RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 NISCHQ9Y2I1 1504 aa35.46■■■■□ 3.27
CHUK-201ENST00000370397 SHROOM4Q9ULL8 1493 aa30.3■■■□□ 2.44
CHUK-201ENST00000370397 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
CHUK-201ENST00000370397 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
CHUK-201ENST00000370397 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
CHUK-201ENST00000370397 SUPT5HO00267 1087 aaKnown RBP29.86■■■□□ 2.37
CHUK-201ENST00000370397 HRCP23327 699 aa29.64■■■□□ 2.33
CHUK-201ENST00000370397 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
CHUK-201ENST00000370397 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
CHUK-201ENST00000370397 PCGF6Q9BYE7 350 aa29.06■■■□□ 2.24
CHUK-201ENST00000370397 PPARGC1BQ86YN6 1023 aaKnown RBP28.92■■■□□ 2.22
CHUK-201ENST00000370397 LOC105371045A0A1W2PR82 267 aa28.66■■■□□ 2.18
CHUK-201ENST00000370397 ABCC9O60706 1549 aa28.64■■■□□ 2.18
CHUK-201ENST00000370397 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
CHUK-201ENST00000370397 TRIM26Q12899 539 aaPredicted RBP28.43■■■□□ 2.14
CHUK-201ENST00000370397 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
CHUK-201ENST00000370397 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
CHUK-201ENST00000370397 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
CHUK-201ENST00000370397 NACADO15069 1562 aa27.95■■■□□ 2.06
CHUK-201ENST00000370397 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
CHUK-201ENST00000370397 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
CHUK-201ENST00000370397 SCAF1Q9H7N4 1312 aaKnown RBP27.73■■■□□ 2.03
CHUK-201ENST00000370397 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.02
CHUK-201ENST00000370397 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
CHUK-201ENST00000370397 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
CHUK-201ENST00000370397 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
CHUK-201ENST00000370397 WIZO95785 1651 aa27.55■■■□□ 2
CHUK-201ENST00000370397 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
CHUK-201ENST00000370397 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.98
CHUK-201ENST00000370397 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
CHUK-201ENST00000370397 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
CHUK-201ENST00000370397 EHMT2Q96KQ7 1210 aa27.19■■□□□ 1.94
CHUK-201ENST00000370397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.15■■□□□ 1.94
CHUK-201ENST00000370397 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
CHUK-201ENST00000370397 NEUROD1Q13562 356 aa27.11■■□□□ 1.93
CHUK-201ENST00000370397 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
CHUK-201ENST00000370397 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
CHUK-201ENST00000370397 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
CHUK-201ENST00000370397 SMARCA2P51531 1590 aa27■■□□□ 1.91
CHUK-201ENST00000370397 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
CHUK-201ENST00000370397 BICRAQ9NZM4 1560 aa26.96■■□□□ 1.91
CHUK-201ENST00000370397 CEP162Q5TB80 1403 aa26.95■■□□□ 1.9
CHUK-201ENST00000370397 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
CHUK-201ENST00000370397 DIEXFQ68CQ4 756 aaKnown RBP26.88■■□□□ 1.89
CHUK-201ENST00000370397 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
CHUK-201ENST00000370397 SOGA1O94964 1423 aa26.85■■□□□ 1.89
CHUK-201ENST00000370397 GTF3C3Q9Y5Q9 886 aa26.78■■□□□ 1.88
CHUK-201ENST00000370397 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
CHUK-201ENST00000370397 EEA1Q15075 1411 aa26.72■■□□□ 1.87
CHUK-201ENST00000370397 CENPBP07199 599 aaPredicted RBP26.63■■□□□ 1.85
CHUK-201ENST00000370397 GOLGA3Q08378 1498 aa26.58■■□□□ 1.85
CHUK-201ENST00000370397 KIF21BO75037 1637 aa26.56■■□□□ 1.84
CHUK-201ENST00000370397 ZNF316A6NFI3 1004 aaPredicted RBP26.56■■□□□ 1.84
CHUK-201ENST00000370397 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
CHUK-201ENST00000370397 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
CHUK-201ENST00000370397 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
CHUK-201ENST00000370397 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
CHUK-201ENST00000370397 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
CHUK-201ENST00000370397 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
CHUK-201ENST00000370397 MIER1Q8N108 512 aa26.33■■□□□ 1.81
CHUK-201ENST00000370397 CLIP1P30622 1438 aa26.3■■□□□ 1.8
CHUK-201ENST00000370397 VPS8Q8N3P4 1428 aa26.3■■□□□ 1.8
CHUK-201ENST00000370397 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
CHUK-201ENST00000370397 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
CHUK-201ENST00000370397 MYT1Q01538 1121 aa26.27■■□□□ 1.8
CHUK-201ENST00000370397 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
CHUK-201ENST00000370397 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
CHUK-201ENST00000370397 HNRNPUL2Q1KMD3 747 aaKnown RBP26.11■■□□□ 1.77
CHUK-201ENST00000370397 TOP2BQ02880 1626 aa26.08■■□□□ 1.77
CHUK-201ENST00000370397 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
CHUK-201ENST00000370397 DHX57Q6P158 1386 aaKnown RBP26.02■■□□□ 1.76
CHUK-201ENST00000370397 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
CHUK-201ENST00000370397 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
CHUK-201ENST00000370397 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
CHUK-201ENST00000370397 CLSPNQ9HAW4 1339 aa25.98■■□□□ 1.75
CHUK-201ENST00000370397 CUX2O14529 1486 aa25.94■■□□□ 1.74
CHUK-201ENST00000370397 PRXQ9BXM0 1461 aa25.93■■□□□ 1.74
CHUK-201ENST00000370397 RRBP1Q9P2E9 1410 aaKnown RBP25.87■■□□□ 1.73
CHUK-201ENST00000370397 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
CHUK-201ENST00000370397 SUPT16HQ9Y5B9 1047 aaKnown RBP25.77■■□□□ 1.72
CHUK-201ENST00000370397 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
CHUK-201ENST00000370397 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
CHUK-201ENST00000370397 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
CHUK-201ENST00000370397 MAPKBP1O60336 1514 aa25.68■■□□□ 1.7
CHUK-201ENST00000370397 CUX1P39880 1505 aa25.68■■□□□ 1.7
CHUK-201ENST00000370397 APLP2Q06481 763 aa25.67■■□□□ 1.7
CHUK-201ENST00000370397 ARHGAP35Q9NRY4 1499 aa25.62■■□□□ 1.69
CHUK-201ENST00000370397 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
CHUK-201ENST00000370397 RANGAP1P46060 587 aaPredicted RBP25.54■■□□□ 1.68
CHUK-201ENST00000370397 TSHZ2Q9NRE2 1034 aa25.52■■□□□ 1.68
CHUK-201ENST00000370397 MAP3K1Q13233 1512 aa25.5■■□□□ 1.67
CHUK-201ENST00000370397 TIAM1Q13009 1591 aa25.47■■□□□ 1.67
CHUK-201ENST00000370397 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
CHUK-201ENST00000370397 KCNH8Q96L42 1107 aa25.44■■□□□ 1.66
CHUK-201ENST00000370397 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
CHUK-201ENST00000370397 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
CHUK-201ENST00000370397 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
CHUK-201ENST00000370397 CFAP43Q8NDM7 1665 aa25.38■■□□□ 1.65
CHUK-201ENST00000370397 CFTRP13569 1480 aa25.37■■□□□ 1.65
CHUK-201ENST00000370397 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms