RNA–Protein interactions for RNA: ENST00000271227.10

SLC44A3-201, Transcript of solute carrier family 44 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A3, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3-201ENST00000271227 NISCHQ9Y2I1 1504 aa39.08■■■■□ 3.85
SLC44A3-201ENST00000271227 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
SLC44A3-201ENST00000271227 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
SLC44A3-201ENST00000271227 SHROOM4Q9ULL8 1493 aa32.83■■■□□ 2.85
SLC44A3-201ENST00000271227 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.78
SLC44A3-201ENST00000271227 DCAF1Q9Y4B6 1507 aa32.13■■■□□ 2.73
SLC44A3-201ENST00000271227 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
SLC44A3-201ENST00000271227 MYO15BQ96JP2 1530 aa31.41■■■□□ 2.62
SLC44A3-201ENST00000271227 ABCC9O60706 1549 aa31.37■■■□□ 2.61
SLC44A3-201ENST00000271227 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
SLC44A3-201ENST00000271227 NACADO15069 1562 aa31.09■■■□□ 2.57
SLC44A3-201ENST00000271227 CHIC1Q5VXU3 224 aa30.88■■■□□ 2.53
SLC44A3-201ENST00000271227 RSF1Q96T23 1441 aaPredicted RBP30.71■■■□□ 2.51
SLC44A3-201ENST00000271227 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
SLC44A3-201ENST00000271227 CECR2Q9BXF3 1484 aa30.46■■■□□ 2.47
SLC44A3-201ENST00000271227 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
SLC44A3-201ENST00000271227 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
SLC44A3-201ENST00000271227 WIZO95785 1651 aa30.1■■■□□ 2.41
SLC44A3-201ENST00000271227 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
SLC44A3-201ENST00000271227 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
SLC44A3-201ENST00000271227 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.37
SLC44A3-201ENST00000271227 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
SLC44A3-201ENST00000271227 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
SLC44A3-201ENST00000271227 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
SLC44A3-201ENST00000271227 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
SLC44A3-201ENST00000271227 FAM9AQ8IZU1 332 aaPredicted RBP29.54■■■□□ 2.32
SLC44A3-201ENST00000271227 CCDC88BA6NC98 1476 aa29.53■■■□□ 2.32
SLC44A3-201ENST00000271227 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
SLC44A3-201ENST00000271227 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
SLC44A3-201ENST00000271227 PCGF6Q9BYE7 350 aa29.36■■■□□ 2.29
SLC44A3-201ENST00000271227 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
SLC44A3-201ENST00000271227 EHMT2Q96KQ7 1210 aa29.25■■■□□ 2.27
SLC44A3-201ENST00000271227 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
SLC44A3-201ENST00000271227 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
SLC44A3-201ENST00000271227 BAZ1BQ9UIG0 1483 aaKnown RBP29.12■■■□□ 2.25
SLC44A3-201ENST00000271227 HRCP23327 699 aa29.03■■■□□ 2.24
SLC44A3-201ENST00000271227 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
SLC44A3-201ENST00000271227 SOGA1O94964 1423 aa28.89■■■□□ 2.21
SLC44A3-201ENST00000271227 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
SLC44A3-201ENST00000271227 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
SLC44A3-201ENST00000271227 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
SLC44A3-201ENST00000271227 EEA1Q15075 1411 aa28.73■■■□□ 2.19
SLC44A3-201ENST00000271227 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
SLC44A3-201ENST00000271227 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
SLC44A3-201ENST00000271227 CSRNP3Q8WYN3 585 aa28.71■■■□□ 2.19
SLC44A3-201ENST00000271227 TNIKQ9UKE5 1360 aa28.55■■■□□ 2.16
SLC44A3-201ENST00000271227 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
SLC44A3-201ENST00000271227 CEP162Q5TB80 1403 aa28.54■■■□□ 2.16
SLC44A3-201ENST00000271227 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
SLC44A3-201ENST00000271227 GOLGA3Q08378 1498 aa28.48■■■□□ 2.15
SLC44A3-201ENST00000271227 TOP2BQ02880 1626 aa28.44■■■□□ 2.14
SLC44A3-201ENST00000271227 CFTRP13569 1480 aa28.39■■■□□ 2.14
SLC44A3-201ENST00000271227 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
SLC44A3-201ENST00000271227 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
SLC44A3-201ENST00000271227 KIF21BO75037 1637 aa28.33■■■□□ 2.13
SLC44A3-201ENST00000271227 CC2D2AQ9P2K1 1620 aa28.27■■■□□ 2.12
SLC44A3-201ENST00000271227 CUX1P39880 1505 aa28.27■■■□□ 2.12
SLC44A3-201ENST00000271227 RAPGEF2Q9Y4G8 1499 aa28.22■■■□□ 2.11
SLC44A3-201ENST00000271227 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
SLC44A3-201ENST00000271227 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
SLC44A3-201ENST00000271227 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
SLC44A3-201ENST00000271227 CLIP1P30622 1438 aa28.13■■■□□ 2.09
SLC44A3-201ENST00000271227 PRDM2Q13029 1718 aa28.07■■■□□ 2.08
SLC44A3-201ENST00000271227 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
SLC44A3-201ENST00000271227 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
SLC44A3-201ENST00000271227 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
SLC44A3-201ENST00000271227 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
SLC44A3-201ENST00000271227 VPS8Q8N3P4 1428 aa27.95■■■□□ 2.06
SLC44A3-201ENST00000271227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
SLC44A3-201ENST00000271227 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
SLC44A3-201ENST00000271227 CUX2O14529 1486 aa27.86■■■□□ 2.05
SLC44A3-201ENST00000271227 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
SLC44A3-201ENST00000271227 CCER1Q8TC90 406 aaPredicted RBP27.8■■■□□ 2.04
SLC44A3-201ENST00000271227 NESP48681 1621 aa27.8■■■□□ 2.04
SLC44A3-201ENST00000271227 APLP2Q06481 763 aa27.8■■■□□ 2.04
SLC44A3-201ENST00000271227 IGF1RP08069 1367 aa27.77■■■□□ 2.04
SLC44A3-201ENST00000271227 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
SLC44A3-201ENST00000271227 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
SLC44A3-201ENST00000271227 CARMIL1Q5VZK9 1371 aa27.65■■■□□ 2.02
SLC44A3-201ENST00000271227 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
SLC44A3-201ENST00000271227 TOPBP1Q92547 1522 aa27.64■■■□□ 2.02
SLC44A3-201ENST00000271227 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
SLC44A3-201ENST00000271227 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
SLC44A3-201ENST00000271227 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
SLC44A3-201ENST00000271227 ARHGAP35Q9NRY4 1499 aa27.58■■■□□ 2.01
SLC44A3-201ENST00000271227 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
SLC44A3-201ENST00000271227 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
SLC44A3-201ENST00000271227 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
SLC44A3-201ENST00000271227 KANK4Q5T7N3 995 aaPredicted RBP27.48■■□□□ 1.99
SLC44A3-201ENST00000271227 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
SLC44A3-201ENST00000271227 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
SLC44A3-201ENST00000271227 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
SLC44A3-201ENST00000271227 CUL7Q14999 1698 aa27.29■■□□□ 1.96
SLC44A3-201ENST00000271227 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
SLC44A3-201ENST00000271227 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
SLC44A3-201ENST00000271227 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
SLC44A3-201ENST00000271227 RRBP1Q9P2E9 1410 aaKnown RBP27.22■■□□□ 1.95
SLC44A3-201ENST00000271227 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
SLC44A3-201ENST00000271227 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
SLC44A3-201ENST00000271227 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms