RNA–Protein interactions for RNA: ENST00000542322.5

GRAMD2B-218, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-218ENST00000542322 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
GRAMD2B-218ENST00000542322 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
GRAMD2B-218ENST00000542322 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.73
GRAMD2B-218ENST00000542322 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
GRAMD2B-218ENST00000542322 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
GRAMD2B-218ENST00000542322 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
GRAMD2B-218ENST00000542322 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
GRAMD2B-218ENST00000542322 ABCC9O60706 1549 aa30.12■■■□□ 2.41
GRAMD2B-218ENST00000542322 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
GRAMD2B-218ENST00000542322 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
GRAMD2B-218ENST00000542322 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
GRAMD2B-218ENST00000542322 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
GRAMD2B-218ENST00000542322 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
GRAMD2B-218ENST00000542322 FAM9AQ8IZU1 332 aaPredicted RBP29.52■■■□□ 2.32
GRAMD2B-218ENST00000542322 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
GRAMD2B-218ENST00000542322 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
GRAMD2B-218ENST00000542322 TRIM41Q8WV44 630 aa29.32■■■□□ 2.28
GRAMD2B-218ENST00000542322 CECR2Q9BXF3 1484 aa29.32■■■□□ 2.28
GRAMD2B-218ENST00000542322 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
GRAMD2B-218ENST00000542322 NACADO15069 1562 aa29.18■■■□□ 2.26
GRAMD2B-218ENST00000542322 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
GRAMD2B-218ENST00000542322 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
GRAMD2B-218ENST00000542322 HRCP23327 699 aa28.92■■■□□ 2.22
GRAMD2B-218ENST00000542322 WIZO95785 1651 aa28.92■■■□□ 2.22
GRAMD2B-218ENST00000542322 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
GRAMD2B-218ENST00000542322 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
GRAMD2B-218ENST00000542322 TTBK1Q5TCY1 1321 aaPredicted RBP28.55■■■□□ 2.16
GRAMD2B-218ENST00000542322 BAZ1AQ9NRL2 1556 aaPredicted RBP28.52■■■□□ 2.16
GRAMD2B-218ENST00000542322 UNC13AQ9UPW8 1703 aa28.42■■■□□ 2.14
GRAMD2B-218ENST00000542322 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
GRAMD2B-218ENST00000542322 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
GRAMD2B-218ENST00000542322 CCDC88BA6NC98 1476 aa28.32■■■□□ 2.12
GRAMD2B-218ENST00000542322 TOP2AP11388 1531 aaKnown RBP28.2■■■□□ 2.11
GRAMD2B-218ENST00000542322 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
GRAMD2B-218ENST00000542322 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
GRAMD2B-218ENST00000542322 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
GRAMD2B-218ENST00000542322 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
GRAMD2B-218ENST00000542322 SOGA1O94964 1423 aa28.08■■■□□ 2.09
GRAMD2B-218ENST00000542322 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
GRAMD2B-218ENST00000542322 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
GRAMD2B-218ENST00000542322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
GRAMD2B-218ENST00000542322 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
GRAMD2B-218ENST00000542322 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
GRAMD2B-218ENST00000542322 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
GRAMD2B-218ENST00000542322 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
GRAMD2B-218ENST00000542322 CCER1Q8TC90 406 aaPredicted RBP27.75■■■□□ 2.03
GRAMD2B-218ENST00000542322 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
GRAMD2B-218ENST00000542322 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
GRAMD2B-218ENST00000542322 SYNJ1O43426 1573 aa27.56■■■□□ 2
GRAMD2B-218ENST00000542322 TNIKQ9UKE5 1360 aa27.52■■■□□ 2
GRAMD2B-218ENST00000542322 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
GRAMD2B-218ENST00000542322 PEG3Q9GZU2 1588 aa27.46■■□□□ 1.99
GRAMD2B-218ENST00000542322 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
GRAMD2B-218ENST00000542322 EEA1Q15075 1411 aa27.39■■□□□ 1.98
GRAMD2B-218ENST00000542322 APLP2Q06481 763 aa27.36■■□□□ 1.97
GRAMD2B-218ENST00000542322 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
GRAMD2B-218ENST00000542322 CLIP1P30622 1438 aa27.3■■□□□ 1.96
GRAMD2B-218ENST00000542322 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
GRAMD2B-218ENST00000542322 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
GRAMD2B-218ENST00000542322 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
GRAMD2B-218ENST00000542322 ITGAEP38570 1179 aa27.02■■□□□ 1.92
GRAMD2B-218ENST00000542322 KIF21BO75037 1637 aa27.02■■□□□ 1.92
GRAMD2B-218ENST00000542322 CUX1P39880 1505 aa27.02■■□□□ 1.92
GRAMD2B-218ENST00000542322 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
GRAMD2B-218ENST00000542322 ATP1B4Q9UN42 357 aaPredicted RBP26.98■■□□□ 1.91
GRAMD2B-218ENST00000542322 HMGXB3Q12766 1538 aa26.95■■□□□ 1.9
GRAMD2B-218ENST00000542322 P3H3Q8IVL6 736 aa26.94■■□□□ 1.9
GRAMD2B-218ENST00000542322 KANK4Q5T7N3 995 aaPredicted RBP26.94■■□□□ 1.9
GRAMD2B-218ENST00000542322 DIEXFQ68CQ4 756 aaKnown RBP26.92■■□□□ 1.9
GRAMD2B-218ENST00000542322 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
GRAMD2B-218ENST00000542322 CFTRP13569 1480 aa26.89■■□□□ 1.89
GRAMD2B-218ENST00000542322 CUX2O14529 1486 aa26.85■■□□□ 1.89
GRAMD2B-218ENST00000542322 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.89
GRAMD2B-218ENST00000542322 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
GRAMD2B-218ENST00000542322 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
GRAMD2B-218ENST00000542322 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
GRAMD2B-218ENST00000542322 DNAJC5BQ9UF47 199 aa26.75■■□□□ 1.87
GRAMD2B-218ENST00000542322 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
GRAMD2B-218ENST00000542322 YTHDC1Q96MU7 727 aaKnown RBP26.74■■□□□ 1.87
GRAMD2B-218ENST00000542322 NESP48681 1621 aa26.7■■□□□ 1.86
GRAMD2B-218ENST00000542322 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
GRAMD2B-218ENST00000542322 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
GRAMD2B-218ENST00000542322 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
GRAMD2B-218ENST00000542322 IGF1RP08069 1367 aa26.65■■□□□ 1.86
GRAMD2B-218ENST00000542322 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
GRAMD2B-218ENST00000542322 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
GRAMD2B-218ENST00000542322 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
GRAMD2B-218ENST00000542322 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
GRAMD2B-218ENST00000542322 ARHGAP35Q9NRY4 1499 aa26.57■■□□□ 1.84
GRAMD2B-218ENST00000542322 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
GRAMD2B-218ENST00000542322 FAM50AQ14320 339 aaKnown RBP26.54■■□□□ 1.84
GRAMD2B-218ENST00000542322 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
GRAMD2B-218ENST00000542322 MIER1Q8N108 512 aa26.42■■□□□ 1.82
GRAMD2B-218ENST00000542322 ACIN1Q9UKV3 1341 aaKnown RBP26.4■■□□□ 1.82
GRAMD2B-218ENST00000542322 ARID3CA6NKF2 412 aa26.37■■□□□ 1.81
GRAMD2B-218ENST00000542322 FHOD3Q2V2M9 1422 aa26.37■■□□□ 1.81
GRAMD2B-218ENST00000542322 CCNB3Q8WWL7 1395 aa26.37■■□□□ 1.81
GRAMD2B-218ENST00000542322 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
GRAMD2B-218ENST00000542322 DHX57Q6P158 1386 aaKnown RBP26.34■■□□□ 1.81
GRAMD2B-218ENST00000542322 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms