Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.191e-14■□□□□ 9.5
LSM11P83369 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.131e-14■□□□□ 9.5
LSM11P83369 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.061e-14■□□□□ 9.5
LSM11P83369 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.061e-14■□□□□ 9.5
LSM11P83369 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.531e-14■□□□□ 9.5
LSM11P83369 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.531e-14■□□□□ 9.5
LSM11P83369 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.141e-14■□□□□ 9.5
LSM11P83369 ARF1-208ENST00000478336 930 ntTSL 221.1■□□□□ 0.973e-6■□□□□ 9.5
LSM11P83369 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)19.53■□□□□ 0.726e-8■□□□□ 9.5
LSM11P83369 PTBP1-212ENST00000587136 583 ntTSL 318.46■□□□□ 0.556e-8■□□□□ 9.5
LSM11P83369 RBM14-207ENST00000461478 693 ntTSL 218.22■□□□□ 0.513e-6■□□□□ 9.5
LSM11P83369 PTBP1-207ENST00000585932 1030 ntTSL 318.15■□□□□ 0.56e-8■□□□□ 9.5
LSM11P83369 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.373e-6■□□□□ 9.5
LSM11P83369 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.353e-6■□□□□ 9.5
LSM11P83369 PTBP1-215ENST00000589883 683 ntTSL 317.2■□□□□ 0.346e-8■□□□□ 9.5
LSM11P83369 PTBP1-208ENST00000585956 767 ntTSL 317.06■□□□□ 0.326e-8■□□□□ 9.5
LSM11P83369 PTBP1-219ENST00000621737 1125 ntTSL 516.99■□□□□ 0.316e-8■□□□□ 9.5
LSM11P83369 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.253e-6■□□□□ 9.5
LSM11P83369 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.243e-6■□□□□ 9.5
LSM11P83369 SBNO2-207ENST00000590176 561 ntTSL 416.5■□□□□ 0.233e-6■□□□□ 9.5
LSM11P83369 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.213e-6■□□□□ 9.5
LSM11P83369 CTSB-206ENST00000524500 573 ntTSL 416.26■□□□□ 0.193e-6■□□□□ 9.5
LSM11P83369 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.12■□□□□ 0.172e-10■□□□□ 9.5
LSM11P83369 CTSB-233ENST00000534636 633 ntTSL 416.08■□□□□ 0.163e-6■□□□□ 9.5
LSM11P83369 CTSB-222ENST00000531551 1855 ntTSL 1 (best)15.92■□□□□ 0.143e-6■□□□□ 9.5
LSM11P83369 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.146e-8■□□□□ 9.5
LSM11P83369 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.113e-6■□□□□ 9.5
LSM11P83369 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-6■□□□□ 9.5
LSM11P83369 ARF1-207ENST00000477451 789 ntTSL 515.58■□□□□ 0.083e-6■□□□□ 9.5
LSM11P83369 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.49■□□□□ 0.073e-6■□□□□ 9.5
LSM11P83369 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.063e-6■□□□□ 9.5
LSM11P83369 PHRF1-206ENST00000534320 5178 ntTSL 515.44■□□□□ 0.063e-6■□□□□ 9.5
LSM11P83369 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.012e-10■□□□□ 9.5
LSM11P83369 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 03e-6■□□□□ 9.5
LSM11P83369 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 03e-6■□□□□ 9.5
LSM11P83369 CTSB-226ENST00000532656 573 ntTSL 415.02■□□□□ -03e-6■□□□□ 9.5
LSM11P83369 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.143e-6■□□□□ 9.5
LSM11P83369 CTSB-210ENST00000526195 560 ntTSL 414.11□□□□□ -0.153e-6■□□□□ 9.5
LSM11P83369 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.163e-6■□□□□ 9.5
LSM11P83369 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.173e-6■□□□□ 9.5
LSM11P83369 CTSB-213ENST00000527215 545 ntTSL 413.95□□□□□ -0.183e-6■□□□□ 9.5
LSM11P83369 ARF1-212ENST00000497165 675 ntTSL 313.78□□□□□ -0.23e-6■□□□□ 9.5
LSM11P83369 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.213e-6■□□□□ 9.5
LSM11P83369 ARF1-202ENST00000469235 678 ntTSL 313.63□□□□□ -0.233e-6■□□□□ 9.5
LSM11P83369 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)13.62□□□□□ -0.236e-8■□□□□ 9.5
LSM11P83369 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.233e-6■□□□□ 9.5
LSM11P83369 FURIN-203ENST00000559353 587 ntTSL 313.57□□□□□ -0.243e-6■□□□□ 9.5
LSM11P83369 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.253e-6■□□□□ 9.5
LSM11P83369 CTSB-208ENST00000525076 550 ntTSL 513.31□□□□□ -0.283e-6■□□□□ 9.5
LSM11P83369 CTSB-230ENST00000534149 524 ntTSL 413.15□□□□□ -0.33e-6■□□□□ 9.5
LSM11P83369 ARF1-210ENST00000482962 597 ntTSL 313.14□□□□□ -0.313e-6■□□□□ 9.5
LSM11P83369 CSNK1D-217ENST00000581241 6094 ntTSL 212.85□□□□□ -0.353e-6■□□□□ 9.5
LSM11P83369 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.373e-6■□□□□ 9.5
LSM11P83369 CTSB-224ENST00000532392 570 ntTSL 412.71□□□□□ -0.373e-6■□□□□ 9.5
LSM11P83369 CTSB-231ENST00000534382 764 ntTSL 412.71□□□□□ -0.373e-6■□□□□ 9.5
LSM11P83369 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.62□□□□□ -0.393e-6■□□□□ 9.5
LSM11P83369 CTSB-221ENST00000531502 557 ntTSL 412.61□□□□□ -0.393e-6■□□□□ 9.5
LSM11P83369 CSNK1D-224ENST00000584672 401 ntTSL 312.56□□□□□ -0.43e-6■□□□□ 9.5
LSM11P83369 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.41□□□□□ -0.423e-6■□□□□ 9.5
LSM11P83369 CTSB-217ENST00000530296 561 ntTSL 412.37□□□□□ -0.433e-6■□□□□ 9.5
LSM11P83369 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.493e-6■□□□□ 9.5
LSM11P83369 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.53e-6■□□□□ 9.5
LSM11P83369 ARF1-211ENST00000490705 881 ntTSL 311.68□□□□□ -0.543e-6■□□□□ 9.5
LSM11P83369 ARF1-205ENST00000473546 291 ntTSL 211.59□□□□□ -0.553e-6■□□□□ 9.5
LSM11P83369 RBM14-205ENST00000443702 732 ntTSL 3 BASIC11.41□□□□□ -0.583e-6■□□□□ 9.5
LSM11P83369 ZNF124-205ENST00000491848 701 ntTSL 311.26□□□□□ -0.613e-6■□□□□ 9.5
LSM11P83369 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.673e-6■□□□□ 9.5
LSM11P83369 RBM14-203ENST00000409372 876 ntTSL 2 BASIC10.53□□□□□ -0.723e-6■□□□□ 9.5
LSM11P83369 KEL-205ENST00000470850 705 ntTSL 210.06□□□□□ -0.83e-6■□□□□ 9.5
LSM11P83369 PTBP1-205ENST00000585535 314 ntTSL 39.87□□□□□ -0.836e-8■□□□□ 9.5
LSM11P83369 CTSB-212ENST00000526645 559 ntTSL 49.61□□□□□ -0.873e-6■□□□□ 9.5
LSM11P83369 KEL-207ENST00000478969 351 ntTSL 38.6□□□□□ -1.033e-6■□□□□ 9.5
LSM11P83369 CTSB-205ENST00000505496 540 ntTSL 47.66□□□□□ -1.183e-6■□□□□ 9.5
LSM11P83369 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.021e-30■□□□□ 9.5
LSM11P83369 EIF4A2-215ENST00000467585 570 ntTSL 211.43□□□□□ -0.581e-17■□□□□ 9.5
LSM11P83369 EIF4A2-208ENST00000445596 600 ntTSL 211.29□□□□□ -0.61e-17■□□□□ 9.5
LSM11P83369 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.832e-6■□□□□ 9.5
LSM11P83369 EIF4A2-227ENST00000498746 579 ntTSL 29.73□□□□□ -0.851e-17■□□□□ 9.5
LSM11P83369 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.921e-17■□□□□ 9.5
LSM11P83369 EIF4A2-221ENST00000491473 579 ntTSL 28.82□□□□□ -11e-17■□□□□ 9.5
LSM11P83369 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC8.82□□□□□ -12e-6■□□□□ 9.5
LSM11P83369 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -12e-6■□□□□ 9.5
LSM11P83369 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.73□□□□□ -1.011e-17■□□□□ 9.5
LSM11P83369 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)8.37□□□□□ -1.071e-17■□□□□ 9.5
LSM11P83369 EIF4A2-204ENST00000429589 1005 ntTSL 58.22□□□□□ -1.091e-17■□□□□ 9.5
LSM11P83369 EIF4A2-220ENST00000486805 590 ntTSL 28.05□□□□□ -1.121e-17■□□□□ 9.5
LSM11P83369 EIF4A2-224ENST00000495049 576 ntTSL 28.03□□□□□ -1.121e-17■□□□□ 9.5
LSM11P83369 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.131e-17■□□□□ 9.5
LSM11P83369 EIF4A2-211ENST00000465222 676 ntTSL 27.65□□□□□ -1.181e-17■□□□□ 9.5
LSM11P83369 EIF4A2-218ENST00000475653 909 ntTSL 27.33□□□□□ -1.241e-17■□□□□ 9.5
LSM11P83369 EIF4A2-212ENST00000465267 1054 ntTSL 26.71□□□□□ -1.341e-17■□□□□ 9.5
LSM11P83369 EIF4A2-202ENST00000425053 1977 ntTSL 56.48□□□□□ -1.371e-17■□□□□ 9.5
LSM11P83369 EIF4A2-210ENST00000465032 578 ntTSL 25.51□□□□□ -1.531e-17■□□□□ 9.5
LSM11P83369 EIF4A2-219ENST00000485101 5327 ntTSL 54.03□□□□□ -1.761e-17■□□□□ 9.5
LSM11P83369 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.58e-10■□□□□ 9.5
LSM11P83369 LCAT-204ENST00000570980 1240 ntTSL 216.62■□□□□ 0.256e-7■□□□□ 9.5
LSM11P83369 RTEL1-206ENST00000425905 664 ntTSL 211.61□□□□□ -0.554e-7■□□□□ 9.5
LSM11P83369 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.03■■□□□ 1.61e-7■□□□□ 9.5
LSM11P83369 RBCK1-212ENST00000468272 1486 ntTSL 519.01■□□□□ 0.631e-6■□□□□ 9.5
LSM11P83369 DDX42-215ENST00000582985 543 ntTSL 410.04□□□□□ -0.83e-8■□□□□ 9.5
Retrieved 100 of 11,495 protein–RNA pairs in 53.8 ms