RNA–Protein interactions for RNA: ENST00000420566.3

KRT17P3-201, Transcript of keratin 17 pseudogene 3, humanhuman

BASIC

Gene KRT17P3, Length 1,262 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT17P3-201ENST00000420566 NISCHQ9Y2I1 1504 aa48.89■■■■■ 5.42
KRT17P3-201ENST00000420566 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
KRT17P3-201ENST00000420566 ABCC9O60706 1549 aa43.1■■■■■ 4.49
KRT17P3-201ENST00000420566 RB1CC1Q8TDY2 1594 aa41.33■■■■■ 4.21
KRT17P3-201ENST00000420566 DCAF8L2P0C7V8 631 aa41.19■■■■■ 4.18
KRT17P3-201ENST00000420566 NACADO15069 1562 aa41.18■■■■■ 4.18
KRT17P3-201ENST00000420566 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
KRT17P3-201ENST00000420566 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
KRT17P3-201ENST00000420566 DCAF1Q9Y4B6 1507 aa40.44■■■■■ 4.06
KRT17P3-201ENST00000420566 UNC13AQ9UPW8 1703 aa40.35■■■■■ 4.05
KRT17P3-201ENST00000420566 PABPN1Q86U42 306 aaKnown RBP eCLIP40.24■■■■■ 4.03
KRT17P3-201ENST00000420566 BICRAQ9NZM4 1560 aa39.98■■■■□ 3.99
KRT17P3-201ENST00000420566 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
KRT17P3-201ENST00000420566 SCRIBQ14160 1630 aa39.79■■■■□ 3.96
KRT17P3-201ENST00000420566 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
KRT17P3-201ENST00000420566 EIF4G1Q04637 1599 aaKnown RBP39.02■■■■□ 3.84
KRT17P3-201ENST00000420566 CC2D2AQ9P2K1 1620 aa38.97■■■■□ 3.83
KRT17P3-201ENST00000420566 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
KRT17P3-201ENST00000420566 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
KRT17P3-201ENST00000420566 NCAPD3P42695 1498 aa37.97■■■■□ 3.67
KRT17P3-201ENST00000420566 BAZ1AQ9NRL2 1556 aaPredicted RBP37.96■■■■□ 3.67
KRT17P3-201ENST00000420566 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
KRT17P3-201ENST00000420566 SMARCA2P51531 1590 aa37.9■■■■□ 3.66
KRT17P3-201ENST00000420566 HMGXB3Q12766 1538 aa37.73■■■■□ 3.63
KRT17P3-201ENST00000420566 MROH2BQ7Z745 1585 aa37.64■■■■□ 3.62
KRT17P3-201ENST00000420566 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
KRT17P3-201ENST00000420566 BAZ1BQ9UIG0 1483 aaKnown RBP37.63■■■■□ 3.61
KRT17P3-201ENST00000420566 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
KRT17P3-201ENST00000420566 WIZO95785 1651 aa37.25■■■■□ 3.55
KRT17P3-201ENST00000420566 NESP48681 1621 aa37.14■■■■□ 3.54
KRT17P3-201ENST00000420566 RSF1Q96T23 1441 aaPredicted RBP37.09■■■■□ 3.53
KRT17P3-201ENST00000420566 LAMC3Q9Y6N6 1575 aa37.07■■■■□ 3.52
KRT17P3-201ENST00000420566 CUX2O14529 1486 aa36.96■■■■□ 3.51
KRT17P3-201ENST00000420566 PDS5BQ9NTI5 1447 aa36.87■■■■□ 3.49
KRT17P3-201ENST00000420566 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
KRT17P3-201ENST00000420566 TOP2AP11388 1531 aaKnown RBP36.83■■■■□ 3.49
KRT17P3-201ENST00000420566 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
KRT17P3-201ENST00000420566 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
KRT17P3-201ENST00000420566 CFTRP13569 1480 aa36.53■■■■□ 3.44
KRT17P3-201ENST00000420566 MRC2Q9UBG0 1479 aa36.45■■■■□ 3.43
KRT17P3-201ENST00000420566 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
KRT17P3-201ENST00000420566 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
KRT17P3-201ENST00000420566 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
KRT17P3-201ENST00000420566 DNAJC5Q9H3Z4 198 aa36.33■■■■□ 3.41
KRT17P3-201ENST00000420566 WDR62O43379 1518 aa36.31■■■■□ 3.4
KRT17P3-201ENST00000420566 PRDM2Q13029 1718 aa36.28■■■■□ 3.4
KRT17P3-201ENST00000420566 URB2Q14146 1524 aaKnown RBP36.04■■■■□ 3.36
KRT17P3-201ENST00000420566 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
KRT17P3-201ENST00000420566 ABCC8Q09428 1581 aa35.86■■■■□ 3.33
KRT17P3-201ENST00000420566 TOPBP1Q92547 1522 aa35.79■■■■□ 3.32
KRT17P3-201ENST00000420566 DNMBPQ6XZF7 1577 aa35.72■■■■□ 3.31
KRT17P3-201ENST00000420566 IFT140Q96RY7 1462 aa35.69■■■■□ 3.3
KRT17P3-201ENST00000420566 ZNF608Q9ULD9 1512 aaPredicted RBP35.5■■■■□ 3.27
KRT17P3-201ENST00000420566 OSCARQ8IYS5 282 aa35.45■■■■□ 3.27
KRT17P3-201ENST00000420566 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
KRT17P3-201ENST00000420566 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
KRT17P3-201ENST00000420566 SOGA1O94964 1423 aa35.37■■■■□ 3.25
KRT17P3-201ENST00000420566 EIF4G3O43432 1585 aaKnown RBP35.36■■■■□ 3.25
KRT17P3-201ENST00000420566 CUX1P39880 1505 aa35.34■■■■□ 3.25
KRT17P3-201ENST00000420566 FGD5Q6ZNL6 1462 aa35.31■■■■□ 3.24
KRT17P3-201ENST00000420566 AQRO60306 1485 aaKnown RBP eCLIP35.3■■■■□ 3.24
KRT17P3-201ENST00000420566 RAD54L2Q9Y4B4 1467 aa35.3■■■■□ 3.24
KRT17P3-201ENST00000420566 TDRD9Q8NDG6 1382 aaKnown RBP35.18■■■■□ 3.22
KRT17P3-201ENST00000420566 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
KRT17P3-201ENST00000420566 FBLN2P98095 1184 aa35.08■■■■□ 3.21
KRT17P3-201ENST00000420566 WRNQ14191 1432 aaPredicted RBP eCLIP35.03■■■■□ 3.2
KRT17P3-201ENST00000420566 CHD1O14646 1710 aa35.03■■■■□ 3.2
KRT17P3-201ENST00000420566 TRIM41Q8WV44 630 aa35■■■■□ 3.19
KRT17P3-201ENST00000420566 GRIN2BQ13224 1484 aa34.98■■■■□ 3.19
KRT17P3-201ENST00000420566 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
KRT17P3-201ENST00000420566 BIVM-ERCC5R4GMW8 1640 aa34.96■■■■□ 3.19
KRT17P3-201ENST00000420566 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
KRT17P3-201ENST00000420566 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
KRT17P3-201ENST00000420566 GAPVD1Q14C86 1478 aa34.93■■■■□ 3.18
KRT17P3-201ENST00000420566 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
KRT17P3-201ENST00000420566 CHMP7Q8WUX9 453 aaPredicted RBP34.91■■■■□ 3.18
KRT17P3-201ENST00000420566 SYNJ1O43426 1573 aa34.89■■■■□ 3.18
KRT17P3-201ENST00000420566 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
KRT17P3-201ENST00000420566 ABCA5Q8WWZ7 1642 aa34.82■■■■□ 3.16
KRT17P3-201ENST00000420566 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
KRT17P3-201ENST00000420566 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
KRT17P3-201ENST00000420566 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
KRT17P3-201ENST00000420566 SYNJ2O15056 1496 aa34.79■■■■□ 3.16
KRT17P3-201ENST00000420566 ARHGEF11O15085 1522 aa34.76■■■■□ 3.15
KRT17P3-201ENST00000420566 CLASP1Q7Z460 1538 aa34.59■■■■□ 3.13
KRT17P3-201ENST00000420566 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
KRT17P3-201ENST00000420566 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
KRT17P3-201ENST00000420566 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
KRT17P3-201ENST00000420566 FHAD1B1AJZ9 1412 aa34.51■■■■□ 3.12
KRT17P3-201ENST00000420566 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
KRT17P3-201ENST00000420566 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
KRT17P3-201ENST00000420566 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
KRT17P3-201ENST00000420566 NUP160Q12769 1436 aa34.34■■■■□ 3.09
KRT17P3-201ENST00000420566 CEP170Q5SW79 1584 aa34.32■■■■□ 3.08
KRT17P3-201ENST00000420566 IGF1RP08069 1367 aa34.23■■■■□ 3.07
KRT17P3-201ENST00000420566 CUL7Q14999 1698 aa34.19■■■■□ 3.06
KRT17P3-201ENST00000420566 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
KRT17P3-201ENST00000420566 JPH4Q96JJ6 628 aa34.09■■■■□ 3.05
KRT17P3-201ENST00000420566 TRHP20396 242 aaPredicted RBP34.06■■■■□ 3.04
KRT17P3-201ENST00000420566 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms