Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 MIR6786-201ENST00000616843 113 ntBASIC19.16■□□□□ 0.66
SCG3Q8WXD2 AC005363.2-201ENST00000618631 242 ntBASIC19.16■□□□□ 0.66
SCG3Q8WXD2 SDHAP1-207ENST00000440850 2000 ntBASIC19.16■□□□□ 0.66
SCG3Q8WXD2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 LINC01568-207ENST00000641790 1380 ntBASIC19.16■□□□□ 0.66
SCG3Q8WXD2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCG3Q8WXD2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 AL161938.1-201ENST00000569833 2180 ntBASIC19.15■□□□□ 0.66
SCG3Q8WXD2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 TSPY21P-201ENST00000433481 731 ntBASIC19.15■□□□□ 0.66
SCG3Q8WXD2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 KRT18P22-201ENST00000402024 1347 ntBASIC19.15■□□□□ 0.66
SCG3Q8WXD2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCG3Q8WXD2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCG3Q8WXD2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 AL160286.2-201ENST00000567150 934 ntBASIC19.14■□□□□ 0.65
SCG3Q8WXD2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SCG3Q8WXD2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 RCN1P1-201ENST00000400413 996 ntBASIC19.13■□□□□ 0.65
SCG3Q8WXD2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 DGCR10-201ENST00000609839 495 ntBASIC19.13■□□□□ 0.65
SCG3Q8WXD2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 HLA-A-209ENST00000638375 975 ntBASIC19.13■□□□□ 0.65
SCG3Q8WXD2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.13■□□□□ 0.65
SCG3Q8WXD2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms