Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SYNE2Q8WXH0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC10.71□□□□□ -0.7
SYNE2Q8WXH0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC10.71□□□□□ -0.7
SYNE2Q8WXH0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 RARRES2P11-201ENST00000635158 484 ntBASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 AC110285.6-201ENST00000617652 491 ntBASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC10.7□□□□□ -0.7
SYNE2Q8WXH0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 SMPD5-203ENST00000639008 1464 ntBASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 Z92544.1-202ENST00000571933 1220 ntBASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 AC007029.1-201ENST00000604183 313 ntBASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.69□□□□□ -0.7
SYNE2Q8WXH0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 AL031848.2-201ENST00000607670 837 ntBASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC10.68□□□□□ -0.7
SYNE2Q8WXH0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC10.67□□□□□ -0.7
SYNE2Q8WXH0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 ID1-201ENST00000376105 1233 ntBASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC10.66□□□□□ -0.7
SYNE2Q8WXH0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 MIR6765-201ENST00000614092 87 ntBASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC10.65□□□□□ -0.7
SYNE2Q8WXH0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SYNE2Q8WXH0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC10.65□□□□□ -0.71
SYNE2Q8WXH0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 AC131281.2-201ENST00000520478 145 ntBASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.64□□□□□ -0.71
SYNE2Q8WXH0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 MIR6821-201ENST00000617625 74 ntBASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 ECEL1P2-201ENST00000461596 1295 ntBASIC10.63□□□□□ -0.71
SYNE2Q8WXH0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SYNE2Q8WXH0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10.62□□□□□ -0.71
SYNE2Q8WXH0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC10.62□□□□□ -0.71
SYNE2Q8WXH0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SYNE2Q8WXH0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC10.62□□□□□ -0.71
SYNE2Q8WXH0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms