RNA–Protein interactions for RNA: ENST00000334000.7

C5orf38-201, Transcript of chromosome 5 open reading frame 38, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C5orf38, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-201ENST00000334000 NISCHQ9Y2I1 1504 aa53.34■■■■■ 6.13
C5orf38-201ENST00000334000 CCDC180Q9P1Z9 1646 aa47.7■■■■■ 5.23
C5orf38-201ENST00000334000 ABCC9O60706 1549 aa47.51■■■■■ 5.2
C5orf38-201ENST00000334000 RB1CC1Q8TDY2 1594 aa45.24■■■■■ 4.83
C5orf38-201ENST00000334000 NACADO15069 1562 aa45.01■■■■■ 4.8
C5orf38-201ENST00000334000 DCAF8L2P0C7V8 631 aa44.85■■■■■ 4.77
C5orf38-201ENST00000334000 MYO15BQ96JP2 1530 aa44.45■■■■■ 4.71
C5orf38-201ENST00000334000 DNAJC5BQ9UF47 199 aa44.4■■■■■ 4.7
C5orf38-201ENST00000334000 UNC13AQ9UPW8 1703 aa44.4■■■■■ 4.7
C5orf38-201ENST00000334000 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
C5orf38-201ENST00000334000 PABPN1Q86U42 306 aaKnown RBP eCLIP44.28■■■■■ 4.68
C5orf38-201ENST00000334000 BICRAQ9NZM4 1560 aa44.06■■■■■ 4.64
C5orf38-201ENST00000334000 DCAF1Q9Y4B6 1507 aa44.01■■■■■ 4.64
C5orf38-201ENST00000334000 SCRIBQ14160 1630 aa43.57■■■■■ 4.57
C5orf38-201ENST00000334000 SHROOM4Q9ULL8 1493 aa43.28■■■■■ 4.52
C5orf38-201ENST00000334000 CC2D2AQ9P2K1 1620 aa42.92■■■■■ 4.46
C5orf38-201ENST00000334000 EIF4G1Q04637 1599 aaKnown RBP42.88■■■■■ 4.45
C5orf38-201ENST00000334000 CECR2Q9BXF3 1484 aa42.71■■■■■ 4.43
C5orf38-201ENST00000334000 NCAPD3P42695 1498 aa41.57■■■■■ 4.25
C5orf38-201ENST00000334000 SMARCA4P51532 1647 aa41.57■■■■■ 4.25
C5orf38-201ENST00000334000 ATAD2BQ9ULI0 1458 aa41.53■■■■■ 4.24
C5orf38-201ENST00000334000 SMARCA2P51531 1590 aa41.35■■■■■ 4.21
C5orf38-201ENST00000334000 BAZ1AQ9NRL2 1556 aaPredicted RBP41.33■■■■■ 4.21
C5orf38-201ENST00000334000 HMGXB3Q12766 1538 aa41.28■■■■■ 4.2
C5orf38-201ENST00000334000 MROH2BQ7Z745 1585 aa41.17■■■■■ 4.18
C5orf38-201ENST00000334000 PEG3Q9GZU2 1588 aa41.12■■■■■ 4.17
C5orf38-201ENST00000334000 BAZ1BQ9UIG0 1483 aaKnown RBP41.09■■■■■ 4.17
C5orf38-201ENST00000334000 NESP48681 1621 aa40.94■■■■■ 4.14
C5orf38-201ENST00000334000 ERCC6Q03468 1493 aa40.89■■■■■ 4.14
C5orf38-201ENST00000334000 CUX2O14529 1486 aa40.71■■■■■ 4.11
C5orf38-201ENST00000334000 WIZO95785 1651 aa40.7■■■■■ 4.11
C5orf38-201ENST00000334000 LAMC3Q9Y6N6 1575 aa40.57■■■■■ 4.08
C5orf38-201ENST00000334000 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
C5orf38-201ENST00000334000 DNAJC5Q9H3Z4 198 aa40.41■■■■■ 4.06
C5orf38-201ENST00000334000 KIF21AQ7Z4S6 1674 aa40.4■■■■■ 4.06
C5orf38-201ENST00000334000 RSF1Q96T23 1441 aaPredicted RBP40.38■■■■■ 4.05
C5orf38-201ENST00000334000 CADPSQ9ULU8 1353 aa40.31■■■■■ 4.04
C5orf38-201ENST00000334000 PDS5BQ9NTI5 1447 aa40.27■■■■■ 4.04
C5orf38-201ENST00000334000 TOP2AP11388 1531 aaKnown RBP40.13■■■■■ 4.01
C5orf38-201ENST00000334000 MRC2Q9UBG0 1479 aa39.98■■■■□ 3.99
C5orf38-201ENST00000334000 CFTRP13569 1480 aa39.94■■■■□ 3.98
C5orf38-201ENST00000334000 WDR62O43379 1518 aa39.9■■■■□ 3.98
C5orf38-201ENST00000334000 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.97
C5orf38-201ENST00000334000 CEP164Q9UPV0 1460 aa39.87■■■■□ 3.97
C5orf38-201ENST00000334000 CCDC88BA6NC98 1476 aa39.7■■■■□ 3.95
C5orf38-201ENST00000334000 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
C5orf38-201ENST00000334000 PRDM2Q13029 1718 aa39.59■■■■□ 3.93
C5orf38-201ENST00000334000 TOPBP1Q92547 1522 aa39.19■■■■□ 3.86
C5orf38-201ENST00000334000 ZNF608Q9ULD9 1512 aaPredicted RBP39.08■■■■□ 3.85
C5orf38-201ENST00000334000 IFT140Q96RY7 1462 aa39.05■■■■□ 3.84
C5orf38-201ENST00000334000 DNMBPQ6XZF7 1577 aa39.04■■■■□ 3.84
C5orf38-201ENST00000334000 ABCC8Q09428 1581 aa38.98■■■■□ 3.83
C5orf38-201ENST00000334000 OSCARQ8IYS5 282 aa38.89■■■■□ 3.82
C5orf38-201ENST00000334000 TARBP1Q13395 1621 aaKnown RBP38.84■■■■□ 3.81
C5orf38-201ENST00000334000 EIF4G3O43432 1585 aaKnown RBP38.83■■■■□ 3.81
C5orf38-201ENST00000334000 POLA1P09884 1462 aaPredicted RBP38.8■■■■□ 3.8
C5orf38-201ENST00000334000 SUPT5HO00267 1087 aaKnown RBP38.78■■■■□ 3.8
C5orf38-201ENST00000334000 TRIM41Q8WV44 630 aa38.78■■■■□ 3.8
C5orf38-201ENST00000334000 AQRO60306 1485 aaKnown RBP eCLIP38.73■■■■□ 3.79
C5orf38-201ENST00000334000 RAD54L2Q9Y4B4 1467 aa38.7■■■■□ 3.79
C5orf38-201ENST00000334000 CUX1P39880 1505 aa38.65■■■■□ 3.78
C5orf38-201ENST00000334000 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
C5orf38-201ENST00000334000 SOGA1O94964 1423 aa38.58■■■■□ 3.77
C5orf38-201ENST00000334000 CHD1O14646 1710 aa38.53■■■■□ 3.76
C5orf38-201ENST00000334000 TDRD9Q8NDG6 1382 aaKnown RBP38.52■■■■□ 3.76
C5orf38-201ENST00000334000 RIMBP3CA6NJZ7 1639 aa38.48■■■■□ 3.75
C5orf38-201ENST00000334000 RIMBP3BA6NNM3 1639 aa38.48■■■■□ 3.75
C5orf38-201ENST00000334000 RIMBP3Q9UFD9 1639 aa38.48■■■■□ 3.75
C5orf38-201ENST00000334000 WDR97A6NE52 1622 aa38.36■■■■□ 3.73
C5orf38-201ENST00000334000 ARHGEF11O15085 1522 aa38.36■■■■□ 3.73
C5orf38-201ENST00000334000 FBLN2P98095 1184 aa38.33■■■■□ 3.73
C5orf38-201ENST00000334000 SNAPC4Q5SXM2 1469 aa38.32■■■■□ 3.72
C5orf38-201ENST00000334000 GRIN2BQ13224 1484 aa38.2■■■■□ 3.71
C5orf38-201ENST00000334000 MAGI1Q96QZ7 1491 aaPredicted RBP38.16■■■■□ 3.7
C5orf38-201ENST00000334000 PBRM1Q86U86 1689 aa38.15■■■■□ 3.7
C5orf38-201ENST00000334000 ABCA10Q8WWZ4 1543 aa38.15■■■■□ 3.7
C5orf38-201ENST00000334000 GAPVD1Q14C86 1478 aa38.13■■■■□ 3.69
C5orf38-201ENST00000334000 ABCA5Q8WWZ7 1642 aa38.11■■■■□ 3.69
C5orf38-201ENST00000334000 SYNJ1O43426 1573 aa38.09■■■■□ 3.69
C5orf38-201ENST00000334000 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
C5orf38-201ENST00000334000 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
C5orf38-201ENST00000334000 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
C5orf38-201ENST00000334000 TOP2BQ02880 1626 aa38.05■■■■□ 3.68
C5orf38-201ENST00000334000 SYNJ2O15056 1496 aa38.04■■■■□ 3.68
C5orf38-201ENST00000334000 WRNQ14191 1432 aaPredicted RBP eCLIP38.04■■■■□ 3.68
C5orf38-201ENST00000334000 ARAP1Q96P48 1450 aa38.03■■■■□ 3.68
C5orf38-201ENST00000334000 CYB5RLQ6IPT4 315 aa38.02■■■■□ 3.68
C5orf38-201ENST00000334000 ADAMTS12P58397 1594 aa37.8■■■■□ 3.64
C5orf38-201ENST00000334000 GRIN2AQ12879 1464 aa37.75■■■■□ 3.63
C5orf38-201ENST00000334000 CEP170Q5SW79 1584 aa37.66■■■■□ 3.62
C5orf38-201ENST00000334000 ERICH3Q5RHP9 1530 aa37.64■■■■□ 3.62
C5orf38-201ENST00000334000 FHAD1B1AJZ9 1412 aa37.63■■■■□ 3.61
C5orf38-201ENST00000334000 NUP160Q12769 1436 aa37.62■■■■□ 3.61
C5orf38-201ENST00000334000 ERCC6L2Q5T890 1561 aa37.59■■■■□ 3.61
C5orf38-201ENST00000334000 TRHP20396 242 aaPredicted RBP37.45■■■■□ 3.59
C5orf38-201ENST00000334000 SHROOM2Q13796 1616 aa37.44■■■■□ 3.58
C5orf38-201ENST00000334000 IGF1RP08069 1367 aa37.28■■■■□ 3.56
C5orf38-201ENST00000334000 KIF27Q86VH2 1401 aa37.26■■■■□ 3.55
C5orf38-201ENST00000334000 RUSC2Q8N2Y8 1516 aa37.26■■■■□ 3.55
C5orf38-201ENST00000334000 PRG4Q92954 1404 aaPredicted RBP37.21■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms