RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
HCG11-201ENST00000411553 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
HCG11-201ENST00000411553 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
HCG11-201ENST00000411553 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
HCG11-201ENST00000411553 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
HCG11-201ENST00000411553 PELP1Q8IZL8 1130 aaKnown RBP29.05■■■□□ 2.24
HCG11-201ENST00000411553 APLP2Q06481 763 aa28.99■■■□□ 2.23
HCG11-201ENST00000411553 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
HCG11-201ENST00000411553 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
HCG11-201ENST00000411553 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
HCG11-201ENST00000411553 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
HCG11-201ENST00000411553 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
HCG11-201ENST00000411553 ERICH6Q7L0X2 663 aa27.85■■■□□ 2.05
HCG11-201ENST00000411553 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
HCG11-201ENST00000411553 CENPBP07199 599 aaPredicted RBP27.78■■■□□ 2.04
HCG11-201ENST00000411553 CCER1Q8TC90 406 aaPredicted RBP27.78■■■□□ 2.04
HCG11-201ENST00000411553 ZEB1P37275 1124 aaPredicted RBP27.72■■■□□ 2.03
HCG11-201ENST00000411553 UBTFP17480 764 aaKnown RBP27.67■■■□□ 2.02
HCG11-201ENST00000411553 NEFLP07196 543 aa27.4■■□□□ 1.98
HCG11-201ENST00000411553 YTHDC1Q96MU7 727 aaKnown RBP27.18■■□□□ 1.94
HCG11-201ENST00000411553 MYT1LQ9UL68 1186 aa27.1■■□□□ 1.93
HCG11-201ENST00000411553 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
HCG11-201ENST00000411553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
HCG11-201ENST00000411553 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
HCG11-201ENST00000411553 ITGAEP38570 1179 aa26.85■■□□□ 1.89
HCG11-201ENST00000411553 POLR3GLQ9BT43 218 aa26.85■■□□□ 1.89
HCG11-201ENST00000411553 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
HCG11-201ENST00000411553 DAXXQ9UER7 740 aaPredicted RBP26.75■■□□□ 1.87
HCG11-201ENST00000411553 MYT1Q01538 1121 aa26.55■■□□□ 1.84
HCG11-201ENST00000411553 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
HCG11-201ENST00000411553 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
HCG11-201ENST00000411553 SLC4A1APQ9BWU0 796 aaKnown RBP26.48■■□□□ 1.83
HCG11-201ENST00000411553 HRCP23327 699 aa26.4■■□□□ 1.82
HCG11-201ENST00000411553 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
HCG11-201ENST00000411553 CLSPNQ9HAW4 1339 aa26.16■■□□□ 1.78
HCG11-201ENST00000411553 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
HCG11-201ENST00000411553 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
HCG11-201ENST00000411553 ZNF316A6NFI3 1004 aaPredicted RBP26.08■■□□□ 1.77
HCG11-201ENST00000411553 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.75
HCG11-201ENST00000411553 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
HCG11-201ENST00000411553 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
HCG11-201ENST00000411553 NEUROD1Q13562 356 aa25.89■■□□□ 1.74
HCG11-201ENST00000411553 ZNF326Q5BKZ1 582 aaKnown RBP25.81■■□□□ 1.72
HCG11-201ENST00000411553 FBLN2P98095 1184 aa25.79■■□□□ 1.72
HCG11-201ENST00000411553 ZBTB47Q9UFB7 747 aaPredicted RBP25.77■■□□□ 1.72
HCG11-201ENST00000411553 ABCC9O60706 1549 aa25.75■■□□□ 1.71
HCG11-201ENST00000411553 ANP32CO43423 234 aa25.67■■□□□ 1.7
HCG11-201ENST00000411553 SLC24A1O60721 1099 aa25.63■■□□□ 1.69
HCG11-201ENST00000411553 BCANQ96GW7 911 aa25.61■■□□□ 1.69
HCG11-201ENST00000411553 NEFMP07197 916 aa25.56■■□□□ 1.68
HCG11-201ENST00000411553 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
HCG11-201ENST00000411553 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
HCG11-201ENST00000411553 BCL11AQ9H165 835 aa25.46■■□□□ 1.67
HCG11-201ENST00000411553 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
HCG11-201ENST00000411553 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
HCG11-201ENST00000411553 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
HCG11-201ENST00000411553 ESF1Q9H501 851 aaKnown RBP25.3■■□□□ 1.64
HCG11-201ENST00000411553 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
HCG11-201ENST00000411553 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
HCG11-201ENST00000411553 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
HCG11-201ENST00000411553 CHGAP10645 457 aaKnown RBP25.11■■□□□ 1.61
HCG11-201ENST00000411553 ANP32AP39687 249 aaKnown RBP25.08■■□□□ 1.61
HCG11-201ENST00000411553 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
HCG11-201ENST00000411553 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
HCG11-201ENST00000411553 TONSLQ96HA7 1378 aa24.97■■□□□ 1.59
HCG11-201ENST00000411553 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
HCG11-201ENST00000411553 HSP90AA1P07900 732 aaKnown RBP24.89■■□□□ 1.58
HCG11-201ENST00000411553 ANP32BQ92688 251 aaKnown RBP24.85■■□□□ 1.57
HCG11-201ENST00000411553 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
HCG11-201ENST00000411553 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
HCG11-201ENST00000411553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
HCG11-201ENST00000411553 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
HCG11-201ENST00000411553 FAM9BQ8IZU0 186 aa24.78■■□□□ 1.56
HCG11-201ENST00000411553 FKBP8Q14318 412 aa24.75■■□□□ 1.55
HCG11-201ENST00000411553 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
HCG11-201ENST00000411553 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
HCG11-201ENST00000411553 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
HCG11-201ENST00000411553 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
HCG11-201ENST00000411553 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 TMC1Q8TDI8 760 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.67■■□□□ 1.54
HCG11-201ENST00000411553 WDR43Q15061 677 aaKnown RBP eCLIP24.66■■□□□ 1.54
HCG11-201ENST00000411553 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
HCG11-201ENST00000411553 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
HCG11-201ENST00000411553 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
HCG11-201ENST00000411553 CCDC136Q96JN2 1154 aa24.55■■□□□ 1.52
HCG11-201ENST00000411553 MTUS2Q5JR59 1369 aa24.54■■□□□ 1.52
HCG11-201ENST00000411553 A0A0G2JS52 829 aa24.52■■□□□ 1.52
HCG11-201ENST00000411553 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
HCG11-201ENST00000411553 MYH16Q9H6N6 1097 aa24.48■■□□□ 1.51
HCG11-201ENST00000411553 EIF5BO60841 1220 aaKnown RBP24.44■■□□□ 1.5
HCG11-201ENST00000411553 ZBTB7CA1YPR0 619 aa24.44■■□□□ 1.5
HCG11-201ENST00000411553 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
HCG11-201ENST00000411553 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
HCG11-201ENST00000411553 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
HCG11-201ENST00000411553 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
HCG11-201ENST00000411553 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
HCG11-201ENST00000411553 EIF4G2P78344 907 aaKnown RBP eCLIP24.33■■□□□ 1.48
HCG11-201ENST00000411553 RRP7BPQ9NSQ0 103 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms