Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC023632.3-201ENST00000521633 145 ntBASIC14.81□□□□□ -0.04
IFNA1P01562 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.81□□□□□ -0.04
IFNA1P01562 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IFNA1P01562 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.81□□□□□ -0.04
IFNA1P01562 SDHAP1-207ENST00000440850 2000 ntBASIC14.81□□□□□ -0.04
IFNA1P01562 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.81□□□□□ -0.04
IFNA1P01562 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.81□□□□□ -0.04
IFNA1P01562 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.81□□□□□ -0.04
IFNA1P01562 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.81□□□□□ -0.04
IFNA1P01562 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IFNA1P01562 AC116351.2-201ENST00000606540 1585 ntBASIC14.81□□□□□ -0.04
IFNA1P01562 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.8□□□□□ -0.04
IFNA1P01562 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.8□□□□□ -0.04
IFNA1P01562 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.8□□□□□ -0.04
IFNA1P01562 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.8□□□□□ -0.04
IFNA1P01562 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IFNA1P01562 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.8□□□□□ -0.04
IFNA1P01562 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 AC024257.2-201ENST00000549699 147 ntBASIC14.8□□□□□ -0.04
IFNA1P01562 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.8□□□□□ -0.04
IFNA1P01562 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
IFNA1P01562 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.8□□□□□ -0.04
IFNA1P01562 PCDHA12-202ENST00000613593 2588 ntBASIC14.8□□□□□ -0.04
IFNA1P01562 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IFNA1P01562 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.8□□□□□ -0.04
IFNA1P01562 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.8□□□□□ -0.04
IFNA1P01562 AC104417.2-201ENST00000562989 1793 ntBASIC14.8□□□□□ -0.04
IFNA1P01562 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IFNA1P01562 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IFNA1P01562 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 AC084018.2-201ENST00000613093 2607 ntBASIC14.79□□□□□ -0.04
IFNA1P01562 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.79□□□□□ -0.04
IFNA1P01562 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 TNRC18P3-201ENST00000441896 2691 ntBASIC14.79□□□□□ -0.04
IFNA1P01562 YBX1P1-201ENST00000445822 960 ntBASIC14.79□□□□□ -0.04
IFNA1P01562 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.79□□□□□ -0.04
IFNA1P01562 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
IFNA1P01562 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.79□□□□□ -0.04
IFNA1P01562 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 AL136162.1-201ENST00000607711 1078 ntBASIC14.79□□□□□ -0.04
IFNA1P01562 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
IFNA1P01562 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
IFNA1P01562 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IFNA1P01562 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.78□□□□□ -0.04
IFNA1P01562 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
IFNA1P01562 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.78□□□□□ -0.04
IFNA1P01562 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 AC019069.1-201ENST00000610008 1333 ntBASIC14.78□□□□□ -0.04
IFNA1P01562 AC135279.3-201ENST00000610945 1311 ntBASIC14.78□□□□□ -0.04
IFNA1P01562 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.78□□□□□ -0.04
IFNA1P01562 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.78□□□□□ -0.04
IFNA1P01562 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.78□□□□□ -0.04
IFNA1P01562 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms