RNA–Protein interactions for RNA: ENST00000322444.6

KCTD2-201, Transcript of potassium channel tetramerization domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD2, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-201ENST00000322444 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
KCTD2-201ENST00000322444 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
KCTD2-201ENST00000322444 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
KCTD2-201ENST00000322444 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
KCTD2-201ENST00000322444 PELP1Q8IZL8 1130 aaKnown RBP29.84■■■□□ 2.37
KCTD2-201ENST00000322444 HRCP23327 699 aa29.71■■■□□ 2.35
KCTD2-201ENST00000322444 ABCC9O60706 1549 aa29.55■■■□□ 2.32
KCTD2-201ENST00000322444 PPARGC1BQ86YN6 1023 aaKnown RBP29.44■■■□□ 2.3
KCTD2-201ENST00000322444 PCGF6Q9BYE7 350 aa29.39■■■□□ 2.3
KCTD2-201ENST00000322444 EHMT2Q96KQ7 1210 aa29.13■■■□□ 2.25
KCTD2-201ENST00000322444 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
KCTD2-201ENST00000322444 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
KCTD2-201ENST00000322444 MYT1Q01538 1121 aa28.9■■■□□ 2.22
KCTD2-201ENST00000322444 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
KCTD2-201ENST00000322444 FAM9AQ8IZU1 332 aaPredicted RBP28.63■■■□□ 2.17
KCTD2-201ENST00000322444 SCAF1Q9H7N4 1312 aaKnown RBP28.49■■■□□ 2.15
KCTD2-201ENST00000322444 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
KCTD2-201ENST00000322444 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
KCTD2-201ENST00000322444 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
KCTD2-201ENST00000322444 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
KCTD2-201ENST00000322444 ZEB1P37275 1124 aaPredicted RBP27.92■■■□□ 2.06
KCTD2-201ENST00000322444 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
KCTD2-201ENST00000322444 TTBK1Q5TCY1 1321 aaPredicted RBP27.82■■■□□ 2.04
KCTD2-201ENST00000322444 GTF3C3Q9Y5Q9 886 aa27.82■■■□□ 2.04
KCTD2-201ENST00000322444 RANGAP1P46060 587 aaPredicted RBP27.79■■■□□ 2.04
KCTD2-201ENST00000322444 CENPBP07199 599 aaPredicted RBP27.78■■■□□ 2.04
KCTD2-201ENST00000322444 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
KCTD2-201ENST00000322444 ACIN1Q9UKV3 1341 aaKnown RBP27.73■■■□□ 2.03
KCTD2-201ENST00000322444 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
KCTD2-201ENST00000322444 NEUROD1Q13562 356 aa27.66■■■□□ 2.02
KCTD2-201ENST00000322444 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
KCTD2-201ENST00000322444 RSF1Q96T23 1441 aaPredicted RBP27.6■■■□□ 2.01
KCTD2-201ENST00000322444 NACADO15069 1562 aa27.5■■□□□ 1.99
KCTD2-201ENST00000322444 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
KCTD2-201ENST00000322444 YTHDC1Q96MU7 727 aaKnown RBP27.39■■□□□ 1.98
KCTD2-201ENST00000322444 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
KCTD2-201ENST00000322444 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
KCTD2-201ENST00000322444 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
KCTD2-201ENST00000322444 CCER1Q8TC90 406 aaPredicted RBP27.16■■□□□ 1.94
KCTD2-201ENST00000322444 BCL11AQ9H165 835 aa27■■□□□ 1.91
KCTD2-201ENST00000322444 WIZO95785 1651 aa26.99■■□□□ 1.91
KCTD2-201ENST00000322444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.98■■□□□ 1.91
KCTD2-201ENST00000322444 ATP1B4Q9UN42 357 aaPredicted RBP26.74■■□□□ 1.87
KCTD2-201ENST00000322444 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
KCTD2-201ENST00000322444 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.85
KCTD2-201ENST00000322444 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
KCTD2-201ENST00000322444 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
KCTD2-201ENST00000322444 ANP32EQ9BTT0 268 aa26.54■■□□□ 1.84
KCTD2-201ENST00000322444 APLP2Q06481 763 aa26.52■■□□□ 1.84
KCTD2-201ENST00000322444 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
KCTD2-201ENST00000322444 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
KCTD2-201ENST00000322444 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
KCTD2-201ENST00000322444 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
KCTD2-201ENST00000322444 SOGA1O94964 1423 aa26.4■■□□□ 1.82
KCTD2-201ENST00000322444 P3H3Q8IVL6 736 aa26.38■■□□□ 1.81
KCTD2-201ENST00000322444 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
KCTD2-201ENST00000322444 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
KCTD2-201ENST00000322444 ZNF316A6NFI3 1004 aaPredicted RBP26.32■■□□□ 1.8
KCTD2-201ENST00000322444 ITGAEP38570 1179 aa26.31■■□□□ 1.8
KCTD2-201ENST00000322444 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
KCTD2-201ENST00000322444 MIER1Q8N108 512 aa26.27■■□□□ 1.8
KCTD2-201ENST00000322444 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.795e-6■■■■■ 29.2
KCTD2-201ENST00000322444 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
KCTD2-201ENST00000322444 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
KCTD2-201ENST00000322444 PRKCSHP14314 528 aaPredicted RBP26.21■■□□□ 1.79
KCTD2-201ENST00000322444 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
KCTD2-201ENST00000322444 BCANQ96GW7 911 aa26.16■■□□□ 1.78
KCTD2-201ENST00000322444 ERICH6Q7L0X2 663 aa26.13■■□□□ 1.77
KCTD2-201ENST00000322444 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
KCTD2-201ENST00000322444 FBLN2P98095 1184 aa26.09■■□□□ 1.77
KCTD2-201ENST00000322444 TSHZ2Q9NRE2 1034 aa26.04■■□□□ 1.76
KCTD2-201ENST00000322444 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
KCTD2-201ENST00000322444 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
KCTD2-201ENST00000322444 CEP162Q5TB80 1403 aa25.82■■□□□ 1.72
KCTD2-201ENST00000322444 NESP48681 1621 aa25.78■■□□□ 1.72
KCTD2-201ENST00000322444 NEFLP07196 543 aa25.76■■□□□ 1.71
KCTD2-201ENST00000322444 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
KCTD2-201ENST00000322444 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
KCTD2-201ENST00000322444 NCAPD3P42695 1498 aa25.71■■□□□ 1.71
KCTD2-201ENST00000322444 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
KCTD2-201ENST00000322444 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
KCTD2-201ENST00000322444 CLIP1P30622 1438 aa25.66■■□□□ 1.7
KCTD2-201ENST00000322444 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
KCTD2-201ENST00000322444 CUX2O14529 1486 aa25.65■■□□□ 1.7
KCTD2-201ENST00000322444 FKBP8Q14318 412 aa25.65■■□□□ 1.7
KCTD2-201ENST00000322444 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
KCTD2-201ENST00000322444 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
KCTD2-201ENST00000322444 GOLGA3Q08378 1498 aa25.58■■□□□ 1.68
KCTD2-201ENST00000322444 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
KCTD2-201ENST00000322444 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
KCTD2-201ENST00000322444 RBM19Q9Y4C8 960 aaKnown RBP25.54■■□□□ 1.68
KCTD2-201ENST00000322444 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
KCTD2-201ENST00000322444 KANK4Q5T7N3 995 aaPredicted RBP25.48■■□□□ 1.67
KCTD2-201ENST00000322444 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
KCTD2-201ENST00000322444 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
KCTD2-201ENST00000322444 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
KCTD2-201ENST00000322444 EEA1Q15075 1411 aa25.41■■□□□ 1.66
KCTD2-201ENST00000322444 CFTRP13569 1480 aa25.37■■□□□ 1.65
KCTD2-201ENST00000322444 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
KCTD2-201ENST00000322444 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms