB3Q8WWL7 1395 aa26.73■■□□□ 1.87
HSPA4-205ENST00000617074 CENPBP07199 599 aaPredicted RBP26.72■■□□□ 1.87
HSPA4-205ENST00000617074 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
HSPA4-205ENST00000617074 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.86
HSPA4-205ENST00000617074 NESP48681 1621 aa26.69■■□□□ 1.86
HSPA4-205ENST00000617074 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
HSPA4-205ENST00000617074 TIAM1Q13009 1591 aa26.66■■□□□ 1.86
HSPA4-205ENST00000617074 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
HSPA4-205ENST00000617074 ABCA10Q8WWZ4 1543 aa26.64■■□□□ 1.86
HSPA4-205ENST00000617074 MAP3K1Q13233 1512 aa26.64■■□□□ 1.85
HSPA4-205ENST00000617074 ITGAEP38570 1179 aa26.63■■□□□ 1.85
HSPA4-205ENST00000617074 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms