RNA–Protein interactions for RNA: ENST00000519303.6

TPD52-211, Transcript of tumor protein D52, humanhuman

TSL 1 (best) BASIC

Gene TPD52, Length 1,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPD52-211ENST00000519303 NISCHQ9Y2I1 1504 aa43.79■■■■■ 4.6
TPD52-211ENST00000519303 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
TPD52-211ENST00000519303 ZCCHC6Q5VYS8 1495 aaKnown RBP36.73■■■■□ 3.47
TPD52-211ENST00000519303 ABCC9O60706 1549 aa36.36■■■■□ 3.41
TPD52-211ENST00000519303 DCAF1Q9Y4B6 1507 aa36.31■■■■□ 3.4
TPD52-211ENST00000519303 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
TPD52-211ENST00000519303 MYO15BQ96JP2 1530 aa36.02■■■■□ 3.36
TPD52-211ENST00000519303 NACADO15069 1562 aa35.82■■■■□ 3.32
TPD52-211ENST00000519303 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
TPD52-211ENST00000519303 SHROOM4Q9ULL8 1493 aa35.34■■■■□ 3.25
TPD52-211ENST00000519303 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
TPD52-211ENST00000519303 UNC13AQ9UPW8 1703 aa34.7■■■■□ 3.15
TPD52-211ENST00000519303 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
TPD52-211ENST00000519303 PABPN1Q86U42 306 aaKnown RBP eCLIP34.19■■■■□ 3.06
TPD52-211ENST00000519303 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
TPD52-211ENST00000519303 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
TPD52-211ENST00000519303 BAZ1AQ9NRL2 1556 aaPredicted RBP33.89■■■■□ 3.02
TPD52-211ENST00000519303 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
TPD52-211ENST00000519303 MROH2BQ7Z745 1585 aa33.74■■■□□ 2.99
TPD52-211ENST00000519303 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
TPD52-211ENST00000519303 WIZO95785 1651 aa33.44■■■□□ 2.94
TPD52-211ENST00000519303 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
TPD52-211ENST00000519303 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
TPD52-211ENST00000519303 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
TPD52-211ENST00000519303 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
TPD52-211ENST00000519303 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
TPD52-211ENST00000519303 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
TPD52-211ENST00000519303 NCAPD3P42695 1498 aa33.02■■■□□ 2.88
TPD52-211ENST00000519303 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
TPD52-211ENST00000519303 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.86
TPD52-211ENST00000519303 CCDC88BA6NC98 1476 aa32.78■■■□□ 2.84
TPD52-211ENST00000519303 CHIC1Q5VXU3 224 aa32.39■■■□□ 2.78
TPD52-211ENST00000519303 CFTRP13569 1480 aa32.2■■■□□ 2.75
TPD52-211ENST00000519303 DNAJC5BQ9UF47 199 aa32.19■■■□□ 2.74
TPD52-211ENST00000519303 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
TPD52-211ENST00000519303 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
TPD52-211ENST00000519303 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
TPD52-211ENST00000519303 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
TPD52-211ENST00000519303 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
TPD52-211ENST00000519303 WRNQ14191 1432 aaPredicted RBP eCLIP31.89■■■□□ 2.7
TPD52-211ENST00000519303 NESP48681 1621 aa31.8■■■□□ 2.68
TPD52-211ENST00000519303 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.68
TPD52-211ENST00000519303 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
TPD52-211ENST00000519303 SYNJ1O43426 1573 aa31.69■■■□□ 2.66
TPD52-211ENST00000519303 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
TPD52-211ENST00000519303 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.66
TPD52-211ENST00000519303 CEP164Q9UPV0 1460 aa31.62■■■□□ 2.65
TPD52-211ENST00000519303 CUX1P39880 1505 aa31.59■■■□□ 2.65
TPD52-211ENST00000519303 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
TPD52-211ENST00000519303 DNMBPQ6XZF7 1577 aa31.46■■■□□ 2.63
TPD52-211ENST00000519303 EEA1Q15075 1411 aa31.41■■■□□ 2.62
TPD52-211ENST00000519303 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
TPD52-211ENST00000519303 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
TPD52-211ENST00000519303 FGD5Q6ZNL6 1462 aa31.31■■■□□ 2.6
TPD52-211ENST00000519303 SOGA1O94964 1423 aa31.3■■■□□ 2.6
TPD52-211ENST00000519303 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
TPD52-211ENST00000519303 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
TPD52-211ENST00000519303 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
TPD52-211ENST00000519303 POLA1P09884 1462 aaPredicted RBP31.2■■■□□ 2.59
TPD52-211ENST00000519303 RUSC2Q8N2Y8 1516 aa31.15■■■□□ 2.58
TPD52-211ENST00000519303 KIF27Q86VH2 1401 aa31.15■■■□□ 2.58
TPD52-211ENST00000519303 CSRNP3Q8WYN3 585 aa31.15■■■□□ 2.58
TPD52-211ENST00000519303 WDR62O43379 1518 aa31.14■■■□□ 2.58
TPD52-211ENST00000519303 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
TPD52-211ENST00000519303 THOC2Q8NI27 1593 aaKnown RBP31.06■■■□□ 2.56
TPD52-211ENST00000519303 CUX2O14529 1486 aa31.06■■■□□ 2.56
TPD52-211ENST00000519303 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
TPD52-211ENST00000519303 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
TPD52-211ENST00000519303 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
TPD52-211ENST00000519303 KIF21BO75037 1637 aa30.93■■■□□ 2.54
TPD52-211ENST00000519303 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
TPD52-211ENST00000519303 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
TPD52-211ENST00000519303 GOLGA3Q08378 1498 aa30.88■■■□□ 2.53
TPD52-211ENST00000519303 PRXQ9BXM0 1461 aa30.83■■■□□ 2.53
TPD52-211ENST00000519303 IGF1RP08069 1367 aa30.83■■■□□ 2.53
TPD52-211ENST00000519303 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
TPD52-211ENST00000519303 ERICH3Q5RHP9 1530 aa30.81■■■□□ 2.52
TPD52-211ENST00000519303 GAPVD1Q14C86 1478 aa30.78■■■□□ 2.52
TPD52-211ENST00000519303 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
TPD52-211ENST00000519303 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
TPD52-211ENST00000519303 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
TPD52-211ENST00000519303 RAPGEF2Q9Y4G8 1499 aa30.71■■■□□ 2.51
TPD52-211ENST00000519303 CUL7Q14999 1698 aa30.71■■■□□ 2.51
TPD52-211ENST00000519303 UBTFP17480 764 aaKnown RBP30.71■■■□□ 2.51
TPD52-211ENST00000519303 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.51
TPD52-211ENST00000519303 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.49
TPD52-211ENST00000519303 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
TPD52-211ENST00000519303 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
TPD52-211ENST00000519303 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
TPD52-211ENST00000519303 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
TPD52-211ENST00000519303 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
TPD52-211ENST00000519303 FHAD1B1AJZ9 1412 aa30.48■■■□□ 2.47
TPD52-211ENST00000519303 ADAMTS12P58397 1594 aa30.43■■■□□ 2.46
TPD52-211ENST00000519303 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
TPD52-211ENST00000519303 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
TPD52-211ENST00000519303 CLIP1P30622 1438 aa30.35■■■□□ 2.45
TPD52-211ENST00000519303 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
TPD52-211ENST00000519303 SYNJ2O15056 1496 aa30.26■■■□□ 2.43
TPD52-211ENST00000519303 GRIN2AQ12879 1464 aa30.2■■■□□ 2.43
TPD52-211ENST00000519303 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms