RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
SCFD2-204ENST00000611795 CCDC180Q9P1Z9 1646 aa39.63■■■■□ 3.93
SCFD2-204ENST00000611795 ABCC9O60706 1549 aa38.1■■■■□ 3.69
SCFD2-204ENST00000611795 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
SCFD2-204ENST00000611795 DCAF1Q9Y4B6 1507 aa37.23■■■■□ 3.55
SCFD2-204ENST00000611795 DCAF8L2P0C7V8 631 aa37.2■■■■□ 3.55
SCFD2-204ENST00000611795 MYO15BQ96JP2 1530 aa37.09■■■■□ 3.53
SCFD2-204ENST00000611795 NACADO15069 1562 aa37.06■■■■□ 3.52
SCFD2-204ENST00000611795 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
SCFD2-204ENST00000611795 SCRIBQ14160 1630 aa36.27■■■■□ 3.4
SCFD2-204ENST00000611795 UNC13AQ9UPW8 1703 aa36.19■■■■□ 3.38
SCFD2-204ENST00000611795 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
SCFD2-204ENST00000611795 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
SCFD2-204ENST00000611795 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
SCFD2-204ENST00000611795 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
SCFD2-204ENST00000611795 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
SCFD2-204ENST00000611795 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
SCFD2-204ENST00000611795 SMARCA4P51532 1647 aa34.75■■■■□ 3.15
SCFD2-204ENST00000611795 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
SCFD2-204ENST00000611795 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
SCFD2-204ENST00000611795 CC2D2AQ9P2K1 1620 aa34.5■■■■□ 3.11
SCFD2-204ENST00000611795 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
SCFD2-204ENST00000611795 WIZO95785 1651 aa34.39■■■■□ 3.1
SCFD2-204ENST00000611795 ATAD2BQ9ULI0 1458 aa34.37■■■■□ 3.09
SCFD2-204ENST00000611795 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
SCFD2-204ENST00000611795 SMARCA2P51531 1590 aa34.31■■■■□ 3.08
SCFD2-204ENST00000611795 NCAPD3P42695 1498 aa34.22■■■■□ 3.07
SCFD2-204ENST00000611795 SUPT5HO00267 1087 aaKnown RBP34.22■■■■□ 3.07
SCFD2-204ENST00000611795 HMGXB3Q12766 1538 aa34.11■■■■□ 3.05
SCFD2-204ENST00000611795 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
SCFD2-204ENST00000611795 TOP2AP11388 1531 aaKnown RBP34.03■■■■□ 3.04
SCFD2-204ENST00000611795 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
SCFD2-204ENST00000611795 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
SCFD2-204ENST00000611795 NESP48681 1621 aa33.24■■■□□ 2.91
SCFD2-204ENST00000611795 CFTRP13569 1480 aa33.23■■■□□ 2.91
SCFD2-204ENST00000611795 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
SCFD2-204ENST00000611795 PRDM2Q13029 1718 aa33.04■■■□□ 2.88
SCFD2-204ENST00000611795 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
SCFD2-204ENST00000611795 FANCD2Q9BXW9 1451 aa32.88■■■□□ 2.85
SCFD2-204ENST00000611795 KIF21AQ7Z4S6 1674 aa32.84■■■□□ 2.85
SCFD2-204ENST00000611795 CEP164Q9UPV0 1460 aa32.75■■■□□ 2.83
SCFD2-204ENST00000611795 ERCC6Q03468 1493 aa32.7■■■□□ 2.82
SCFD2-204ENST00000611795 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
SCFD2-204ENST00000611795 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
SCFD2-204ENST00000611795 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
SCFD2-204ENST00000611795 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
SCFD2-204ENST00000611795 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
SCFD2-204ENST00000611795 CUX1P39880 1505 aa32.53■■■□□ 2.8
SCFD2-204ENST00000611795 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
SCFD2-204ENST00000611795 DNMBPQ6XZF7 1577 aa32.47■■■□□ 2.79
SCFD2-204ENST00000611795 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
SCFD2-204ENST00000611795 WDR62O43379 1518 aa32.45■■■□□ 2.78
SCFD2-204ENST00000611795 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
SCFD2-204ENST00000611795 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
SCFD2-204ENST00000611795 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
SCFD2-204ENST00000611795 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
SCFD2-204ENST00000611795 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
SCFD2-204ENST00000611795 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
SCFD2-204ENST00000611795 CUX2O14529 1486 aa32.17■■■□□ 2.74
SCFD2-204ENST00000611795 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
SCFD2-204ENST00000611795 SOGA1O94964 1423 aa32.08■■■□□ 2.73
SCFD2-204ENST00000611795 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
SCFD2-204ENST00000611795 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
SCFD2-204ENST00000611795 WDR97A6NE52 1622 aa32■■■□□ 2.71
SCFD2-204ENST00000611795 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
SCFD2-204ENST00000611795 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
SCFD2-204ENST00000611795 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
SCFD2-204ENST00000611795 RUSC2Q8N2Y8 1516 aa31.83■■■□□ 2.69
SCFD2-204ENST00000611795 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.68
SCFD2-204ENST00000611795 AQRO60306 1485 aaKnown RBP eCLIP31.78■■■□□ 2.68
SCFD2-204ENST00000611795 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
SCFD2-204ENST00000611795 KIF27Q86VH2 1401 aa31.76■■■□□ 2.68
SCFD2-204ENST00000611795 GAPVD1Q14C86 1478 aa31.73■■■□□ 2.67
SCFD2-204ENST00000611795 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
SCFD2-204ENST00000611795 EEA1Q15075 1411 aa31.64■■■□□ 2.66
SCFD2-204ENST00000611795 FAM9AQ8IZU1 332 aaPredicted RBP31.61■■■□□ 2.65
SCFD2-204ENST00000611795 GRIN2BQ13224 1484 aa31.61■■■□□ 2.65
SCFD2-204ENST00000611795 IGF1RP08069 1367 aa31.6■■■□□ 2.65
SCFD2-204ENST00000611795 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
SCFD2-204ENST00000611795 CSRNP3Q8WYN3 585 aa31.51■■■□□ 2.64
SCFD2-204ENST00000611795 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
SCFD2-204ENST00000611795 ADAMTS12P58397 1594 aa31.45■■■□□ 2.62
SCFD2-204ENST00000611795 MAGI1Q96QZ7 1491 aaPredicted RBP31.44■■■□□ 2.62
SCFD2-204ENST00000611795 CUL7Q14999 1698 aa31.44■■■□□ 2.62
SCFD2-204ENST00000611795 PRXQ9BXM0 1461 aa31.42■■■□□ 2.62
SCFD2-204ENST00000611795 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
SCFD2-204ENST00000611795 FHAD1B1AJZ9 1412 aa31.38■■■□□ 2.61
SCFD2-204ENST00000611795 KIF21BO75037 1637 aa31.33■■■□□ 2.61
SCFD2-204ENST00000611795 SYNJ2O15056 1496 aa31.32■■■□□ 2.6
SCFD2-204ENST00000611795 RAPGEF2Q9Y4G8 1499 aa31.29■■■□□ 2.6
SCFD2-204ENST00000611795 CHD1O14646 1710 aa31.24■■■□□ 2.59
SCFD2-204ENST00000611795 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
SCFD2-204ENST00000611795 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.58
SCFD2-204ENST00000611795 FBLN2P98095 1184 aa31.17■■■□□ 2.58
SCFD2-204ENST00000611795 GOLGA3Q08378 1498 aa31.17■■■□□ 2.58
SCFD2-204ENST00000611795 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
SCFD2-204ENST00000611795 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
SCFD2-204ENST00000611795 CEP170Q5SW79 1584 aa31.08■■■□□ 2.57
SCFD2-204ENST00000611795 NUP160Q12769 1436 aa31.07■■■□□ 2.56
SCFD2-204ENST00000611795 CTTNBP2Q8WZ74 1663 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms