RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
CSNK1D-224ENST00000584672 ABCC9O60706 1549 aa33.52■■■□□ 2.96
CSNK1D-224ENST00000584672 CCDC180Q9P1Z9 1646 aa32.81■■■□□ 2.84
CSNK1D-224ENST00000584672 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
CSNK1D-224ENST00000584672 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
CSNK1D-224ENST00000584672 NACADO15069 1562 aa31.13■■■□□ 2.57
CSNK1D-224ENST00000584672 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.573e-7■■■□□ 17.8
CSNK1D-224ENST00000584672 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
CSNK1D-224ENST00000584672 UNC13AQ9UPW8 1703 aa30.92■■■□□ 2.54
CSNK1D-224ENST00000584672 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
CSNK1D-224ENST00000584672 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
CSNK1D-224ENST00000584672 CC2D2AQ9P2K1 1620 aa30.2■■■□□ 2.43
CSNK1D-224ENST00000584672 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
CSNK1D-224ENST00000584672 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
CSNK1D-224ENST00000584672 SCRIBQ14160 1630 aa30■■■□□ 2.39
CSNK1D-224ENST00000584672 EIF4G1Q04637 1599 aaKnown RBP29.97■■■□□ 2.39
CSNK1D-224ENST00000584672 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
CSNK1D-224ENST00000584672 DCAF1Q9Y4B6 1507 aa29.84■■■□□ 2.37
CSNK1D-224ENST00000584672 DNAJC5Q9H3Z4 198 aa29.67■■■□□ 2.34
CSNK1D-224ENST00000584672 CUX2O14529 1486 aa29■■■□□ 2.23
CSNK1D-224ENST00000584672 ERCC6Q03468 1493 aa28.95■■■□□ 2.22
CSNK1D-224ENST00000584672 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
CSNK1D-224ENST00000584672 NESP48681 1621 aa28.63■■■□□ 2.17
CSNK1D-224ENST00000584672 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
CSNK1D-224ENST00000584672 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
CSNK1D-224ENST00000584672 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
CSNK1D-224ENST00000584672 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
CSNK1D-224ENST00000584672 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
CSNK1D-224ENST00000584672 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
CSNK1D-224ENST00000584672 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
CSNK1D-224ENST00000584672 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
CSNK1D-224ENST00000584672 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
CSNK1D-224ENST00000584672 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
CSNK1D-224ENST00000584672 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
CSNK1D-224ENST00000584672 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
CSNK1D-224ENST00000584672 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
CSNK1D-224ENST00000584672 MRC2Q9UBG0 1479 aa27.9■■■□□ 2.06
CSNK1D-224ENST00000584672 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
CSNK1D-224ENST00000584672 WDR62O43379 1518 aa27.84■■■□□ 2.05
CSNK1D-224ENST00000584672 CEP164Q9UPV0 1460 aa27.69■■■□□ 2.02
CSNK1D-224ENST00000584672 WIZO95785 1651 aa27.68■■■□□ 2.02
CSNK1D-224ENST00000584672 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
CSNK1D-224ENST00000584672 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
CSNK1D-224ENST00000584672 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
CSNK1D-224ENST00000584672 CFTRP13569 1480 aa27.41■■□□□ 1.98
CSNK1D-224ENST00000584672 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
CSNK1D-224ENST00000584672 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
CSNK1D-224ENST00000584672 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
CSNK1D-224ENST00000584672 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
CSNK1D-224ENST00000584672 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
CSNK1D-224ENST00000584672 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
CSNK1D-224ENST00000584672 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
CSNK1D-224ENST00000584672 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
CSNK1D-224ENST00000584672 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
CSNK1D-224ENST00000584672 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
CSNK1D-224ENST00000584672 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
CSNK1D-224ENST00000584672 TOPBP1Q92547 1522 aa27■■□□□ 1.91
CSNK1D-224ENST00000584672 TRHP20396 242 aaPredicted RBP27■■□□□ 1.91
CSNK1D-224ENST00000584672 CHD1O14646 1710 aa26.99■■□□□ 1.91
CSNK1D-224ENST00000584672 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
CSNK1D-224ENST00000584672 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
CSNK1D-224ENST00000584672 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.893e-7■■■■□ 23.2
CSNK1D-224ENST00000584672 FBLN2P98095 1184 aa26.87■■□□□ 1.89
CSNK1D-224ENST00000584672 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
CSNK1D-224ENST00000584672 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
CSNK1D-224ENST00000584672 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
CSNK1D-224ENST00000584672 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
CSNK1D-224ENST00000584672 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
CSNK1D-224ENST00000584672 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
CSNK1D-224ENST00000584672 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
CSNK1D-224ENST00000584672 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
CSNK1D-224ENST00000584672 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
CSNK1D-224ENST00000584672 SOGA1O94964 1423 aa26.55■■□□□ 1.84
CSNK1D-224ENST00000584672 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
CSNK1D-224ENST00000584672 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
CSNK1D-224ENST00000584672 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
CSNK1D-224ENST00000584672 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
CSNK1D-224ENST00000584672 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
CSNK1D-224ENST00000584672 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
CSNK1D-224ENST00000584672 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
CSNK1D-224ENST00000584672 CUX1P39880 1505 aa26.35■■□□□ 1.81
CSNK1D-224ENST00000584672 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
CSNK1D-224ENST00000584672 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
CSNK1D-224ENST00000584672 ERCC6L2Q5T890 1561 aa26.2■■□□□ 1.79
CSNK1D-224ENST00000584672 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
CSNK1D-224ENST00000584672 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
CSNK1D-224ENST00000584672 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
CSNK1D-224ENST00000584672 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
CSNK1D-224ENST00000584672 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
CSNK1D-224ENST00000584672 KIF13AQ9H1H9 1805 aa25.99■■□□□ 1.75
CSNK1D-224ENST00000584672 NUP160Q12769 1436 aa25.96■■□□□ 1.75
CSNK1D-224ENST00000584672 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
CSNK1D-224ENST00000584672 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.737e-7■■■■■ 52.5
CSNK1D-224ENST00000584672 FHAD1B1AJZ9 1412 aa25.83■■□□□ 1.73
CSNK1D-224ENST00000584672 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
CSNK1D-224ENST00000584672 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
CSNK1D-224ENST00000584672 FAM69CQ0P6D2 419 aa25.75■■□□□ 1.71
CSNK1D-224ENST00000584672 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
CSNK1D-224ENST00000584672 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
CSNK1D-224ENST00000584672 ABCC10Q5T3U5 1492 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms