RNA–Protein interactions for RNA: ENST00000442597.5

NME6-209, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME6, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-209ENST00000442597 NISCHQ9Y2I1 1504 aa46.4■■■■■ 5.02
NME6-209ENST00000442597 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
NME6-209ENST00000442597 ABCC9O60706 1549 aa39.94■■■■□ 3.98
NME6-209ENST00000442597 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
NME6-209ENST00000442597 NACADO15069 1562 aa38.63■■■■□ 3.77
NME6-209ENST00000442597 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
NME6-209ENST00000442597 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
NME6-209ENST00000442597 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
NME6-209ENST00000442597 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
NME6-209ENST00000442597 UNC13AQ9UPW8 1703 aa37.83■■■■□ 3.65
NME6-209ENST00000442597 SCRIBQ14160 1630 aa37.67■■■■□ 3.62
NME6-209ENST00000442597 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.57
NME6-209ENST00000442597 PABPN1Q86U42 306 aaKnown RBP eCLIP37.28■■■■□ 3.56
NME6-209ENST00000442597 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
NME6-209ENST00000442597 SHROOM4Q9ULL8 1493 aa37.08■■■■□ 3.53
NME6-209ENST00000442597 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
NME6-209ENST00000442597 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
NME6-209ENST00000442597 CECR2Q9BXF3 1484 aa36.06■■■■□ 3.36
NME6-209ENST00000442597 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
NME6-209ENST00000442597 BAZ1AQ9NRL2 1556 aaPredicted RBP36.02■■■■□ 3.36
NME6-209ENST00000442597 MROH2BQ7Z745 1585 aa35.76■■■■□ 3.32
NME6-209ENST00000442597 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
NME6-209ENST00000442597 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
NME6-209ENST00000442597 PEG3Q9GZU2 1588 aa35.62■■■■□ 3.29
NME6-209ENST00000442597 NCAPD3P42695 1498 aa35.54■■■■□ 3.28
NME6-209ENST00000442597 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
NME6-209ENST00000442597 WIZO95785 1651 aa35.46■■■■□ 3.27
NME6-209ENST00000442597 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
NME6-209ENST00000442597 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
NME6-209ENST00000442597 TOP2AP11388 1531 aaKnown RBP35.12■■■■□ 3.21
NME6-209ENST00000442597 SUPT5HO00267 1087 aaKnown RBP34.77■■■■□ 3.16
NME6-209ENST00000442597 LAMC3Q9Y6N6 1575 aa34.67■■■■□ 3.14
NME6-209ENST00000442597 NESP48681 1621 aa34.64■■■■□ 3.14
NME6-209ENST00000442597 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
NME6-209ENST00000442597 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
NME6-209ENST00000442597 CADPSQ9ULU8 1353 aa34.52■■■■□ 3.12
NME6-209ENST00000442597 ERCC6Q03468 1493 aa34.47■■■■□ 3.11
NME6-209ENST00000442597 PRDM2Q13029 1718 aa34.43■■■■□ 3.1
NME6-209ENST00000442597 CFTRP13569 1480 aa34.41■■■■□ 3.1
NME6-209ENST00000442597 KIF21AQ7Z4S6 1674 aa34.38■■■■□ 3.09
NME6-209ENST00000442597 PDS5BQ9NTI5 1447 aa34.37■■■■□ 3.09
NME6-209ENST00000442597 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
NME6-209ENST00000442597 CEP164Q9UPV0 1460 aa34.18■■■■□ 3.06
NME6-209ENST00000442597 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
NME6-209ENST00000442597 CUX2O14529 1486 aa34.07■■■■□ 3.05
NME6-209ENST00000442597 MRC2Q9UBG0 1479 aa34.05■■■■□ 3.04
NME6-209ENST00000442597 WDR62O43379 1518 aa33.94■■■■□ 3.02
NME6-209ENST00000442597 URB2Q14146 1524 aaKnown RBP33.83■■■■□ 3.01
NME6-209ENST00000442597 DNMBPQ6XZF7 1577 aa33.74■■■□□ 2.99
NME6-209ENST00000442597 TOPBP1Q92547 1522 aa33.7■■■□□ 2.99
NME6-209ENST00000442597 ABCC8Q09428 1581 aa33.7■■■□□ 2.99
NME6-209ENST00000442597 CUX1P39880 1505 aa33.57■■■□□ 2.96
NME6-209ENST00000442597 WRNQ14191 1432 aaPredicted RBP eCLIP33.46■■■□□ 2.95
NME6-209ENST00000442597 POLA1P09884 1462 aaPredicted RBP33.43■■■□□ 2.94
NME6-209ENST00000442597 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
NME6-209ENST00000442597 FGD5Q6ZNL6 1462 aa33.42■■■□□ 2.94
NME6-209ENST00000442597 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
NME6-209ENST00000442597 SYNJ1O43426 1573 aa33.41■■■□□ 2.94
NME6-209ENST00000442597 TOP2BQ02880 1626 aa33.4■■■□□ 2.94
NME6-209ENST00000442597 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
NME6-209ENST00000442597 SOGA1O94964 1423 aa33.25■■■□□ 2.91
NME6-209ENST00000442597 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
NME6-209ENST00000442597 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
NME6-209ENST00000442597 WDR97A6NE52 1622 aa33.21■■■□□ 2.91
NME6-209ENST00000442597 ZNF608Q9ULD9 1512 aaPredicted RBP33.19■■■□□ 2.9
NME6-209ENST00000442597 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
NME6-209ENST00000442597 ABCA10Q8WWZ4 1543 aa33.08■■■□□ 2.89
NME6-209ENST00000442597 AQRO60306 1485 aaKnown RBP eCLIP33.01■■■□□ 2.882e-6■■■□□ 18.3
NME6-209ENST00000442597 TDRD9Q8NDG6 1382 aaKnown RBP33■■■□□ 2.87
NME6-209ENST00000442597 ABCA5Q8WWZ7 1642 aa33■■■□□ 2.87
NME6-209ENST00000442597 PBRM1Q86U86 1689 aa32.98■■■□□ 2.87
NME6-209ENST00000442597 GAPVD1Q14C86 1478 aa32.92■■■□□ 2.86
NME6-209ENST00000442597 GRIN2BQ13224 1484 aa32.87■■■□□ 2.85
NME6-209ENST00000442597 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
NME6-209ENST00000442597 MAGI1Q96QZ7 1491 aaPredicted RBP32.79■■■□□ 2.84
NME6-209ENST00000442597 CHD1O14646 1710 aa32.77■■■□□ 2.84
NME6-209ENST00000442597 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
NME6-209ENST00000442597 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
NME6-209ENST00000442597 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
NME6-209ENST00000442597 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
NME6-209ENST00000442597 CUL7Q14999 1698 aa32.59■■■□□ 2.81
NME6-209ENST00000442597 FBLN2P98095 1184 aa32.57■■■□□ 2.8
NME6-209ENST00000442597 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
NME6-209ENST00000442597 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
NME6-209ENST00000442597 OSCARQ8IYS5 282 aa32.52■■■□□ 2.8
NME6-209ENST00000442597 CHMP7Q8WUX9 453 aaPredicted RBP32.51■■■□□ 2.79
NME6-209ENST00000442597 GRIN2AQ12879 1464 aa32.47■■■□□ 2.79
NME6-209ENST00000442597 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
NME6-209ENST00000442597 IGF1RP08069 1367 aa32.45■■■□□ 2.78
NME6-209ENST00000442597 EEA1Q15075 1411 aa32.34■■■□□ 2.77
NME6-209ENST00000442597 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
NME6-209ENST00000442597 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.76
NME6-209ENST00000442597 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
NME6-209ENST00000442597 NUP160Q12769 1436 aa32.26■■■□□ 2.76
NME6-209ENST00000442597 RAPGEF2Q9Y4G8 1499 aa32.23■■■□□ 2.75
NME6-209ENST00000442597 PRXQ9BXM0 1461 aa32.15■■■□□ 2.74
NME6-209ENST00000442597 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
NME6-209ENST00000442597 RIMBP3CA6NJZ7 1639 aa32.12■■■□□ 2.73
NME6-209ENST00000442597 RIMBP3BA6NNM3 1639 aa32.12■■■□□ 2.73
NME6-209ENST00000442597 RIMBP3Q9UFD9 1639 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms