Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.3■■□□□ 1
GPN1Q9HCN4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GPN1Q9HCN4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GPN1Q9HCN4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPN1Q9HCN4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPN1Q9HCN4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.29■■□□□ 1
GPN1Q9HCN4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPN1Q9HCN4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.29■■□□□ 1
GPN1Q9HCN4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPN1Q9HCN4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.28■■□□□ 1
GPN1Q9HCN4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.28■■□□□ 1
GPN1Q9HCN4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GPN1Q9HCN4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GPN1Q9HCN4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GPN1Q9HCN4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.28■■□□□ 1
GPN1Q9HCN4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.27■■□□□ 1
GPN1Q9HCN4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
GPN1Q9HCN4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.27■□□□□ 0.99
GPN1Q9HCN4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
GPN1Q9HCN4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPN1Q9HCN4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GPN1Q9HCN4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GPN1Q9HCN4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPN1Q9HCN4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
GPN1Q9HCN4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GPN1Q9HCN4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.25■□□□□ 0.99
GPN1Q9HCN4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPN1Q9HCN4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GPN1Q9HCN4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPN1Q9HCN4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.23■□□□□ 0.99
GPN1Q9HCN4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPN1Q9HCN4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPN1Q9HCN4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPN1Q9HCN4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPN1Q9HCN4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
GPN1Q9HCN4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
GPN1Q9HCN4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
GPN1Q9HCN4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPN1Q9HCN4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPN1Q9HCN4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
GPN1Q9HCN4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPN1Q9HCN4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPN1Q9HCN4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPN1Q9HCN4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.19■□□□□ 0.98
GPN1Q9HCN4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
GPN1Q9HCN4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
GPN1Q9HCN4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPN1Q9HCN4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPN1Q9HCN4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPN1Q9HCN4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPN1Q9HCN4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPN1Q9HCN4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPN1Q9HCN4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPN1Q9HCN4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.17■□□□□ 0.98
GPN1Q9HCN4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.17■□□□□ 0.98
GPN1Q9HCN4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPN1Q9HCN4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 WASH5P-204ENST00000632292 975 ntBASIC21.16■□□□□ 0.98
GPN1Q9HCN4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.16■□□□□ 0.98
GPN1Q9HCN4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPN1Q9HCN4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPN1Q9HCN4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPN1Q9HCN4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPN1Q9HCN4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GPN1Q9HCN4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPN1Q9HCN4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPN1Q9HCN4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GPN1Q9HCN4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPN1Q9HCN4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.12■□□□□ 0.97
GPN1Q9HCN4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GPN1Q9HCN4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GPN1Q9HCN4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
GPN1Q9HCN4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
GPN1Q9HCN4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPN1Q9HCN4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPN1Q9HCN4 AC092803.2-201ENST00000564287 1899 ntBASIC21.11■□□□□ 0.97
GPN1Q9HCN4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.11■□□□□ 0.97
GPN1Q9HCN4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPN1Q9HCN4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPN1Q9HCN4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GPN1Q9HCN4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPN1Q9HCN4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPN1Q9HCN4 AP002414.2-202ENST00000590929 1450 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms